RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 C1orf115Q9H7X2 142 aa18.74■□□□□ 0.59
SCFD2-201ENST00000388940 RGS12O14924 1447 aa18.74■□□□□ 0.59
SCFD2-201ENST00000388940 RBM25P49756 843 aaKnown RBP18.74■□□□□ 0.59
SCFD2-201ENST00000388940 MCM10Q7L590 875 aa18.74■□□□□ 0.59
SCFD2-201ENST00000388940 PTPRCP08575 1304 aa18.73■□□□□ 0.59
SCFD2-201ENST00000388940 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
SCFD2-201ENST00000388940 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
SCFD2-201ENST00000388940 SLKQ9H2G2 1235 aaPredicted RBP18.7■□□□□ 0.58
SCFD2-201ENST00000388940 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
SCFD2-201ENST00000388940 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
SCFD2-201ENST00000388940 HTATSF1O43719 755 aaKnown RBP18.69■□□□□ 0.58
SCFD2-201ENST00000388940 MTHFSDQ2M296 383 aaKnown RBP18.69■□□□□ 0.58
SCFD2-201ENST00000388940 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
SCFD2-201ENST00000388940 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
SCFD2-201ENST00000388940 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
SCFD2-201ENST00000388940 AMPHP49418 695 aa18.68■□□□□ 0.58
SCFD2-201ENST00000388940 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
SCFD2-201ENST00000388940 EYA1Q99502 592 aa18.68■□□□□ 0.58
SCFD2-201ENST00000388940 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
SCFD2-201ENST00000388940 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
SCFD2-201ENST00000388940 ATP10DQ9P241 1426 aa18.67■□□□□ 0.58
SCFD2-201ENST00000388940 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
SCFD2-201ENST00000388940 SOX12O15370 315 aa18.67■□□□□ 0.58
SCFD2-201ENST00000388940 SNX21Q969T3 373 aa18.67■□□□□ 0.58
SCFD2-201ENST00000388940 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
SCFD2-201ENST00000388940 KCNA6P17658 529 aa18.65■□□□□ 0.58
SCFD2-201ENST00000388940 FOXO3O43524 673 aa18.65■□□□□ 0.58
SCFD2-201ENST00000388940 NLRP6P59044 892 aa18.65■□□□□ 0.58
SCFD2-201ENST00000388940 HSCBQ8IWL3 235 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 CHD2O14647 1828 aaKnown RBP18.64■□□□□ 0.57
SCFD2-201ENST00000388940 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 CEP85Q6P2H3 762 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 PLEKHM2Q8IWE5 1019 aa18.64■□□□□ 0.57
SCFD2-201ENST00000388940 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
SCFD2-201ENST00000388940 NCOA3Q9Y6Q9 1424 aa18.63■□□□□ 0.57
SCFD2-201ENST00000388940 HOXC9P31274 260 aa18.63■□□□□ 0.57
SCFD2-201ENST00000388940 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
SCFD2-201ENST00000388940 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
SCFD2-201ENST00000388940 MSH6P52701 1360 aa18.62■□□□□ 0.57
SCFD2-201ENST00000388940 SOS1Q07889 1333 aaPredicted RBP18.62■□□□□ 0.57
SCFD2-201ENST00000388940 CDC45O75419 566 aa18.61■□□□□ 0.57
SCFD2-201ENST00000388940 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
SCFD2-201ENST00000388940 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
SCFD2-201ENST00000388940 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
SCFD2-201ENST00000388940 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
SCFD2-201ENST00000388940 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
SCFD2-201ENST00000388940 KIF2CQ99661 725 aa18.59■□□□□ 0.57
SCFD2-201ENST00000388940 GSPT1P15170 499 aaKnown RBP18.59■□□□□ 0.57
SCFD2-201ENST00000388940 TTC22Q5TAA0 569 aa18.59■□□□□ 0.57
SCFD2-201ENST00000388940 MEIS3Q99687 375 aa18.58■□□□□ 0.57
SCFD2-201ENST00000388940 FAM208AQ9UK61 1670 aaKnown RBP18.58■□□□□ 0.57
SCFD2-201ENST00000388940 DDIT3P35638 169 aa18.58■□□□□ 0.56
SCFD2-201ENST00000388940 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
SCFD2-201ENST00000388940 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
SCFD2-201ENST00000388940 G2E3Q7L622 706 aa18.57■□□□□ 0.56
SCFD2-201ENST00000388940 MAP3K5Q99683 1374 aa18.57■□□□□ 0.56
SCFD2-201ENST00000388940 LTN1O94822 1766 aa18.56■□□□□ 0.56
SCFD2-201ENST00000388940 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
SCFD2-201ENST00000388940 HMMRO75330 724 aa18.56■□□□□ 0.56
SCFD2-201ENST00000388940 SPRYD3Q8NCJ5 442 aa18.56■□□□□ 0.56
SCFD2-201ENST00000388940 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
SCFD2-201ENST00000388940 MCM4P33991 863 aa18.55■□□□□ 0.56
SCFD2-201ENST00000388940 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
SCFD2-201ENST00000388940 PHF8Q9UPP1 1060 aa18.55■□□□□ 0.56
SCFD2-201ENST00000388940 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
SCFD2-201ENST00000388940 CIZ1Q9ULV3 898 aaPredicted RBP18.54■□□□□ 0.56
SCFD2-201ENST00000388940 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
SCFD2-201ENST00000388940 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
SCFD2-201ENST00000388940 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
SCFD2-201ENST00000388940 NUTM2GQ5VZR2 741 aa18.53■□□□□ 0.56
SCFD2-201ENST00000388940 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
SCFD2-201ENST00000388940 NFAT5O94916 1531 aa18.52■□□□□ 0.56
SCFD2-201ENST00000388940 IP6K1Q92551 441 aa18.52■□□□□ 0.56
SCFD2-201ENST00000388940 F6X3S4 739 aa18.51■□□□□ 0.55
SCFD2-201ENST00000388940 FLIIQ13045 1269 aa18.51■□□□□ 0.55
SCFD2-201ENST00000388940 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
SCFD2-201ENST00000388940 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
SCFD2-201ENST00000388940 GNAI2P04899 355 aa18.51■□□□□ 0.55
SCFD2-201ENST00000388940 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
SCFD2-201ENST00000388940 HSP90AB1P08238 724 aaKnown RBP18.5■□□□□ 0.55
SCFD2-201ENST00000388940 GNAI3P08754 354 aa18.5■□□□□ 0.55
SCFD2-201ENST00000388940 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
SCFD2-201ENST00000388940 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
SCFD2-201ENST00000388940 OTUD7AQ8TE49 926 aaPredicted RBP18.49■□□□□ 0.55
SCFD2-201ENST00000388940 CEMIPQ8WUJ3 1361 aa18.49■□□□□ 0.55
SCFD2-201ENST00000388940 SDSP20132 328 aa18.49■□□□□ 0.55
SCFD2-201ENST00000388940 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
SCFD2-201ENST00000388940 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
SCFD2-201ENST00000388940 SMARCA5O60264 1052 aaPredicted RBP18.48■□□□□ 0.55
SCFD2-201ENST00000388940 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
SCFD2-201ENST00000388940 USP26Q9BXU7 913 aa18.48■□□□□ 0.55
SCFD2-201ENST00000388940 KCNH5Q8NCM2 988 aa18.47■□□□□ 0.55
SCFD2-201ENST00000388940 LTV1Q96GA3 475 aaPredicted RBP18.47■□□□□ 0.55
SCFD2-201ENST00000388940 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
SCFD2-201ENST00000388940 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
SCFD2-201ENST00000388940 RABEP1Q15276 862 aa18.47■□□□□ 0.55
SCFD2-201ENST00000388940 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms