RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 SOS2Q07890 1332 aaPredicted RBP2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 ADAMTS12P58397 1594 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 USP6P35125 1406 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 PLEKHD1A6NEE1 506 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 EIF4E1BA6NMX2 242 aaKnown RBP2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 PLEKHG5O94827 1062 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 BCAMP50895 628 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 TRPM4Q8TD43 1214 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 STAG3Q9UJ98 1225 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 KIF15Q9NS87 1388 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 TIAM1Q13009 1591 aa2.19□□□□□ -2.06
RNU6-42P-201ENST00000384165 EEA1Q15075 1411 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 MIA2Q96PC5 1412 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 PIEZO2Q9H5I5 2752 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 POTECB2RU33 542 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 ZBTB7BO15156 539 aaPredicted RBP2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 CAMTA2O94983 1202 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 BMP8BP34820 402 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 PRKG1Q13976 671 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 COL9A3Q14050 684 aaPredicted RBP2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 SLC4A8Q2Y0W8 1093 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 LRSAM1Q6UWE0 723 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 CNTROBQ8N137 903 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 ZKSCAN4Q969J2 545 aaPredicted RBP2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 NECAB3Q96P71 396 aaPredicted RBP2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 BTG4Q9NY30 223 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 TRPC6Q9Y210 931 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 LAMA3Q16787 3333 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 USP34Q70CQ2 3546 aa2.18□□□□□ -2.06
RNU6-42P-201ENST00000384165 SPATA31A5Q5VU36 1347 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 SPATA31A7Q8IWB4 1347 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 ZC3H4Q9UPT8 1303 aaKnown RBP2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 CNOT1A5YKK6 2376 aaKnown RBP2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 C2CD3Q4AC94 2353 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 SSH2Q76I76 1423 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 MYO9AB2RTY4 2548 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 WTIPA6NIX2 430 aaPredicted RBP2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 PI4K2BG5E9Z4 385 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 ARHGAP6O43182 974 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 POTEIP0CG38 1075 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 POTEJP0CG39 1038 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 NOGQ13253 232 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 PUM1Q14671 1186 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 EAPPQ56P03 285 aaPredicted RBP2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 LMOD2Q6P5Q4 547 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 PPM1EQ8WY54 764 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 MYLIPQ8WY64 445 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 PRRX2Q99811 253 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 KRTAP17-1Q9BYP8 105 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 IRF2BPLQ9H1B7 796 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 SEMA6BQ9H3T3 888 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 C11orf16Q9NQ32 467 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 RNF186Q9NXI6 227 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 THEGQ9P2T0 379 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 NLRP1Q9C000 1473 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 CROCC2H7BZ55 1655 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 NCOR2Q9Y618 2525 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 ABCA9Q8IUA7 1624 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 ACEP12821 1306 aa2.17□□□□□ -2.06
RNU6-42P-201ENST00000384165 MROH2AA6NES4 1674 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 NKTRP30414 1462 aaKnown RBP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 COL15A1P39059 1388 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 IQCA1LA6NCM1 817 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 EVI5O60447 810 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 MAPK8IP2Q13387 824 aaPredicted RBP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 AAK1Q2M2I8 961 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 LARP1BQ659C4 914 aaKnown RBP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 MSL1Q68DK7 614 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 TDHQ8IZJ6 230 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 SYNE4Q8N205 404 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 MFSD14AQ96MC6 490 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 TSPYL2Q9H2G4 693 aaPredicted RBP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 DDX21Q9NR30 783 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 USP35Q9P2H5 1018 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 MAP1BP46821 2468 aaKnown RBP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 HTTP42858 3142 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 ABCA10Q8WWZ4 1543 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 GPATCH8Q9UKJ3 1502 aaKnown RBP2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 ERBINQ96RT1 1412 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 CNTNAP5Q8WYK1 1306 aa2.16□□□□□ -2.06
RNU6-42P-201ENST00000384165 KDM5AP29375 1690 aaKnown RBP2.15□□□□□ -2.06
RNU6-42P-201ENST00000384165 SAMD9LQ8IVG5 1584 aa2.15□□□□□ -2.06
RNU6-42P-201ENST00000384165 NAV3Q8IVL0 2385 aa2.15□□□□□ -2.06
RNU6-42P-201ENST00000384165 HELZ2Q9BYK8 2649 aaKnown RBP2.15□□□□□ -2.06
RNU6-42P-201ENST00000384165 A0A0G2JLW4 131 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 NBPF11Q86T75 865 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 LSM14BQ9BX40 385 aaKnown RBP2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 JAG2Q9Y219 1238 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 TLL2Q9Y6L7 1015 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 PREX2Q70Z35 1606 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 USP32Q8NFA0 1604 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 SETD2Q9BYW2 2564 aaPredicted RBP2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 NEXMIFQ5QGS0 1516 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 ITSN2Q9NZM3 1697 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 MINK1Q8N4C8 1332 aaPredicted RBP2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 WASHC2CQ9Y4E1 1318 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 DCHS1Q96JQ0 3298 aa2.15□□□□□ -2.07
RNU6-42P-201ENST00000384165 MYOM2P54296 1465 aa2.14□□□□□ -2.07
RNU6-42P-201ENST00000384165 SPTAN1Q13813 2472 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms