RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
CSPG5-202ENST00000383738 ZNF592Q92610 1267 aa22.85■■□□□ 1.25
CSPG5-202ENST00000383738 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
CSPG5-202ENST00000383738 NEO1Q92859 1461 aa22.84■■□□□ 1.25
CSPG5-202ENST00000383738 ZRSR1Q15695 479 aaKnown RBP22.83■■□□□ 1.25
CSPG5-202ENST00000383738 ZNF771Q7L3S4 317 aaPredicted RBP22.83■■□□□ 1.24
CSPG5-202ENST00000383738 CLASRPQ8N2M8 674 aaKnown RBP22.82■■□□□ 1.24
CSPG5-202ENST00000383738 SYAP1Q96A49 352 aaPredicted RBP22.82■■□□□ 1.24
CSPG5-202ENST00000383738 CFAP44Q96MT7 982 aa22.82■■□□□ 1.24
CSPG5-202ENST00000383738 TNPO1Q92973 898 aaKnown RBP22.82■■□□□ 1.24
CSPG5-202ENST00000383738 DNAJC2Q99543 621 aaKnown RBP22.82■■□□□ 1.24
CSPG5-202ENST00000383738 UBAP1LF5GYI3 381 aa22.82■■□□□ 1.24
CSPG5-202ENST00000383738 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
CSPG5-202ENST00000383738 TMEM2Q9UHN6 1383 aa22.81■■□□□ 1.24
CSPG5-202ENST00000383738 PCDHB15Q9Y5E8 787 aa22.81■■□□□ 1.24
CSPG5-202ENST00000383738 ATP5J2-PTCD1G3V325 749 aa22.8■■□□□ 1.24
CSPG5-202ENST00000383738 SSFA2P28290 1259 aa22.8■■□□□ 1.24
CSPG5-202ENST00000383738 FBXW7Q969H0 707 aa22.8■■□□□ 1.24
CSPG5-202ENST00000383738 ABCC1P33527 1531 aa22.8■■□□□ 1.24
CSPG5-202ENST00000383738 RLBP1P12271 317 aa22.79■■□□□ 1.24
CSPG5-202ENST00000383738 CLCN1P35523 988 aa22.79■■□□□ 1.24
CSPG5-202ENST00000383738 VPS37DQ86XT2 251 aa22.79■■□□□ 1.24
CSPG5-202ENST00000383738 ZBTB3Q9H5J0 574 aa22.79■■□□□ 1.24
CSPG5-202ENST00000383738 CCDC173Q0VFZ6 552 aa22.79■■□□□ 1.24
CSPG5-202ENST00000383738 TSHZ3Q63HK5 1081 aa22.79■■□□□ 1.24
CSPG5-202ENST00000383738 TMX4Q9H1E5 349 aaPredicted RBP22.78■■□□□ 1.24
CSPG5-202ENST00000383738 COL17A1Q9UMD9 1497 aaPredicted RBP22.78■■□□□ 1.24
CSPG5-202ENST00000383738 GNL2Q13823 731 aaKnown RBP22.78■■□□□ 1.24
CSPG5-202ENST00000383738 NUTM1Q86Y26 1132 aa22.78■■□□□ 1.24
CSPG5-202ENST00000383738 SPATA31E1Q6ZUB1 1445 aa22.78■■□□□ 1.24
CSPG5-202ENST00000383738 LRPPRCP42704 1394 aaKnown RBP22.78■■□□□ 1.24
CSPG5-202ENST00000383738 MSH6P52701 1360 aa22.78■■□□□ 1.24
CSPG5-202ENST00000383738 KDM4AO75164 1064 aa22.77■■□□□ 1.24
CSPG5-202ENST00000383738 FOSBP53539 338 aa22.77■■□□□ 1.24
CSPG5-202ENST00000383738 ZSCAN30Q86W11 494 aa22.77■■□□□ 1.24
CSPG5-202ENST00000383738 ARHGEF5Q12774 1597 aa22.77■■□□□ 1.24
CSPG5-202ENST00000383738 ACSBG1Q96GR2 724 aa22.77■■□□□ 1.24
CSPG5-202ENST00000383738 NKTRP30414 1462 aaKnown RBP22.77■■□□□ 1.23
CSPG5-202ENST00000383738 PI4KAP2A4QPH2 592 aa22.76■■□□□ 1.23
CSPG5-202ENST00000383738 GPTP24298 496 aa22.76■■□□□ 1.23
CSPG5-202ENST00000383738 WASHC4Q2M389 1173 aa22.76■■□□□ 1.23
CSPG5-202ENST00000383738 PI4KAP1Q8N8J0 262 aa22.76■■□□□ 1.23
CSPG5-202ENST00000383738 ZFYVE16Q7Z3T8 1539 aa22.76■■□□□ 1.23
CSPG5-202ENST00000383738 RNF123Q5XPI4 1314 aa22.76■■□□□ 1.23
CSPG5-202ENST00000383738 CCT4P50991 539 aaKnown RBP22.75■■□□□ 1.23
CSPG5-202ENST00000383738 FLIIQ13045 1269 aa22.75■■□□□ 1.23
CSPG5-202ENST00000383738 STK11IPQ8N1F8 1099 aa22.75■■□□□ 1.23
CSPG5-202ENST00000383738 TBC1D32Q96NH3 1257 aa22.75■■□□□ 1.23
CSPG5-202ENST00000383738 TMOD3Q9NYL9 352 aa22.75■■□□□ 1.23
CSPG5-202ENST00000383738 MYD88Q99836 296 aa22.75■■□□□ 1.23
CSPG5-202ENST00000383738 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
CSPG5-202ENST00000383738 CHD1LQ86WJ1 897 aa22.74■■□□□ 1.23
CSPG5-202ENST00000383738 NPHP3Q7Z494 1330 aa22.74■■□□□ 1.23
CSPG5-202ENST00000383738 KIF6Q6ZMV9 814 aa22.74■■□□□ 1.23
CSPG5-202ENST00000383738 NFATC2IPQ8NCF5 419 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 FSD1Q9BTV5 496 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 LRRFIP2Q9Y608 721 aaKnown RBP22.73■■□□□ 1.23
CSPG5-202ENST00000383738 SYCE3A1L190 88 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 GCC2Q8IWJ2 1684 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 REC8O95072 547 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 CBX1P83916 185 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 PPP1R1BQ9UD71 204 aaPredicted RBP22.73■■□□□ 1.23
CSPG5-202ENST00000383738 NSD2O96028 1365 aa22.73■■□□□ 1.23
CSPG5-202ENST00000383738 PRDM15P57071 1507 aaPredicted RBP22.72■■□□□ 1.23
CSPG5-202ENST00000383738 NEK4P51957 841 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 NUCB2P80303 420 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 SPC24Q8NBT2 197 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 PTPRTO14522 1441 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 HOXC9P31274 260 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 AMOTQ4VCS5 1084 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 RAD21O60216 631 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 CT47B1P0C2W7 299 aaPredicted RBP22.71■■□□□ 1.23
CSPG5-202ENST00000383738 CCDC27Q2M243 656 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 C8orf37Q96NL8 207 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 K7ELQ4 463 aaPredicted RBP22.71■■□□□ 1.23
CSPG5-202ENST00000383738 MEIS3Q99687 375 aa22.71■■□□□ 1.23
CSPG5-202ENST00000383738 EXOC5O00471 708 aa22.7■■□□□ 1.22
CSPG5-202ENST00000383738 INTS3Q68E01 1043 aaKnown RBP22.7■■□□□ 1.22
CSPG5-202ENST00000383738 CSPP1Q1MSJ5 1256 aa22.7■■□□□ 1.22
CSPG5-202ENST00000383738 LRRCC1Q9C099 1032 aa22.7■■□□□ 1.22
CSPG5-202ENST00000383738 CNNM1Q9NRU3 951 aa22.7■■□□□ 1.22
CSPG5-202ENST00000383738 CHPF2Q9P2E5 772 aa22.7■■□□□ 1.22
CSPG5-202ENST00000383738 TTC21AQ8NDW8 1320 aa22.7■■□□□ 1.22
CSPG5-202ENST00000383738 PDCL3Q9H2J4 239 aa22.69■■□□□ 1.22
CSPG5-202ENST00000383738 RBM27Q9P2N5 1060 aaKnown RBP22.69■■□□□ 1.22
CSPG5-202ENST00000383738 CHMP4CQ96CF2 233 aa22.69■■□□□ 1.22
CSPG5-202ENST00000383738 IFNL2Q8IZJ0 200 aa22.69■■□□□ 1.22
CSPG5-202ENST00000383738 MTMR7Q9Y216 660 aa22.69■■□□□ 1.22
CSPG5-202ENST00000383738 HSP90AB4PQ58FF6 505 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 MLH3Q9UHC1 1453 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 CDC45O75419 566 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 AACSQ86V21 672 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 POLR3AO14802 1390 aaPredicted RBP22.68■■□□□ 1.22
CSPG5-202ENST00000383738 MAGI2Q86UL8 1455 aa22.68■■□□□ 1.22
CSPG5-202ENST00000383738 IGSF3O75054 1194 aa22.67■■□□□ 1.22
CSPG5-202ENST00000383738 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
CSPG5-202ENST00000383738 IL13P35225 146 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms