RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 TTC21BQ7Z4L5 1316 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 MYO6Q9UM54 1294 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 CT47A1Q5JQC4 288 aaPredicted RBP16.64■□□□□ 0.25
SNPH-201ENST00000381867 UQCRHLA0A096LP55 91 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 OFD1O75665 1012 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 UQCRHP07919 91 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 CCDC112Q8NEF3 446 aa16.64■□□□□ 0.25
SNPH-201ENST00000381867 AMOTQ4VCS5 1084 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 FIBPO43427 364 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 TSPYL1Q9H0U9 437 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 SPC24Q8NBT2 197 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 PRAG1Q86YV5 1406 aa16.63■□□□□ 0.25
SNPH-201ENST00000381867 CCDC192P0DO97 292 aa16.62■□□□□ 0.25
SNPH-201ENST00000381867 FILIP1LQ4L180 1135 aa16.62■□□□□ 0.25
SNPH-201ENST00000381867 NEUROD6Q96NK8 337 aa16.62■□□□□ 0.25
SNPH-201ENST00000381867 XBP1P17861 261 aa16.62■□□□□ 0.25
SNPH-201ENST00000381867 MSH6P52701 1360 aa16.62■□□□□ 0.25
SNPH-201ENST00000381867 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
SNPH-201ENST00000381867 AXDND1Q5T1B0 1012 aaPredicted RBP16.62■□□□□ 0.25
SNPH-201ENST00000381867 ESPNB1AK53 854 aa16.61■□□□□ 0.25
SNPH-201ENST00000381867 ZNF396Q96N95 335 aaPredicted RBP16.61■□□□□ 0.25
SNPH-201ENST00000381867 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
SNPH-201ENST00000381867 EPS15P42566 896 aa16.61■□□□□ 0.25
SNPH-201ENST00000381867 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
SNPH-201ENST00000381867 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
SNPH-201ENST00000381867 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
SNPH-201ENST00000381867 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
SNPH-201ENST00000381867 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
SNPH-201ENST00000381867 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
SNPH-201ENST00000381867 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
SNPH-201ENST00000381867 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
SNPH-201ENST00000381867 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 CCDC43Q96MW1 224 aaKnown RBP16.59■□□□□ 0.25
SNPH-201ENST00000381867 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 FYB1O15117 783 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 ODF2Q5BJF6 829 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
SNPH-201ENST00000381867 HIP1O00291 1037 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
SNPH-201ENST00000381867 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 HSP90AB2PQ58FF8 381 aa16.59■□□□□ 0.25
SNPH-201ENST00000381867 CLASRPQ8N2M8 674 aaKnown RBP16.59■□□□□ 0.25
SNPH-201ENST00000381867 CIZ1Q9ULV3 898 aaPredicted RBP16.59■□□□□ 0.25
SNPH-201ENST00000381867 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.25
SNPH-201ENST00000381867 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.25
SNPH-201ENST00000381867 ZFYVE16Q7Z3T8 1539 aa16.58■□□□□ 0.25
SNPH-201ENST00000381867 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
SNPH-201ENST00000381867 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
SNPH-201ENST00000381867 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
SNPH-201ENST00000381867 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
SNPH-201ENST00000381867 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
SNPH-201ENST00000381867 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
SNPH-201ENST00000381867 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
SNPH-201ENST00000381867 MCM4P33991 863 aa16.57■□□□□ 0.24
SNPH-201ENST00000381867 ERLIN1O75477 346 aa16.56■□□□□ 0.24
SNPH-201ENST00000381867 STK38Q15208 465 aa16.56■□□□□ 0.24
SNPH-201ENST00000381867 EIF3JO75822 258 aaKnown RBP16.56■□□□□ 0.24
SNPH-201ENST00000381867 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
SNPH-201ENST00000381867 KIAA0754O94854 1291 aa16.56■□□□□ 0.24
SNPH-201ENST00000381867 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
SNPH-201ENST00000381867 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
SNPH-201ENST00000381867 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
SNPH-201ENST00000381867 SERPINC1P01008 464 aa16.55■□□□□ 0.24
SNPH-201ENST00000381867 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
SNPH-201ENST00000381867 GNAI2P04899 355 aa16.55■□□□□ 0.24
SNPH-201ENST00000381867 CHD1O14646 1710 aa16.54■□□□□ 0.24
SNPH-201ENST00000381867 KRI1Q8N9T8 703 aaKnown RBP16.54■□□□□ 0.24
SNPH-201ENST00000381867 JMYQ8N9B5 988 aa16.54■□□□□ 0.24
SNPH-201ENST00000381867 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
SNPH-201ENST00000381867 NME9Q86XW9 330 aa16.54■□□□□ 0.24
SNPH-201ENST00000381867 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
SNPH-201ENST00000381867 MAGI2Q86UL8 1455 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 TAF3Q5VWG9 929 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 ZSCAN30Q86W11 494 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 TBX22Q9Y458 520 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNPH-201ENST00000381867 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 KRT85P78386 507 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 GOLGA6L10A6NI86 522 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 HSP90AB3PQ58FF7 597 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 ZNHIT6Q9NWK9 470 aaKnown RBP16.53■□□□□ 0.24
SNPH-201ENST00000381867 TRPM2O94759 1503 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
SNPH-201ENST00000381867 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
SNPH-201ENST00000381867 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
SNPH-201ENST00000381867 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
SNPH-201ENST00000381867 CYP46A1Q9Y6A2 500 aa16.52■□□□□ 0.24
SNPH-201ENST00000381867 UHRF1BP1Q6BDS2 1440 aa16.52■□□□□ 0.24
SNPH-201ENST00000381867 PZPP20742 1482 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms