RNA–Protein interactions for RNA: ENST00000381582.3

GABRB1-202, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 2

Gene GABRB1, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-202ENST00000381582 USHBP1Q8N6Y0 703 aa20.81■□□□□ 0.92
GABRB1-202ENST00000381582 DDX54Q8TDD1 881 aaKnown RBP20.81■□□□□ 0.92
GABRB1-202ENST00000381582 APBA3O96018 575 aa20.8■□□□□ 0.92
GABRB1-202ENST00000381582 RALBP1Q15311 655 aa20.8■□□□□ 0.92
GABRB1-202ENST00000381582 AMOTQ4VCS5 1084 aa20.8■□□□□ 0.92
GABRB1-202ENST00000381582 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
GABRB1-202ENST00000381582 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
GABRB1-202ENST00000381582 MEGF6O75095 1541 aa20.78■□□□□ 0.92
GABRB1-202ENST00000381582 IL13P35225 146 aa20.78■□□□□ 0.92
GABRB1-202ENST00000381582 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
GABRB1-202ENST00000381582 PLSCR1O15162 318 aa20.77■□□□□ 0.92
GABRB1-202ENST00000381582 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.92
GABRB1-202ENST00000381582 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
GABRB1-202ENST00000381582 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
GABRB1-202ENST00000381582 RGPD2P0DJD1 1756 aa20.76■□□□□ 0.91
GABRB1-202ENST00000381582 PPP2R1AP30153 589 aa20.75■□□□□ 0.91
GABRB1-202ENST00000381582 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
GABRB1-202ENST00000381582 KDRP35968 1356 aa20.73■□□□□ 0.91
GABRB1-202ENST00000381582 SULT6B1Q6IMI4 303 aa20.73■□□□□ 0.91
GABRB1-202ENST00000381582 DEFB132Q7Z7B7 95 aa20.73■□□□□ 0.91
GABRB1-202ENST00000381582 EN1Q05925 392 aaPredicted RBP20.72■□□□□ 0.91
GABRB1-202ENST00000381582 TNS1Q9HBL0 1735 aaKnown RBP20.71■□□□□ 0.91
GABRB1-202ENST00000381582 C1orf141Q5JVX7 400 aa20.7■□□□□ 0.9
GABRB1-202ENST00000381582 NBPF14Q5TI25 921 aa20.7■□□□□ 0.9
GABRB1-202ENST00000381582 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
GABRB1-202ENST00000381582 PKD1L3Q7Z443 1732 aa20.7■□□□□ 0.9
GABRB1-202ENST00000381582 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
GABRB1-202ENST00000381582 NEFMP07197 916 aa20.69■□□□□ 0.9
GABRB1-202ENST00000381582 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
GABRB1-202ENST00000381582 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
GABRB1-202ENST00000381582 NHSQ6T4R5 1651 aa20.69■□□□□ 0.9
GABRB1-202ENST00000381582 RGPD3A6NKT7 1758 aaPredicted RBP20.68■□□□□ 0.9
GABRB1-202ENST00000381582 RGPD4Q7Z3J3 1758 aa20.68■□□□□ 0.9
GABRB1-202ENST00000381582 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
GABRB1-202ENST00000381582 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
GABRB1-202ENST00000381582 SBF2Q86WG5 1849 aa20.68■□□□□ 0.9
GABRB1-202ENST00000381582 CYP27B1O15528 508 aa20.66■□□□□ 0.9
GABRB1-202ENST00000381582 PHKG2P15735 406 aa20.66■□□□□ 0.9
GABRB1-202ENST00000381582 EZH2Q15910 746 aaKnown RBP20.66■□□□□ 0.9
GABRB1-202ENST00000381582 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
GABRB1-202ENST00000381582 MYBBP1AQ9BQG0 1328 aaKnown RBP20.66■□□□□ 0.9
GABRB1-202ENST00000381582 PRIM1P49642 420 aaKnown RBP20.65■□□□□ 0.9
GABRB1-202ENST00000381582 ZNF530Q6P9A1 599 aaPredicted RBP20.65■□□□□ 0.9
GABRB1-202ENST00000381582 COL3A1P02461 1466 aaPredicted RBP20.64■□□□□ 0.89
GABRB1-202ENST00000381582 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.89
GABRB1-202ENST00000381582 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
GABRB1-202ENST00000381582 KCNQ2O43526 872 aa20.63■□□□□ 0.89
GABRB1-202ENST00000381582 FCHSD2O94868 740 aa20.63■□□□□ 0.89
GABRB1-202ENST00000381582 HMOX1P09601 288 aa20.63■□□□□ 0.89
GABRB1-202ENST00000381582 AEBP1Q8IUX7 1158 aa20.63■□□□□ 0.89
GABRB1-202ENST00000381582 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
GABRB1-202ENST00000381582 SHANK3Q9BYB0 1731 aa20.62■□□□□ 0.89
GABRB1-202ENST00000381582 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
GABRB1-202ENST00000381582 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
GABRB1-202ENST00000381582 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
GABRB1-202ENST00000381582 AKAP4Q5JQC9 854 aa20.62■□□□□ 0.89
GABRB1-202ENST00000381582 TMOD3Q9NYL9 352 aa20.61■□□□□ 0.89
GABRB1-202ENST00000381582 EP400Q96L91 3159 aa20.61■□□□□ 0.89
GABRB1-202ENST00000381582 TXNRD1Q16881 649 aa20.6■□□□□ 0.89
GABRB1-202ENST00000381582 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.89
GABRB1-202ENST00000381582 MPRIPQ6WCQ1 1025 aa20.58■□□□□ 0.89
GABRB1-202ENST00000381582 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
GABRB1-202ENST00000381582 RREB1Q92766 1687 aa20.57■□□□□ 0.88
GABRB1-202ENST00000381582 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
GABRB1-202ENST00000381582 BTAF1O14981 1849 aa20.56■□□□□ 0.88
GABRB1-202ENST00000381582 CABP4P57796 275 aa20.56■□□□□ 0.88
GABRB1-202ENST00000381582 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
GABRB1-202ENST00000381582 ANP32CO43423 234 aa20.55■□□□□ 0.88
GABRB1-202ENST00000381582 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
GABRB1-202ENST00000381582 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
GABRB1-202ENST00000381582 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
GABRB1-202ENST00000381582 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
GABRB1-202ENST00000381582 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
GABRB1-202ENST00000381582 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
GABRB1-202ENST00000381582 PALLDQ8WX93 1383 aa20.52■□□□□ 0.88
GABRB1-202ENST00000381582 PIGBQ92521 554 aa20.52■□□□□ 0.88
GABRB1-202ENST00000381582 CCNL1Q9UK58 526 aaPredicted RBP20.52■□□□□ 0.88
GABRB1-202ENST00000381582 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.87
GABRB1-202ENST00000381582 RTF1Q92541 710 aaKnown RBP20.51■□□□□ 0.87
GABRB1-202ENST00000381582 NUP188Q5SRE5 1749 aa20.5■□□□□ 0.87
GABRB1-202ENST00000381582 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
GABRB1-202ENST00000381582 HTATSF1O43719 755 aaKnown RBP20.5■□□□□ 0.87
GABRB1-202ENST00000381582 PROM2Q8N271 834 aa20.5■□□□□ 0.87
GABRB1-202ENST00000381582 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
GABRB1-202ENST00000381582 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
GABRB1-202ENST00000381582 TEFQ10587 303 aa20.48■□□□□ 0.87
GABRB1-202ENST00000381582 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
GABRB1-202ENST00000381582 KDM6AO15550 1401 aaPredicted RBP20.47■□□□□ 0.87
GABRB1-202ENST00000381582 SLC52A2Q9HAB3 445 aa20.47■□□□□ 0.87
GABRB1-202ENST00000381582 ITGB4P16144 1822 aa20.46■□□□□ 0.87
GABRB1-202ENST00000381582 FLAD1Q8NFF5 587 aa20.46■□□□□ 0.87
GABRB1-202ENST00000381582 LY75O60449 1722 aa20.45■□□□□ 0.86
GABRB1-202ENST00000381582 TOGARAM1Q9Y4F4 1720 aa20.45■□□□□ 0.86
GABRB1-202ENST00000381582 LOC102724428A0A0B4J2F2 783 aa20.45■□□□□ 0.86
GABRB1-202ENST00000381582 SIK1P57059 783 aa20.45■□□□□ 0.86
GABRB1-202ENST00000381582 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
GABRB1-202ENST00000381582 PSDA5PKW4 1024 aaPredicted RBP20.44■□□□□ 0.86
GABRB1-202ENST00000381582 LMOD3Q0VAK6 560 aa20.44■□□□□ 0.86
GABRB1-202ENST00000381582 PHACTR3Q96KR7 559 aa20.43■□□□□ 0.86
GABRB1-202ENST00000381582 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms