RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 IL27Q8NEV9 243 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
PDX1-201ENST00000381033 SETD1BQ9UPS6 1966 aaKnown RBP21.79■■□□□ 1.08
PDX1-201ENST00000381033 HOXC9P31274 260 aa21.79■■□□□ 1.08
PDX1-201ENST00000381033 USHBP1Q8N6Y0 703 aa21.79■■□□□ 1.08
PDX1-201ENST00000381033 ANKARQ7Z5J8 1434 aa21.79■■□□□ 1.08
PDX1-201ENST00000381033 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
PDX1-201ENST00000381033 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
PDX1-201ENST00000381033 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.07
PDX1-201ENST00000381033 CHL1O00533 1208 aa21.76■■□□□ 1.07
PDX1-201ENST00000381033 BRPF1P55201 1214 aaPredicted RBP21.76■■□□□ 1.07
PDX1-201ENST00000381033 ZBTB7BO15156 539 aaPredicted RBP21.75■■□□□ 1.07
PDX1-201ENST00000381033 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
PDX1-201ENST00000381033 ZNF428Q96B54 188 aa21.75■■□□□ 1.07
PDX1-201ENST00000381033 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
PDX1-201ENST00000381033 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
PDX1-201ENST00000381033 PSME1Q06323 249 aa21.74■■□□□ 1.07
PDX1-201ENST00000381033 ZNF142P52746 1687 aaPredicted RBP21.73■■□□□ 1.07
PDX1-201ENST00000381033 HDAC1Q13547 482 aaPredicted RBP21.73■■□□□ 1.07
PDX1-201ENST00000381033 USP19O94966 1318 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 CRB1P82279 1406 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 KDRP35968 1356 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
PDX1-201ENST00000381033 HOMEZQ8IX15 550 aa21.72■■□□□ 1.07
PDX1-201ENST00000381033 TULP1O00294 542 aaPredicted RBP21.71■■□□□ 1.07
PDX1-201ENST00000381033 LMOD2Q6P5Q4 547 aa21.7■■□□□ 1.06
PDX1-201ENST00000381033 RTF1Q92541 710 aaKnown RBP21.7■■□□□ 1.06
PDX1-201ENST00000381033 ARHGAP45Q92619 1136 aa21.7■■□□□ 1.06
PDX1-201ENST00000381033 ABCC4O15439 1325 aa21.7■■□□□ 1.06
PDX1-201ENST00000381033 SIRT2Q8IXJ6 389 aa21.69■■□□□ 1.06
PDX1-201ENST00000381033 ADGRL3Q9HAR2 1447 aa21.69■■□□□ 1.06
PDX1-201ENST00000381033 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
PDX1-201ENST00000381033 LNPKQ9C0E8 428 aa21.68■■□□□ 1.06
PDX1-201ENST00000381033 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
PDX1-201ENST00000381033 NWD1Q149M9 1564 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
PDX1-201ENST00000381033 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 G2E3Q7L622 706 aa21.66■■□□□ 1.06
PDX1-201ENST00000381033 SLC4A2P04920 1241 aa21.65■■□□□ 1.06
PDX1-201ENST00000381033 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
PDX1-201ENST00000381033 IL17REQ8NFR9 667 aa21.65■■□□□ 1.06
PDX1-201ENST00000381033 DDX17Q92841 729 aaKnown RBP21.64■■□□□ 1.06
PDX1-201ENST00000381033 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
PDX1-201ENST00000381033 LTN1O94822 1766 aa21.63■■□□□ 1.05
PDX1-201ENST00000381033 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
PDX1-201ENST00000381033 VIRMAQ69YN4 1812 aaKnown RBP21.63■■□□□ 1.05
PDX1-201ENST00000381033 RGS12O14924 1447 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 F6X3S4 739 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 IP6K1Q92551 441 aa21.62■■□□□ 1.05
PDX1-201ENST00000381033 NUCB1Q02818 461 aa21.61■■□□□ 1.05
PDX1-201ENST00000381033 ANKRD45Q5TZF3 282 aa21.61■■□□□ 1.05
PDX1-201ENST00000381033 DDRGK1Q96HY6 314 aa21.61■■□□□ 1.05
PDX1-201ENST00000381033 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
PDX1-201ENST00000381033 GCP02774 474 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 CHD1LQ86WJ1 897 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 MSH6P52701 1360 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 NFAT5O94916 1531 aa21.59■■□□□ 1.05
PDX1-201ENST00000381033 HSPA2P54652 639 aa21.58■■□□□ 1.05
PDX1-201ENST00000381033 SLC4A10Q6U841 1118 aa21.58■■□□□ 1.04
PDX1-201ENST00000381033 LGR6Q9HBX8 967 aa21.58■■□□□ 1.04
PDX1-201ENST00000381033 RGPD2P0DJD1 1756 aa21.57■■□□□ 1.04
PDX1-201ENST00000381033 MEIS3Q99687 375 aa21.57■■□□□ 1.04
PDX1-201ENST00000381033 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
PDX1-201ENST00000381033 INTS3Q68E01 1043 aaKnown RBP21.56■■□□□ 1.04
PDX1-201ENST00000381033 KIF24Q5T7B8 1368 aa21.56■■□□□ 1.04
PDX1-201ENST00000381033 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
PDX1-201ENST00000381033 KRT28Q7Z3Y7 464 aa21.55■■□□□ 1.04
PDX1-201ENST00000381033 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
PDX1-201ENST00000381033 MFAP1P55081 439 aaKnown RBP21.54■■□□□ 1.04
PDX1-201ENST00000381033 ZC3H6P61129 1189 aaKnown RBP21.53■■□□□ 1.04
PDX1-201ENST00000381033 CHMP4AQ9BY43 222 aa21.53■■□□□ 1.04
PDX1-201ENST00000381033 ARHGEF25Q86VW2 580 aa21.53■■□□□ 1.04
PDX1-201ENST00000381033 KCNH5Q8NCM2 988 aa21.53■■□□□ 1.04
PDX1-201ENST00000381033 APBB1O00213 710 aa21.52■■□□□ 1.04
PDX1-201ENST00000381033 DHX37Q8IY37 1157 aaKnown RBP21.52■■□□□ 1.04
PDX1-201ENST00000381033 C19orf44Q9H6X5 657 aa21.52■■□□□ 1.04
PDX1-201ENST00000381033 KCNQ3O43525 872 aa21.52■■□□□ 1.03
PDX1-201ENST00000381033 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
PDX1-201ENST00000381033 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
PDX1-201ENST00000381033 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
PDX1-201ENST00000381033 C16orf71Q8IYS4 520 aaPredicted RBP21.51■■□□□ 1.03
PDX1-201ENST00000381033 TBC1D32Q96NH3 1257 aa21.51■■□□□ 1.03
PDX1-201ENST00000381033 C1orf167Q5SNV9 1468 aa21.5■■□□□ 1.03
PDX1-201ENST00000381033 HTATSF1O43719 755 aaKnown RBP21.5■■□□□ 1.03
PDX1-201ENST00000381033 GCC1Q96CN9 775 aa21.5■■□□□ 1.03
PDX1-201ENST00000381033 PTPRCP08575 1304 aa21.5■■□□□ 1.03
PDX1-201ENST00000381033 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
PDX1-201ENST00000381033 TMEM94Q12767 1356 aa21.49■■□□□ 1.03
PDX1-201ENST00000381033 CABLES1Q8TDN4 633 aa21.49■■□□□ 1.03
PDX1-201ENST00000381033 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
PDX1-201ENST00000381033 ANKRD24Q8TF21 1146 aa21.49■■□□□ 1.03
PDX1-201ENST00000381033 ATP10DQ9P241 1426 aa21.48■■□□□ 1.03
PDX1-201ENST00000381033 CEP85Q6P2H3 762 aa21.48■■□□□ 1.03
PDX1-201ENST00000381033 FLIIQ13045 1269 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms