RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 ANKRD44Q8N8A2 993 aa24.01■■□□□ 1.43
FOXC1-201ENST00000380874 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
FOXC1-201ENST00000380874 PREX1Q8TCU6 1659 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 TMEM131LA2VDJ0 1609 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 REC8O95072 547 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 FOXD4L6Q3SYB3 417 aaPredicted RBP24■■□□□ 1.43
FOXC1-201ENST00000380874 CCDC30Q5VVM6 783 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 FOXD4L3Q6VB84 417 aaPredicted RBP24■■□□□ 1.43
FOXC1-201ENST00000380874 CHL1O00533 1208 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 DCTPP1Q9H773 170 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 TMEM2Q9UHN6 1383 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 MYO5BQ9ULV0 1848 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 PSME1Q06323 249 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 EYA1Q99502 592 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 ANO2Q9NQ90 1003 aa24■■□□□ 1.43
FOXC1-201ENST00000380874 ANO8Q9HCE9 1232 aaPredicted RBP23.99■■□□□ 1.43
FOXC1-201ENST00000380874 TTC22Q5TAA0 569 aa23.99■■□□□ 1.43
FOXC1-201ENST00000380874 CEP85Q6P2H3 762 aa23.99■■□□□ 1.43
FOXC1-201ENST00000380874 MCCP23508 829 aa23.98■■□□□ 1.43
FOXC1-201ENST00000380874 CCT4P50991 539 aaKnown RBP23.98■■□□□ 1.43
FOXC1-201ENST00000380874 MED14O60244 1454 aa23.98■■□□□ 1.43
FOXC1-201ENST00000380874 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
FOXC1-201ENST00000380874 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
FOXC1-201ENST00000380874 TEFQ10587 303 aa23.97■■□□□ 1.43
FOXC1-201ENST00000380874 SDSP20132 328 aa23.97■■□□□ 1.43
FOXC1-201ENST00000380874 RBM25P49756 843 aaKnown RBP23.97■■□□□ 1.43
FOXC1-201ENST00000380874 GNAT3A8MTJ3 354 aa23.97■■□□□ 1.43
FOXC1-201ENST00000380874 SSFA2P28290 1259 aa23.97■■□□□ 1.43
FOXC1-201ENST00000380874 MCTP1Q6DN14 999 aa23.97■■□□□ 1.43
FOXC1-201ENST00000380874 IL1RAPL2Q9NP60 686 aa23.97■■□□□ 1.43
FOXC1-201ENST00000380874 MSH6P52701 1360 aa23.96■■□□□ 1.43
FOXC1-201ENST00000380874 RABEP1Q15276 862 aa23.96■■□□□ 1.43
FOXC1-201ENST00000380874 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
FOXC1-201ENST00000380874 USP32Q8NFA0 1604 aa23.96■■□□□ 1.43
FOXC1-201ENST00000380874 UBTFL1P0CB47 393 aaPredicted RBP23.96■■□□□ 1.43
FOXC1-201ENST00000380874 ESCO1Q5FWF5 840 aa23.95■■□□□ 1.43
FOXC1-201ENST00000380874 NLRP1Q9C000 1473 aa23.95■■□□□ 1.42
FOXC1-201ENST00000380874 PTPRCP08575 1304 aa23.95■■□□□ 1.42
FOXC1-201ENST00000380874 GSPT1P15170 499 aaKnown RBP23.95■■□□□ 1.42
FOXC1-201ENST00000380874 FLIIQ13045 1269 aa23.94■■□□□ 1.42
FOXC1-201ENST00000380874 GNAI3P08754 354 aa23.94■■□□□ 1.42
FOXC1-201ENST00000380874 BRPF1P55201 1214 aaPredicted RBP23.94■■□□□ 1.42
FOXC1-201ENST00000380874 PANK2Q9BZ23 570 aa23.93■■□□□ 1.42
FOXC1-201ENST00000380874 CD2BP2O95400 341 aaKnown RBP23.93■■□□□ 1.42
FOXC1-201ENST00000380874 MAP4K4O95819 1239 aaPredicted RBP23.93■■□□□ 1.42
FOXC1-201ENST00000380874 NEK4P51957 841 aa23.93■■□□□ 1.42
FOXC1-201ENST00000380874 NAP1L5Q96NT1 182 aaPredicted RBP23.93■■□□□ 1.42
FOXC1-201ENST00000380874 SURF6O75683 361 aaKnown RBP23.93■■□□□ 1.42
FOXC1-201ENST00000380874 PLEKHG3A1L390 1219 aa23.92■■□□□ 1.42
FOXC1-201ENST00000380874 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
FOXC1-201ENST00000380874 LRRCC1Q9C099 1032 aa23.92■■□□□ 1.42
FOXC1-201ENST00000380874 CPSF1Q10570 1443 aaKnown RBP23.92■■□□□ 1.42
FOXC1-201ENST00000380874 SNX21Q969T3 373 aa23.91■■□□□ 1.42
FOXC1-201ENST00000380874 CPS1P31327 1500 aa23.91■■□□□ 1.42
FOXC1-201ENST00000380874 CDK12Q9NYV4 1490 aaPredicted RBP23.91■■□□□ 1.42
FOXC1-201ENST00000380874 ERC2O15083 957 aa23.91■■□□□ 1.42
FOXC1-201ENST00000380874 ADGRB2O60241 1585 aa23.91■■□□□ 1.42
FOXC1-201ENST00000380874 LRRFIP2Q9Y608 721 aaKnown RBP23.91■■□□□ 1.42
FOXC1-201ENST00000380874 KCNA6P17658 529 aa23.91■■□□□ 1.42
FOXC1-201ENST00000380874 RICTORQ6R327 1708 aa23.9■■□□□ 1.42
FOXC1-201ENST00000380874 CIZ1Q9ULV3 898 aaPredicted RBP23.9■■□□□ 1.42
FOXC1-201ENST00000380874 ANXA1P04083 346 aa23.89■■□□□ 1.42
FOXC1-201ENST00000380874 SIRT1Q96EB6 747 aa23.89■■□□□ 1.42
FOXC1-201ENST00000380874 XRCC6P12956 609 aaKnown RBP eCLIP23.89■■□□□ 1.41
FOXC1-201ENST00000380874 SKOR2Q2VWA4 1001 aaPredicted RBP23.89■■□□□ 1.41
FOXC1-201ENST00000380874 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
FOXC1-201ENST00000380874 FLT4P35916 1363 aa23.88■■□□□ 1.41
FOXC1-201ENST00000380874 MRE11P49959 708 aa23.88■■□□□ 1.41
FOXC1-201ENST00000380874 NUTM1Q86Y26 1132 aa23.88■■□□□ 1.41
FOXC1-201ENST00000380874 TAF7Q15545 349 aaPredicted RBP23.87■■□□□ 1.41
FOXC1-201ENST00000380874 TTC21AQ8NDW8 1320 aa23.87■■□□□ 1.41
FOXC1-201ENST00000380874 KIAA1211Q6ZU35 1233 aa23.86■■□□□ 1.41
FOXC1-201ENST00000380874 PTCH1Q13635 1447 aa23.86■■□□□ 1.41
FOXC1-201ENST00000380874 PTMSP20962 102 aa23.86■■□□□ 1.41
FOXC1-201ENST00000380874 KCNJ4P48050 445 aa23.86■■□□□ 1.41
FOXC1-201ENST00000380874 C1orf141Q5JVX7 400 aa23.86■■□□□ 1.41
FOXC1-201ENST00000380874 GRPEL1Q9HAV7 217 aa23.86■■□□□ 1.41
FOXC1-201ENST00000380874 NUCB2P80303 420 aa23.85■■□□□ 1.41
FOXC1-201ENST00000380874 ZNF530Q6P9A1 599 aaPredicted RBP23.85■■□□□ 1.41
FOXC1-201ENST00000380874 PDE1AP54750 535 aa23.84■■□□□ 1.41
FOXC1-201ENST00000380874 AIMP1Q12904 312 aaKnown RBP23.84■■□□□ 1.41
FOXC1-201ENST00000380874 C9orf78Q9NZ63 289 aaPredicted RBP23.84■■□□□ 1.41
FOXC1-201ENST00000380874 PHF8Q9UPP1 1060 aa23.84■■□□□ 1.41
FOXC1-201ENST00000380874 MAP2P11137 1827 aaKnown RBP23.84■■□□□ 1.41
FOXC1-201ENST00000380874 MX1P20591 662 aa23.84■■□□□ 1.41
FOXC1-201ENST00000380874 CAVIN1Q6NZI2 390 aaKnown RBP23.83■■□□□ 1.41
FOXC1-201ENST00000380874 SRCIN1Q9C0H9 1055 aa23.83■■□□□ 1.41
FOXC1-201ENST00000380874 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
FOXC1-201ENST00000380874 SRGAP3O43295 1099 aa23.83■■□□□ 1.4
FOXC1-201ENST00000380874 MPRIPQ6WCQ1 1025 aa23.83■■□□□ 1.4
FOXC1-201ENST00000380874 USP6P35125 1406 aa23.82■■□□□ 1.4
FOXC1-201ENST00000380874 PRPF40AO75400 957 aaKnown RBP23.82■■□□□ 1.4
FOXC1-201ENST00000380874 HOXC9P31274 260 aa23.82■■□□□ 1.4
FOXC1-201ENST00000380874 UPF3BQ9BZI7 483 aaKnown RBP23.82■■□□□ 1.4
FOXC1-201ENST00000380874 USP26Q9BXU7 913 aa23.82■■□□□ 1.4
FOXC1-201ENST00000380874 TBX22Q9Y458 520 aa23.82■■□□□ 1.4
FOXC1-201ENST00000380874 FAM43AQ8N2R8 423 aa23.81■■□□□ 1.4
FOXC1-201ENST00000380874 PHAXQ9H814 394 aaKnown RBP23.81■■□□□ 1.4
FOXC1-201ENST00000380874 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
FOXC1-201ENST00000380874 RAB3GAP1Q15042 981 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms