RNA–Protein interactions for RNA: ENST00000379241.7

VIT-201, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-201ENST00000379241 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
VIT-201ENST00000379241 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
VIT-201ENST00000379241 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
VIT-201ENST00000379241 HOXC9P31274 260 aa13.18□□□□□ -0.3
VIT-201ENST00000379241 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
VIT-201ENST00000379241 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
VIT-201ENST00000379241 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
VIT-201ENST00000379241 ATF3P18847 181 aa13.17□□□□□ -0.3
VIT-201ENST00000379241 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
VIT-201ENST00000379241 CLSTN1O94985 981 aa13.17□□□□□ -0.3
VIT-201ENST00000379241 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
VIT-201ENST00000379241 DCCP43146 1447 aa13.17□□□□□ -0.3
VIT-201ENST00000379241 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
VIT-201ENST00000379241 LAS1LQ9Y4W2 734 aaKnown RBP13.16□□□□□ -0.3
VIT-201ENST00000379241 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 SOCS7O14512 581 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 GNAI1P63096 354 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 EYA1Q99502 592 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 KDRP35968 1356 aa13.16□□□□□ -0.3
VIT-201ENST00000379241 KIF1AQ12756 1690 aa13.15□□□□□ -0.3
VIT-201ENST00000379241 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
VIT-201ENST00000379241 MST1RQ04912 1400 aa13.15□□□□□ -0.3
VIT-201ENST00000379241 NFAT5O94916 1531 aa13.15□□□□□ -0.3
VIT-201ENST00000379241 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
VIT-201ENST00000379241 PRDM4Q9UKN5 801 aa13.14□□□□□ -0.31
VIT-201ENST00000379241 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
VIT-201ENST00000379241 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
VIT-201ENST00000379241 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
VIT-201ENST00000379241 DLG5Q8TDM6 1919 aa13.14□□□□□ -0.31
VIT-201ENST00000379241 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
VIT-201ENST00000379241 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
VIT-201ENST00000379241 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
VIT-201ENST00000379241 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
VIT-201ENST00000379241 IP6K1Q92551 441 aa13.13□□□□□ -0.31
VIT-201ENST00000379241 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
VIT-201ENST00000379241 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
VIT-201ENST00000379241 LTV1Q96GA3 475 aaPredicted RBP13.12□□□□□ -0.31
VIT-201ENST00000379241 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
VIT-201ENST00000379241 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
VIT-201ENST00000379241 MSH6P52701 1360 aa13.12□□□□□ -0.31
VIT-201ENST00000379241 GCP02774 474 aa13.11□□□□□ -0.31
VIT-201ENST00000379241 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
VIT-201ENST00000379241 LTN1O94822 1766 aa13.11□□□□□ -0.31
VIT-201ENST00000379241 TRPM3Q9HCF6 1732 aaPredicted RBP13.11□□□□□ -0.31
VIT-201ENST00000379241 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
VIT-201ENST00000379241 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
VIT-201ENST00000379241 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
VIT-201ENST00000379241 SLIT3O75094 1523 aa13.11□□□□□ -0.31
VIT-201ENST00000379241 STRCQ7RTU9 1775 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 USP19O94966 1318 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 RLBP1P12271 317 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 KDM2BQ8NHM5 1336 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 MS4A1P11836 297 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 MCM10Q7L590 875 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
VIT-201ENST00000379241 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
VIT-201ENST00000379241 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
VIT-201ENST00000379241 VAMP4O75379 141 aa13.09□□□□□ -0.31
VIT-201ENST00000379241 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
VIT-201ENST00000379241 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
VIT-201ENST00000379241 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
VIT-201ENST00000379241 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
VIT-201ENST00000379241 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
VIT-201ENST00000379241 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
VIT-201ENST00000379241 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
VIT-201ENST00000379241 NOB1Q9ULX3 412 aaKnown RBP13.08□□□□□ -0.32
VIT-201ENST00000379241 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
VIT-201ENST00000379241 TRIM27P14373 513 aa13.07□□□□□ -0.32
VIT-201ENST00000379241 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
VIT-201ENST00000379241 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
VIT-201ENST00000379241 ILDR2Q71H61 639 aa13.07□□□□□ -0.32
VIT-201ENST00000379241 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
VIT-201ENST00000379241 PLCD4Q9BRC7 762 aa13.07□□□□□ -0.32
VIT-201ENST00000379241 CHL1O00533 1208 aa13.07□□□□□ -0.32
VIT-201ENST00000379241 IPO8O15397 1037 aaKnown RBP13.07□□□□□ -0.32
VIT-201ENST00000379241 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
VIT-201ENST00000379241 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
VIT-201ENST00000379241 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
VIT-201ENST00000379241 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
VIT-201ENST00000379241 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
VIT-201ENST00000379241 USHBP1Q8N6Y0 703 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 CRB1P82279 1406 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
VIT-201ENST00000379241 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 PSMD1Q99460 953 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
VIT-201ENST00000379241 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
VIT-201ENST00000379241 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
VIT-201ENST00000379241 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
VIT-201ENST00000379241 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
VIT-201ENST00000379241 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
VIT-201ENST00000379241 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms