RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 GOLGA6L22H0YM25 854 aa15.71■□□□□ 0.11
CHGB-201ENST00000378961 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
CHGB-201ENST00000378961 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.11
CHGB-201ENST00000378961 ZRANB1Q9UGI0 708 aa15.71■□□□□ 0.11
CHGB-201ENST00000378961 TMPOP42166 694 aaKnown RBP15.71■□□□□ 0.1
CHGB-201ENST00000378961 NUCB1Q02818 461 aa15.71■□□□□ 0.1
CHGB-201ENST00000378961 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.1
CHGB-201ENST00000378961 AMOTL2Q9Y2J4 779 aa15.71■□□□□ 0.1
CHGB-201ENST00000378961 COL3A1P02461 1466 aaPredicted RBP15.7■□□□□ 0.1
CHGB-201ENST00000378961 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
CHGB-201ENST00000378961 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
CHGB-201ENST00000378961 PRR36Q9H6K5 1346 aa15.7■□□□□ 0.1
CHGB-201ENST00000378961 PNPLA6Q8IY17 1366 aa15.7■□□□□ 0.1
CHGB-201ENST00000378961 ZGPATQ8N5A5 531 aaKnown RBP15.7■□□□□ 0.1
CHGB-201ENST00000378961 SYCE3A1L190 88 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 AAMPQ13685 434 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 GPT2Q8TD30 523 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 TBX22Q9Y458 520 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 C17orf53Q8N3J3 647 aaPredicted RBP15.69■□□□□ 0.1
CHGB-201ENST00000378961 ZBTB40Q9NUA8 1239 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 LMBRD1Q9NUN5 540 aa15.69■□□□□ 0.1
CHGB-201ENST00000378961 FOXD4L6Q3SYB3 417 aaPredicted RBP15.68■□□□□ 0.1
CHGB-201ENST00000378961 FOXD4L3Q6VB84 417 aaPredicted RBP15.68■□□□□ 0.1
CHGB-201ENST00000378961 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
CHGB-201ENST00000378961 EMILIN1Q9Y6C2 1016 aa15.68■□□□□ 0.1
CHGB-201ENST00000378961 FCHSD2O94868 740 aa15.67■□□□□ 0.1
CHGB-201ENST00000378961 CDC42BPGQ6DT37 1551 aa15.67■□□□□ 0.1
CHGB-201ENST00000378961 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
CHGB-201ENST00000378961 PTPRUQ92729 1446 aa15.67■□□□□ 0.1
CHGB-201ENST00000378961 SLIT1O75093 1534 aa15.66■□□□□ 0.1
CHGB-201ENST00000378961 ZNF500O60304 480 aaPredicted RBP15.66■□□□□ 0.1
CHGB-201ENST00000378961 CBX1P83916 185 aa15.66■□□□□ 0.1
CHGB-201ENST00000378961 ACEP12821 1306 aa15.66■□□□□ 0.1
CHGB-201ENST00000378961 ZNF445P59923 1031 aa15.66■□□□□ 0.1
CHGB-201ENST00000378961 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
CHGB-201ENST00000378961 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
CHGB-201ENST00000378961 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
CHGB-201ENST00000378961 IGSF3O75054 1194 aa15.65■□□□□ 0.1
CHGB-201ENST00000378961 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
CHGB-201ENST00000378961 ADGRB2O60241 1585 aa15.65■□□□□ 0.1
CHGB-201ENST00000378961 HMOX1P09601 288 aa15.65■□□□□ 0.1
CHGB-201ENST00000378961 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
CHGB-201ENST00000378961 DNTTIP2Q5QJE6 756 aaKnown RBP15.64■□□□□ 0.09
CHGB-201ENST00000378961 PDLIM2Q96JY6 352 aa15.64■□□□□ 0.09
CHGB-201ENST00000378961 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.64■□□□□ 0.09
CHGB-201ENST00000378961 PLEKHG3A1L390 1219 aa15.63■□□□□ 0.09
CHGB-201ENST00000378961 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
CHGB-201ENST00000378961 BMP2KLQ5H9B9 411 aa15.63■□□□□ 0.09
CHGB-201ENST00000378961 MAP2P11137 1827 aaKnown RBP15.63■□□□□ 0.09
CHGB-201ENST00000378961 TTC21BQ7Z4L5 1316 aa15.63■□□□□ 0.09
CHGB-201ENST00000378961 PTMAP06454 111 aaKnown RBP15.63■□□□□ 0.09
CHGB-201ENST00000378961 SMAP1Q8IYB5 467 aaPredicted RBP15.63■□□□□ 0.09
CHGB-201ENST00000378961 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
CHGB-201ENST00000378961 APBB1O00213 710 aa15.62■□□□□ 0.09
CHGB-201ENST00000378961 C16orf71Q8IYS4 520 aaPredicted RBP15.62■□□□□ 0.09
CHGB-201ENST00000378961 MAP7D2Q96T17 732 aa15.62■□□□□ 0.09
CHGB-201ENST00000378961 KIF16BQ96L93 1317 aa15.62■□□□□ 0.09
CHGB-201ENST00000378961 IL13P35225 146 aa15.62■□□□□ 0.09
CHGB-201ENST00000378961 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
CHGB-201ENST00000378961 DYNC1I1O14576 645 aa15.61■□□□□ 0.09
CHGB-201ENST00000378961 SASS6Q6UVJ0 657 aa15.61■□□□□ 0.09
CHGB-201ENST00000378961 ZDHHC9Q9Y397 364 aa15.61■□□□□ 0.09
CHGB-201ENST00000378961 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
CHGB-201ENST00000378961 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
CHGB-201ENST00000378961 TERF1P54274 439 aa15.61■□□□□ 0.09
CHGB-201ENST00000378961 ZSCAN20P17040 1043 aaPredicted RBP15.6■□□□□ 0.09
CHGB-201ENST00000378961 NOL8Q76FK4 1167 aaKnown RBP15.6■□□□□ 0.09
CHGB-201ENST00000378961 ZNF710Q8N1W2 664 aa15.6■□□□□ 0.09
CHGB-201ENST00000378961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.6■□□□□ 0.09
CHGB-201ENST00000378961 IL16Q14005 1332 aa15.6■□□□□ 0.09
CHGB-201ENST00000378961 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
CHGB-201ENST00000378961 PTMSP20962 102 aa15.6■□□□□ 0.09
CHGB-201ENST00000378961 SIRT2Q8IXJ6 389 aa15.6■□□□□ 0.09
CHGB-201ENST00000378961 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
CHGB-201ENST00000378961 OTUD7AQ8TE49 926 aaPredicted RBP15.6■□□□□ 0.09
CHGB-201ENST00000378961 AKAP12Q02952 1782 aa15.59■□□□□ 0.09
CHGB-201ENST00000378961 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
CHGB-201ENST00000378961 PHACTR3Q96KR7 559 aa15.59■□□□□ 0.09
CHGB-201ENST00000378961 THUMPD2Q9BTF0 503 aaKnown RBP15.59■□□□□ 0.09
CHGB-201ENST00000378961 ATP2B3Q16720 1220 aa15.59■□□□□ 0.09
CHGB-201ENST00000378961 CDK12Q9NYV4 1490 aaPredicted RBP15.58■□□□□ 0.09
CHGB-201ENST00000378961 SOX12O15370 315 aa15.58■□□□□ 0.09
CHGB-201ENST00000378961 NFE2L2Q16236 605 aa15.58■□□□□ 0.09
CHGB-201ENST00000378961 GDPD2Q9HCC8 539 aa15.58■□□□□ 0.09
CHGB-201ENST00000378961 KCNA6P17658 529 aa15.58■□□□□ 0.08
CHGB-201ENST00000378961 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.08
CHGB-201ENST00000378961 PTCH1Q13635 1447 aa15.58■□□□□ 0.08
CHGB-201ENST00000378961 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
CHGB-201ENST00000378961 LRRC7Q96NW7 1537 aa15.57■□□□□ 0.08
CHGB-201ENST00000378961 USP6P35125 1406 aa15.57■□□□□ 0.08
CHGB-201ENST00000378961 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
CHGB-201ENST00000378961 CYP2E1P05181 493 aaPredicted RBP15.57■□□□□ 0.08
CHGB-201ENST00000378961 CLEC17AQ6ZS10 378 aa15.57■□□□□ 0.08
CHGB-201ENST00000378961 DMTNQ08495 405 aa15.56■□□□□ 0.08
CHGB-201ENST00000378961 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
CHGB-201ENST00000378961 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
CHGB-201ENST00000378961 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
CHGB-201ENST00000378961 LRSAM1Q6UWE0 723 aa15.56■□□□□ 0.08
CHGB-201ENST00000378961 CDC45O75419 566 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms