RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 CYP27B1O15528 508 aa18■□□□□ 0.47
CCL19-202ENST00000378800 IL13P35225 146 aa18■□□□□ 0.47
CCL19-202ENST00000378800 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
CCL19-202ENST00000378800 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
CCL19-202ENST00000378800 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
CCL19-202ENST00000378800 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
CCL19-202ENST00000378800 PARD3Q8TEW0 1356 aa17.99■□□□□ 0.47
CCL19-202ENST00000378800 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
CCL19-202ENST00000378800 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
CCL19-202ENST00000378800 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
CCL19-202ENST00000378800 RGPD2P0DJD1 1756 aa17.98■□□□□ 0.47
CCL19-202ENST00000378800 R3HDM1Q15032 1099 aaKnown RBP17.97■□□□□ 0.47
CCL19-202ENST00000378800 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
CCL19-202ENST00000378800 MAP2P11137 1827 aaKnown RBP17.96■□□□□ 0.47
CCL19-202ENST00000378800 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
CCL19-202ENST00000378800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCL19-202ENST00000378800 SPG7Q9UQ90 795 aa17.96■□□□□ 0.47
CCL19-202ENST00000378800 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.46
CCL19-202ENST00000378800 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.46
CCL19-202ENST00000378800 TXNRD1Q16881 649 aa17.95■□□□□ 0.46
CCL19-202ENST00000378800 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
CCL19-202ENST00000378800 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
CCL19-202ENST00000378800 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
CCL19-202ENST00000378800 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
CCL19-202ENST00000378800 PHKG2P15735 406 aa17.92■□□□□ 0.46
CCL19-202ENST00000378800 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
CCL19-202ENST00000378800 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
CCL19-202ENST00000378800 ANO8Q9HCE9 1232 aaPredicted RBP17.92■□□□□ 0.46
CCL19-202ENST00000378800 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
CCL19-202ENST00000378800 LRRC4BQ9NT99 713 aa17.91■□□□□ 0.46
CCL19-202ENST00000378800 HMOX1P09601 288 aa17.9■□□□□ 0.46
CCL19-202ENST00000378800 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
CCL19-202ENST00000378800 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
CCL19-202ENST00000378800 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
CCL19-202ENST00000378800 KCNQ4P56696 695 aa17.89■□□□□ 0.45
CCL19-202ENST00000378800 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
CCL19-202ENST00000378800 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
CCL19-202ENST00000378800 PIGBQ92521 554 aa17.88■□□□□ 0.45
CCL19-202ENST00000378800 KDRP35968 1356 aa17.88■□□□□ 0.45
CCL19-202ENST00000378800 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
CCL19-202ENST00000378800 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
CCL19-202ENST00000378800 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
CCL19-202ENST00000378800 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
CCL19-202ENST00000378800 PDGFDQ9GZP0 370 aaPredicted RBP17.85■□□□□ 0.45
CCL19-202ENST00000378800 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
CCL19-202ENST00000378800 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
CCL19-202ENST00000378800 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
CCL19-202ENST00000378800 SLC27A3Q5K4L6 730 aa17.84■□□□□ 0.45
CCL19-202ENST00000378800 CFAP53Q96M91 514 aa17.83■□□□□ 0.44
CCL19-202ENST00000378800 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
CCL19-202ENST00000378800 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
CCL19-202ENST00000378800 ASAP1Q9ULH1 1129 aa17.82■□□□□ 0.44
CCL19-202ENST00000378800 RREB1Q92766 1687 aa17.82■□□□□ 0.44
CCL19-202ENST00000378800 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
CCL19-202ENST00000378800 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
CCL19-202ENST00000378800 C1orf141Q5JVX7 400 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
CCL19-202ENST00000378800 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
CCL19-202ENST00000378800 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
CCL19-202ENST00000378800 BTAF1O14981 1849 aa17.79■□□□□ 0.44
CCL19-202ENST00000378800 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
CCL19-202ENST00000378800 LGR6Q9HBX8 967 aa17.79■□□□□ 0.44
CCL19-202ENST00000378800 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
CCL19-202ENST00000378800 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
CCL19-202ENST00000378800 AKAP4Q5JQC9 854 aa17.78■□□□□ 0.44
CCL19-202ENST00000378800 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
CCL19-202ENST00000378800 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
CCL19-202ENST00000378800 KDM6AO15550 1401 aaPredicted RBP17.78■□□□□ 0.44
CCL19-202ENST00000378800 DOT1LQ8TEK3 1739 aa17.78■□□□□ 0.44
CCL19-202ENST00000378800 RGPD3A6NKT7 1758 aaPredicted RBP17.77■□□□□ 0.44
CCL19-202ENST00000378800 RGPD4Q7Z3J3 1758 aa17.77■□□□□ 0.44
CCL19-202ENST00000378800 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.44
CCL19-202ENST00000378800 CABP4P57796 275 aa17.77■□□□□ 0.44
CCL19-202ENST00000378800 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCL19-202ENST00000378800 NFATC2IPQ8NCF5 419 aa17.77■□□□□ 0.44
CCL19-202ENST00000378800 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
CCL19-202ENST00000378800 RALBP1Q15311 655 aa17.76■□□□□ 0.43
CCL19-202ENST00000378800 ZBTB7AO95365 584 aa17.75■□□□□ 0.43
CCL19-202ENST00000378800 PRKAR2BP31323 418 aa17.75■□□□□ 0.43
CCL19-202ENST00000378800 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
CCL19-202ENST00000378800 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
CCL19-202ENST00000378800 SIK1P57059 783 aa17.74■□□□□ 0.43
CCL19-202ENST00000378800 TOGARAM1Q9Y4F4 1720 aa17.74■□□□□ 0.43
CCL19-202ENST00000378800 FCHSD2O94868 740 aa17.73■□□□□ 0.43
CCL19-202ENST00000378800 ITPK1Q13572 414 aa17.73■□□□□ 0.43
CCL19-202ENST00000378800 SLC4A9Q96Q91 983 aa17.73■□□□□ 0.43
CCL19-202ENST00000378800 SPON1Q9HCB6 807 aa17.73■□□□□ 0.43
CCL19-202ENST00000378800 TFCP2L1Q9NZI6 479 aa17.73■□□□□ 0.43
CCL19-202ENST00000378800 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
CCL19-202ENST00000378800 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
CCL19-202ENST00000378800 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
CCL19-202ENST00000378800 IL17REQ8NFR9 667 aa17.72■□□□□ 0.43
CCL19-202ENST00000378800 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
CCL19-202ENST00000378800 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
CCL19-202ENST00000378800 SLC52A2Q9HAB3 445 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms