RNA–Protein interactions for RNA: ENST00000378603.7

DDB2-204, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-204ENST00000378603 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
DDB2-204ENST00000378603 IL13P35225 146 aa15.3■□□□□ 0.04
DDB2-204ENST00000378603 ZCRB1Q8TBF4 217 aaKnown RBP15.3■□□□□ 0.04
DDB2-204ENST00000378603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.043e-7■□□□□ 10.1
DDB2-204ENST00000378603 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
DDB2-204ENST00000378603 USHBP1Q8N6Y0 703 aa15.29■□□□□ 0.04
DDB2-204ENST00000378603 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
DDB2-204ENST00000378603 KDRP35968 1356 aa15.28■□□□□ 0.04
DDB2-204ENST00000378603 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
DDB2-204ENST00000378603 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
DDB2-204ENST00000378603 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
DDB2-204ENST00000378603 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
DDB2-204ENST00000378603 RGPD3A6NKT7 1758 aaPredicted RBP15.28■□□□□ 0.04
DDB2-204ENST00000378603 RGPD4Q7Z3J3 1758 aa15.28■□□□□ 0.04
DDB2-204ENST00000378603 FAM182BQ5T319 152 aa15.27■□□□□ 0.04
DDB2-204ENST00000378603 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
DDB2-204ENST00000378603 AMOTQ4VCS5 1084 aa15.26■□□□□ 0.03
DDB2-204ENST00000378603 BAG6P46379 1132 aa15.25■□□□□ 0.03
DDB2-204ENST00000378603 DDX54Q8TDD1 881 aaKnown RBP15.25■□□□□ 0.03
DDB2-204ENST00000378603 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
DDB2-204ENST00000378603 MYBBP1AQ9BQG0 1328 aaKnown RBP15.24■□□□□ 0.03
DDB2-204ENST00000378603 TRIM37O94972 964 aa15.24■□□□□ 0.03
DDB2-204ENST00000378603 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
DDB2-204ENST00000378603 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
DDB2-204ENST00000378603 KAT6BQ8WYB5 2073 aa15.24■□□□□ 0.03
DDB2-204ENST00000378603 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
DDB2-204ENST00000378603 IFNL2Q8IZJ0 200 aa15.22■□□□□ 0.03
DDB2-204ENST00000378603 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
DDB2-204ENST00000378603 BTAF1O14981 1849 aa15.22■□□□□ 0.03
DDB2-204ENST00000378603 ITGB4P16144 1822 aa15.22■□□□□ 0.03
DDB2-204ENST00000378603 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
DDB2-204ENST00000378603 U2SURPO15042 1029 aaKnown RBP15.21■□□□□ 0.03
DDB2-204ENST00000378603 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
DDB2-204ENST00000378603 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
DDB2-204ENST00000378603 PLSCR1O15162 318 aa15.2■□□□□ 0.02
DDB2-204ENST00000378603 RREB1Q92766 1687 aa15.19■□□□□ 0.02
DDB2-204ENST00000378603 CYP27B1O15528 508 aa15.19■□□□□ 0.02
DDB2-204ENST00000378603 APBA3O96018 575 aa15.19■□□□□ 0.02
DDB2-204ENST00000378603 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
DDB2-204ENST00000378603 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
DDB2-204ENST00000378603 FCHSD2O94868 740 aa15.18■□□□□ 0.02
DDB2-204ENST00000378603 HMOX1P09601 288 aa15.18■□□□□ 0.02
DDB2-204ENST00000378603 PHKG2P15735 406 aa15.18■□□□□ 0.02
DDB2-204ENST00000378603 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
DDB2-204ENST00000378603 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
DDB2-204ENST00000378603 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
DDB2-204ENST00000378603 ANP32CO43423 234 aa15.16■□□□□ 0.02
DDB2-204ENST00000378603 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
DDB2-204ENST00000378603 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
DDB2-204ENST00000378603 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.023e-6■■■■□ 20.8
DDB2-204ENST00000378603 ACSBG1Q96GR2 724 aa15.16■□□□□ 0.02
DDB2-204ENST00000378603 DCAF5Q96JK2 942 aa15.16■□□□□ 0.02
DDB2-204ENST00000378603 LY75O60449 1722 aa15.16■□□□□ 0.02
DDB2-204ENST00000378603 NEFMP07197 916 aa15.15■□□□□ 0.02
DDB2-204ENST00000378603 EN1Q05925 392 aaPredicted RBP15.15■□□□□ 0.02
DDB2-204ENST00000378603 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
DDB2-204ENST00000378603 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
DDB2-204ENST00000378603 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
DDB2-204ENST00000378603 CAMKK2Q96RR4 588 aa15.15■□□□□ 0.02
DDB2-204ENST00000378603 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
DDB2-204ENST00000378603 ADAMTS7Q9UKP4 1686 aa15.14■□□□□ 0.01
DDB2-204ENST00000378603 ERVV-2B6SEH9 535 aa15.14■□□□□ 0.01
DDB2-204ENST00000378603 KCNQ2O43526 872 aa15.14■□□□□ 0.01
DDB2-204ENST00000378603 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
DDB2-204ENST00000378603 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
DDB2-204ENST00000378603 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
DDB2-204ENST00000378603 NUP188Q5SRE5 1749 aa15.14■□□□□ 0.01
DDB2-204ENST00000378603 PRKAR2BP31323 418 aa15.12■□□□□ 0.01
DDB2-204ENST00000378603 EZH2Q15910 746 aaKnown RBP15.12■□□□□ 0.01
DDB2-204ENST00000378603 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
DDB2-204ENST00000378603 DLG5Q8TDM6 1919 aa15.11■□□□□ 0.01
DDB2-204ENST00000378603 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
DDB2-204ENST00000378603 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
DDB2-204ENST00000378603 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
DDB2-204ENST00000378603 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
DDB2-204ENST00000378603 ZNF831Q5JPB2 1677 aa15.09■□□□□ 0.01
DDB2-204ENST00000378603 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
DDB2-204ENST00000378603 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDB2-204ENST00000378603 SLC27A3Q5K4L6 730 aa15.09■□□□□ 0.01
DDB2-204ENST00000378603 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
DDB2-204ENST00000378603 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
DDB2-204ENST00000378603 TXNRD1Q16881 649 aa15.08■□□□□ 0
DDB2-204ENST00000378603 NBPF14Q5TI25 921 aa15.08■□□□□ 0
DDB2-204ENST00000378603 MRC1P22897 1456 aa15.08■□□□□ 0
DDB2-204ENST00000378603 SIPA1L3O60292 1781 aaPredicted RBP15.07■□□□□ 0
DDB2-204ENST00000378603 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
DDB2-204ENST00000378603 CABP4P57796 275 aa15.07■□□□□ 0
DDB2-204ENST00000378603 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
DDB2-204ENST00000378603 TAF1LQ8IZX4 1826 aa15.07■□□□□ 0
DDB2-204ENST00000378603 MAPK8IP3Q9UPT6 1336 aa15.07■□□□□ 0
DDB2-204ENST00000378603 RNMTO43148 476 aaKnown RBP15.06■□□□□ 0
DDB2-204ENST00000378603 PIGBQ92521 554 aa15.06■□□□□ 0
DDB2-204ENST00000378603 PHACTR3Q96KR7 559 aa15.06■□□□□ 0
DDB2-204ENST00000378603 PROM2Q8N271 834 aa15.05■□□□□ -0
DDB2-204ENST00000378603 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
DDB2-204ENST00000378603 SLC52A2Q9HAB3 445 aa15.05■□□□□ -0
DDB2-204ENST00000378603 PALLDQ8WX93 1383 aa15.05■□□□□ -0
DDB2-204ENST00000378603 PAPPAQ13219 1627 aa15.05■□□□□ -0
DDB2-204ENST00000378603 C5P01031 1676 aa15.05■□□□□ -0
DDB2-204ENST00000378603 QSER1Q2KHR3 1735 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms