RNA–Protein interactions for RNA: ENST00000378154.1

CASK-201, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 5 BASIC

Gene CASK, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-201ENST00000378154 TRAK2O60296 914 aa28.31■■■□□ 2.12
CASK-201ENST00000378154 MSH6P52701 1360 aa28.31■■■□□ 2.12
CASK-201ENST00000378154 APBB1O00213 710 aa28.31■■■□□ 2.12
CASK-201ENST00000378154 CDC45O75419 566 aa28.31■■■□□ 2.12
CASK-201ENST00000378154 ANKRD44Q8N8A2 993 aa28.31■■■□□ 2.12
CASK-201ENST00000378154 MEIS3Q99687 375 aa28.31■■■□□ 2.12
CASK-201ENST00000378154 CEP85Q6P2H3 762 aa28.3■■■□□ 2.12
CASK-201ENST00000378154 CRB1P82279 1406 aa28.3■■■□□ 2.12
CASK-201ENST00000378154 USP31Q70CQ4 1352 aa28.29■■■□□ 2.12
CASK-201ENST00000378154 PLEKHG1Q9ULL1 1385 aa28.29■■■□□ 2.12
CASK-201ENST00000378154 PLPPR3Q6T4P5 718 aa28.29■■■□□ 2.12
CASK-201ENST00000378154 TOPAZ1Q8N9V7 1692 aa28.29■■■□□ 2.12
CASK-201ENST00000378154 SMARCA5O60264 1052 aaPredicted RBP28.29■■■□□ 2.12
CASK-201ENST00000378154 SLC4A2P04920 1241 aa28.29■■■□□ 2.12
CASK-201ENST00000378154 MTHFSDQ2M296 383 aaKnown RBP28.29■■■□□ 2.12
CASK-201ENST00000378154 KIF13AQ9H1H9 1805 aa28.28■■■□□ 2.12
CASK-201ENST00000378154 KIAA0232Q92628 1395 aa28.28■■■□□ 2.12
CASK-201ENST00000378154 SSH2Q76I76 1423 aa28.27■■■□□ 2.12
CASK-201ENST00000378154 TTC22Q5TAA0 569 aa28.27■■■□□ 2.12
CASK-201ENST00000378154 TNPO1Q92973 898 aaKnown RBP28.27■■■□□ 2.12
CASK-201ENST00000378154 ANO8Q9HCE9 1232 aaPredicted RBP28.27■■■□□ 2.12
CASK-201ENST00000378154 AMOTL2Q9Y2J4 779 aa28.27■■■□□ 2.12
CASK-201ENST00000378154 RTL1A6NKG5 1358 aa28.26■■■□□ 2.12
CASK-201ENST00000378154 G2E3Q7L622 706 aa28.26■■■□□ 2.11
CASK-201ENST00000378154 RGPD1P0DJD0 1748 aa28.25■■■□□ 2.11
CASK-201ENST00000378154 F6X3S4 739 aa28.24■■■□□ 2.11
CASK-201ENST00000378154 XRCC6P12956 609 aaKnown RBP eCLIP28.24■■■□□ 2.11
CASK-201ENST00000378154 L1TD1Q5T7N2 865 aaKnown RBP28.24■■■□□ 2.11
CASK-201ENST00000378154 RPAP2Q8IXW5 612 aaPredicted RBP28.24■■■□□ 2.11
CASK-201ENST00000378154 PTPRCP08575 1304 aa28.23■■■□□ 2.11
CASK-201ENST00000378154 FSD2A1L4K1 749 aa28.23■■■□□ 2.11
CASK-201ENST00000378154 HAP1P54257 671 aaPredicted RBP28.23■■■□□ 2.11
CASK-201ENST00000378154 NALCNQ8IZF0 1738 aa28.23■■■□□ 2.11
CASK-201ENST00000378154 RIMS1Q86UR5 1692 aaKnown RBP28.23■■■□□ 2.11
CASK-201ENST00000378154 K7ELQ4 463 aaPredicted RBP28.23■■■□□ 2.11
CASK-201ENST00000378154 GOLGA6L3A6NEY3 463 aa28.22■■■□□ 2.11
CASK-201ENST00000378154 HSP90AA1P07900 732 aaKnown RBP28.22■■■□□ 2.11
CASK-201ENST00000378154 TSPYL4Q9UJ04 414 aa28.22■■■□□ 2.11
CASK-201ENST00000378154 SLC4A10Q6U841 1118 aa28.21■■■□□ 2.11
CASK-201ENST00000378154 GAS2L2Q8NHY3 880 aa28.21■■■□□ 2.11
CASK-201ENST00000378154 EYA1Q99502 592 aa28.21■■■□□ 2.11
CASK-201ENST00000378154 NGDNQ8NEJ9 315 aaKnown RBP28.2■■■□□ 2.11
CASK-201ENST00000378154 ARHGEF10O15013 1369 aa28.2■■■□□ 2.11
CASK-201ENST00000378154 PANK2Q9BZ23 570 aa28.2■■■□□ 2.1
CASK-201ENST00000378154 DDX11L8A8MPP1 907 aa28.19■■■□□ 2.1
CASK-201ENST00000378154 RAB3GAP1Q15042 981 aa28.19■■■□□ 2.1
CASK-201ENST00000378154 RTF1Q92541 710 aaKnown RBP28.19■■■□□ 2.1
CASK-201ENST00000378154 SDSP20132 328 aa28.18■■■□□ 2.1
CASK-201ENST00000378154 EID1Q9Y6B2 187 aa28.18■■■□□ 2.1
CASK-201ENST00000378154 AMPHP49418 695 aa28.18■■■□□ 2.1
CASK-201ENST00000378154 CIZ1Q9ULV3 898 aaPredicted RBP28.18■■■□□ 2.1
CASK-201ENST00000378154 FLT4P35916 1363 aa28.17■■■□□ 2.1
CASK-201ENST00000378154 NUTM2GQ5VZR2 741 aa28.17■■■□□ 2.1
CASK-201ENST00000378154 TTC21AQ8NDW8 1320 aa28.17■■■□□ 2.1
CASK-201ENST00000378154 CEP170BQ9Y4F5 1589 aaPredicted RBP28.17■■■□□ 2.1
CASK-201ENST00000378154 SBNO1A3KN83 1393 aa28.16■■■□□ 2.1
CASK-201ENST00000378154 USP26Q9BXU7 913 aa28.16■■■□□ 2.1
CASK-201ENST00000378154 FAM43AQ8N2R8 423 aa28.14■■■□□ 2.1
CASK-201ENST00000378154 KDRP35968 1356 aa28.14■■■□□ 2.1
CASK-201ENST00000378154 NECTIN2Q92692 538 aa28.13■■■□□ 2.09
CASK-201ENST00000378154 IGSF1Q8N6C5 1336 aa28.13■■■□□ 2.09
CASK-201ENST00000378154 SSFA2P28290 1259 aa28.13■■■□□ 2.09
CASK-201ENST00000378154 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.12■■■□□ 2.09
CASK-201ENST00000378154 NLRP6P59044 892 aa28.12■■■□□ 2.09
CASK-201ENST00000378154 RGPD8O14715 1765 aaPredicted RBP28.11■■■□□ 2.09
CASK-201ENST00000378154 TBX22Q9Y458 520 aa28.11■■■□□ 2.09
CASK-201ENST00000378154 GBP4Q96PP9 640 aa28.1■■■□□ 2.09
CASK-201ENST00000378154 FMN2Q9NZ56 1722 aa28.09■■■□□ 2.09
CASK-201ENST00000378154 RABEP1Q15276 862 aa28.08■■■□□ 2.09
CASK-201ENST00000378154 RRAGDQ9NQL2 400 aaPredicted RBP28.08■■■□□ 2.09
CASK-201ENST00000378154 EXOC6BQ9Y2D4 811 aa28.08■■■□□ 2.09
CASK-201ENST00000378154 DIP2AQ14689 1571 aa28.08■■■□□ 2.09
CASK-201ENST00000378154 CCT4P50991 539 aaKnown RBP28.08■■■□□ 2.09
CASK-201ENST00000378154 TSHZ3Q63HK5 1081 aa28.08■■■□□ 2.09
CASK-201ENST00000378154 LTV1Q96GA3 475 aaPredicted RBP28.07■■■□□ 2.08
CASK-201ENST00000378154 PIK3C2AO00443 1686 aa28.06■■■□□ 2.08
CASK-201ENST00000378154 HMMRO75330 724 aa28.06■■■□□ 2.08
CASK-201ENST00000378154 HOXC9P31274 260 aa28.04■■■□□ 2.08
CASK-201ENST00000378154 FLIIQ13045 1269 aa28.04■■■□□ 2.08
CASK-201ENST00000378154 STK31Q9BXU1 1019 aa28.04■■■□□ 2.08
CASK-201ENST00000378154 PDE1AP54750 535 aa28.04■■■□□ 2.08
CASK-201ENST00000378154 GAS2L3Q86XJ1 694 aa28.04■■■□□ 2.08
CASK-201ENST00000378154 FKBP5Q13451 457 aaPredicted RBP28.03■■■□□ 2.08
CASK-201ENST00000378154 IL17REQ8NFR9 667 aa28.03■■■□□ 2.08
CASK-201ENST00000378154 ARHGAP23Q9P227 1491 aa28.03■■■□□ 2.08
CASK-201ENST00000378154 GNAT3A8MTJ3 354 aa28.03■■■□□ 2.08
CASK-201ENST00000378154 GNAI2P04899 355 aa28.03■■■□□ 2.08
CASK-201ENST00000378154 KCNA6P17658 529 aa28.02■■■□□ 2.08
CASK-201ENST00000378154 GRPEL1Q9HAV7 217 aa28.02■■■□□ 2.08
CASK-201ENST00000378154 SLIT1O75093 1534 aa28.02■■■□□ 2.08
CASK-201ENST00000378154 PNMA6EA0A0J9YXQ4 647 aa28.02■■■□□ 2.08
CASK-201ENST00000378154 MRE11P49959 708 aa28.02■■■□□ 2.08
CASK-201ENST00000378154 CASC1Q6TDU7 716 aa28.01■■■□□ 2.08
CASK-201ENST00000378154 USHBP1Q8N6Y0 703 aa28.01■■■□□ 2.07
CASK-201ENST00000378154 PKP1Q13835 747 aa28■■■□□ 2.07
CASK-201ENST00000378154 CCDC30Q5VVM6 783 aa27.99■■■□□ 2.07
CASK-201ENST00000378154 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
CASK-201ENST00000378154 OSBPL3Q9H4L5 887 aa27.99■■■□□ 2.07
CASK-201ENST00000378154 BAG4O95429 457 aaKnown RBP27.98■■■□□ 2.07
CASK-201ENST00000378154 AK9Q5TCS8 1911 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms