RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 NOL7Q9UMY1 257 aaKnown RBP19.2■□□□□ 0.66
RGP1-201ENST00000378078 EZRP15311 586 aaKnown RBP19.2■□□□□ 0.66
RGP1-201ENST00000378078 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 ZNF354CQ86Y25 554 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 PDZRN3Q9UPQ7 1066 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 KIAA0754O94854 1291 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 CCDC178Q5BJE1 867 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 JAKMIP1Q96N16 626 aaKnown RBP19.2■□□□□ 0.66
RGP1-201ENST00000378078 LARP6Q9BRS8 491 aaKnown RBP19.2■□□□□ 0.66
RGP1-201ENST00000378078 MKNK2Q9HBH9 465 aa19.2■□□□□ 0.66
RGP1-201ENST00000378078 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
RGP1-201ENST00000378078 SEC63Q9UGP8 760 aaKnown RBP19.19■□□□□ 0.66
RGP1-201ENST00000378078 VAT1LQ9HCJ6 419 aa19.19■□□□□ 0.66
RGP1-201ENST00000378078 NF2P35240 595 aa19.19■□□□□ 0.66
RGP1-201ENST00000378078 METTL24Q5JXM2 366 aa19.19■□□□□ 0.66
RGP1-201ENST00000378078 MPRIPQ6WCQ1 1025 aa19.19■□□□□ 0.66
RGP1-201ENST00000378078 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
RGP1-201ENST00000378078 LARP1BQ659C4 914 aaKnown RBP19.18■□□□□ 0.66
RGP1-201ENST00000378078 GNAI3P08754 354 aa19.18■□□□□ 0.66
RGP1-201ENST00000378078 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.18■□□□□ 0.66
RGP1-201ENST00000378078 BMP2KQ9NSY1 1161 aaPredicted RBP19.18■□□□□ 0.66
RGP1-201ENST00000378078 HIP1O00291 1037 aa19.18■□□□□ 0.66
RGP1-201ENST00000378078 PPFIA3O75145 1194 aa19.18■□□□□ 0.66
RGP1-201ENST00000378078 TRIM21P19474 475 aaKnown RBP19.18■□□□□ 0.66
RGP1-201ENST00000378078 PPP4R3AQ6IN85 833 aa19.18■□□□□ 0.66
RGP1-201ENST00000378078 CCDC102AQ96A19 550 aa19.18■□□□□ 0.66
RGP1-201ENST00000378078 PUF60Q9UHX1 559 aaKnown RBP19.17■□□□□ 0.66
RGP1-201ENST00000378078 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
RGP1-201ENST00000378078 WIZO95785 1651 aa19.17■□□□□ 0.66
RGP1-201ENST00000378078 PDRG1Q9NUG6 133 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 ZBTB9Q96C00 473 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 CABP1Q9NZU7 370 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 TCP11L2Q8N4U5 519 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 DYDC1Q8WWB3 177 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
RGP1-201ENST00000378078 LETM1O95202 739 aaPredicted RBP19.15■□□□□ 0.66
RGP1-201ENST00000378078 CFAP70Q5T0N1 1121 aa19.15■□□□□ 0.66
RGP1-201ENST00000378078 TNIP1Q15025 636 aa19.15■□□□□ 0.66
RGP1-201ENST00000378078 DZIP1Q86YF9 867 aaKnown RBP19.15■□□□□ 0.66
RGP1-201ENST00000378078 JAKMIP3Q5VZ66 844 aa19.15■□□□□ 0.66
RGP1-201ENST00000378078 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
RGP1-201ENST00000378078 SMARCA5O60264 1052 aaPredicted RBP19.14■□□□□ 0.66
RGP1-201ENST00000378078 FERMT2Q96AC1 680 aa19.14■□□□□ 0.66
RGP1-201ENST00000378078 MRPS9P82933 396 aaKnown RBP19.14■□□□□ 0.65
RGP1-201ENST00000378078 ZNF622Q969S3 477 aaKnown RBP eCLIP19.14■□□□□ 0.65
RGP1-201ENST00000378078 RANBP6O60518 1105 aaKnown RBP19.14■□□□□ 0.65
RGP1-201ENST00000378078 SPATA32Q96LK8 384 aa19.14■□□□□ 0.65
RGP1-201ENST00000378078 DACH1Q9UI36 760 aa19.14■□□□□ 0.65
RGP1-201ENST00000378078 CLEC11AQ9Y240 323 aa19.14■□□□□ 0.65
RGP1-201ENST00000378078 RPGRQ92834 1020 aaKnown RBP19.14■□□□□ 0.65
RGP1-201ENST00000378078 USP8P40818 1118 aa19.13■□□□□ 0.65
RGP1-201ENST00000378078 LUC7LQ9NQ29 371 aaKnown RBP19.13■□□□□ 0.65
RGP1-201ENST00000378078 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
RGP1-201ENST00000378078 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
RGP1-201ENST00000378078 CASTP20810 708 aaKnown RBP19.13■□□□□ 0.65
RGP1-201ENST00000378078 MAP2K1Q02750 393 aaPredicted RBP19.13■□□□□ 0.65
RGP1-201ENST00000378078 FILIP1Q7Z7B0 1213 aa19.13■□□□□ 0.65
RGP1-201ENST00000378078 RAB11FIP4Q86YS3 637 aa19.13■□□□□ 0.65
RGP1-201ENST00000378078 MYD88Q99836 296 aa19.13■□□□□ 0.65
RGP1-201ENST00000378078 TAF4BQ92750 862 aa19.12■□□□□ 0.65
RGP1-201ENST00000378078 ZSCAN25Q6NSZ9 544 aa19.12■□□□□ 0.65
RGP1-201ENST00000378078 TICAM2Q86XR7 235 aa19.12■□□□□ 0.65
RGP1-201ENST00000378078 SRRTQ9BXP5 876 aaKnown RBP19.12■□□□□ 0.65
RGP1-201ENST00000378078 SAMM50Q9Y512 469 aa19.12■□□□□ 0.65
RGP1-201ENST00000378078 POTEJP0CG39 1038 aa19.12■□□□□ 0.65
RGP1-201ENST00000378078 JMYQ8N9B5 988 aa19.11■□□□□ 0.65
RGP1-201ENST00000378078 GPTP24298 496 aa19.11■□□□□ 0.65
RGP1-201ENST00000378078 PIP4K2AP48426 406 aaPredicted RBP19.11■□□□□ 0.65
RGP1-201ENST00000378078 ISM2Q6H9L7 571 aa19.11■□□□□ 0.65
RGP1-201ENST00000378078 CCP110O43303 1012 aa19.1■□□□□ 0.65
RGP1-201ENST00000378078 CPLX3Q8WVH0 158 aa19.1■□□□□ 0.65
RGP1-201ENST00000378078 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
RGP1-201ENST00000378078 CCDC192P0DO97 292 aa19.1■□□□□ 0.65
RGP1-201ENST00000378078 DPH6Q7L8W6 267 aa19.1■□□□□ 0.65
RGP1-201ENST00000378078 CEP63Q96MT8 703 aa19.1■□□□□ 0.65
RGP1-201ENST00000378078 BRPF3Q9ULD4 1205 aa19.1■□□□□ 0.65
RGP1-201ENST00000378078 ARL1P40616 181 aaPredicted RBP19.1■□□□□ 0.65
RGP1-201ENST00000378078 GSTTP1A0A1W2PQM5 241 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 TMCO5BA8MYB1 307 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 CAVIN4Q5BKX8 364 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 ZFP91Q96JP5 570 aaPredicted RBP19.09■□□□□ 0.65
RGP1-201ENST00000378078 EPB41L2O43491 1005 aaKnown RBP19.09■□□□□ 0.65
RGP1-201ENST00000378078 F8W031 263 aaPredicted RBP19.09■□□□□ 0.65
RGP1-201ENST00000378078 CTNNA2P26232 953 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 C6orf229H3BNL8 230 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 WDHD1O75717 1129 aaPredicted RBP19.09■□□□□ 0.65
RGP1-201ENST00000378078 SRCIN1Q9C0H9 1055 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 HOMER2Q9NSB8 354 aa19.09■□□□□ 0.65
RGP1-201ENST00000378078 CCDC91Q7Z6B0 441 aa19.08■□□□□ 0.65
RGP1-201ENST00000378078 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.65
RGP1-201ENST00000378078 SMC1AQ14683 1233 aaKnown RBP19.08■□□□□ 0.65
RGP1-201ENST00000378078 FEZ1Q99689 392 aa19.08■□□□□ 0.65
RGP1-201ENST00000378078 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.65
RGP1-201ENST00000378078 BLOC1S2Q6QNY1 142 aa19.08■□□□□ 0.65
RGP1-201ENST00000378078 CCDC150Q8NCX0 1101 aa19.08■□□□□ 0.65
RGP1-201ENST00000378078 SLC12A5Q9H2X9 1139 aa19.08■□□□□ 0.64
RGP1-201ENST00000378078 BOLA2Q9H3K6 86 aa19.08■□□□□ 0.64
RGP1-201ENST00000378078 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms