RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 SLKQ9H2G2 1235 aaPredicted RBP30.15■■■□□ 2.42
SNX5-201ENST00000377759 BMP2KLQ5H9B9 411 aa30.15■■■□□ 2.42
SNX5-201ENST00000377759 KCNA6P17658 529 aa30.13■■■□□ 2.41
SNX5-201ENST00000377759 GSE1Q14687 1217 aa30.13■■■□□ 2.41
SNX5-201ENST00000377759 HAP1P54257 671 aaPredicted RBP30.12■■■□□ 2.41
SNX5-201ENST00000377759 EYA1Q99502 592 aa30.12■■■□□ 2.41
SNX5-201ENST00000377759 IGSF1Q8N6C5 1336 aa30.11■■■□□ 2.41
SNX5-201ENST00000377759 ANKARQ7Z5J8 1434 aa30.11■■■□□ 2.41
SNX5-201ENST00000377759 RIMS1Q86UR5 1692 aaKnown RBP30.11■■■□□ 2.41
SNX5-201ENST00000377759 CEP170BQ9Y4F5 1589 aaPredicted RBP30.11■■■□□ 2.41
SNX5-201ENST00000377759 AMPHP49418 695 aa30.1■■■□□ 2.41
SNX5-201ENST00000377759 MIS18AQ9NYP9 233 aa30.1■■■□□ 2.41
SNX5-201ENST00000377759 NLRP6P59044 892 aa30.07■■■□□ 2.4
SNX5-201ENST00000377759 RBM25P49756 843 aaKnown RBP30.07■■■□□ 2.4
SNX5-201ENST00000377759 ATP10DQ9P241 1426 aa30.06■■■□□ 2.4
SNX5-201ENST00000377759 DCTPP1Q9H773 170 aa30.06■■■□□ 2.4
SNX5-201ENST00000377759 PTPRCP08575 1304 aa30.05■■■□□ 2.4
SNX5-201ENST00000377759 MARF1Q9Y4F3 1742 aaKnown RBP30.05■■■□□ 2.4
SNX5-201ENST00000377759 RTF1Q92541 710 aaKnown RBP30.04■■■□□ 2.4
SNX5-201ENST00000377759 ANKRD44Q8N8A2 993 aa30.03■■■□□ 2.4
SNX5-201ENST00000377759 SLC4A2P04920 1241 aa30.02■■■□□ 2.4
SNX5-201ENST00000377759 NUTM2GQ5VZR2 741 aa30.02■■■□□ 2.4
SNX5-201ENST00000377759 TSPYL4Q9UJ04 414 aa30.02■■■□□ 2.4
SNX5-201ENST00000377759 HOXC9P31274 260 aa30.02■■■□□ 2.4
SNX5-201ENST00000377759 GAS2L2Q8NHY3 880 aa30.02■■■□□ 2.4
SNX5-201ENST00000377759 MSH6P52701 1360 aa30.01■■■□□ 2.39
SNX5-201ENST00000377759 NWD1Q149M9 1564 aa30■■■□□ 2.39
SNX5-201ENST00000377759 RTL1A6NKG5 1358 aa30■■■□□ 2.39
SNX5-201ENST00000377759 CEP85Q6P2H3 762 aa29.99■■■□□ 2.39
SNX5-201ENST00000377759 TBC1D9Q6ZT07 1266 aa29.99■■■□□ 2.39
SNX5-201ENST00000377759 USP54Q70EL1 1684 aa29.99■■■□□ 2.39
SNX5-201ENST00000377759 G2E3Q7L622 706 aa29.98■■■□□ 2.39
SNX5-201ENST00000377759 PLEKHM2Q8IWE5 1019 aa29.98■■■□□ 2.39
SNX5-201ENST00000377759 RPAP2Q8IXW5 612 aaPredicted RBP29.98■■■□□ 2.39
SNX5-201ENST00000377759 SPRYD3Q8NCJ5 442 aa29.98■■■□□ 2.39
SNX5-201ENST00000377759 MEIS3Q99687 375 aa29.98■■■□□ 2.39
SNX5-201ENST00000377759 HTATSF1O43719 755 aaKnown RBP29.97■■■□□ 2.39
SNX5-201ENST00000377759 ABTB2Q8N961 1025 aa29.96■■■□□ 2.39
SNX5-201ENST00000377759 GSPT1P15170 499 aaKnown RBP29.96■■■□□ 2.39
SNX5-201ENST00000377759 KIF2CQ99661 725 aa29.95■■■□□ 2.39
SNX5-201ENST00000377759 LRRC37A3O60309 1634 aa29.94■■■□□ 2.38
SNX5-201ENST00000377759 C16orf71Q8IYS4 520 aaPredicted RBP29.93■■■□□ 2.38
SNX5-201ENST00000377759 SNX21Q969T3 373 aa29.93■■■□□ 2.38
SNX5-201ENST00000377759 GNAT3A8MTJ3 354 aa29.92■■■□□ 2.38
SNX5-201ENST00000377759 F6X3S4 739 aa29.91■■■□□ 2.38
SNX5-201ENST00000377759 HSCBQ8IWL3 235 aa29.91■■■□□ 2.38
SNX5-201ENST00000377759 IL17REQ8NFR9 667 aa29.9■■■□□ 2.38
SNX5-201ENST00000377759 PHF8Q9UPP1 1060 aa29.9■■■□□ 2.38
SNX5-201ENST00000377759 CDC45O75419 566 aa29.89■■■□□ 2.38
SNX5-201ENST00000377759 NCOA3Q9Y6Q9 1424 aa29.89■■■□□ 2.38
SNX5-201ENST00000377759 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.37
SNX5-201ENST00000377759 TTC22Q5TAA0 569 aa29.88■■■□□ 2.37
SNX5-201ENST00000377759 OTUD7AQ8TE49 926 aaPredicted RBP29.88■■■□□ 2.37
SNX5-201ENST00000377759 LTV1Q96GA3 475 aaPredicted RBP29.88■■■□□ 2.37
SNX5-201ENST00000377759 CHMP5Q9NZZ3 219 aa29.88■■■□□ 2.37
SNX5-201ENST00000377759 MAP3K5Q99683 1374 aa29.86■■■□□ 2.37
SNX5-201ENST00000377759 CCT4P50991 539 aaKnown RBP29.86■■■□□ 2.37
SNX5-201ENST00000377759 ANKLE2Q86XL3 938 aa29.86■■■□□ 2.37
SNX5-201ENST00000377759 RBM33Q96EV2 1170 aaKnown RBP29.86■■■□□ 2.37
SNX5-201ENST00000377759 DDIT3P35638 169 aa29.85■■■□□ 2.37
SNX5-201ENST00000377759 SLC4A10Q6U841 1118 aa29.85■■■□□ 2.37
SNX5-201ENST00000377759 SMARCA5O60264 1052 aaPredicted RBP29.84■■■□□ 2.37
SNX5-201ENST00000377759 TRHP20396 242 aaPredicted RBP29.84■■■□□ 2.37
SNX5-201ENST00000377759 C14orf37Q86TY3 774 aa29.83■■■□□ 2.37
SNX5-201ENST00000377759 STK31Q9BXU1 1019 aa29.83■■■□□ 2.37
SNX5-201ENST00000377759 USHBP1Q8N6Y0 703 aa29.82■■■□□ 2.36
SNX5-201ENST00000377759 FLIIQ13045 1269 aa29.81■■■□□ 2.36
SNX5-201ENST00000377759 CCDC30Q5VVM6 783 aa29.81■■■□□ 2.36
SNX5-201ENST00000377759 CD2BP2O95400 341 aaKnown RBP29.8■■■□□ 2.36
SNX5-201ENST00000377759 TAF7Q15545 349 aaPredicted RBP29.8■■■□□ 2.36
SNX5-201ENST00000377759 IP6K1Q92551 441 aa29.8■■■□□ 2.36
SNX5-201ENST00000377759 MCM4P33991 863 aa29.8■■■□□ 2.36
SNX5-201ENST00000377759 BABAM1Q9NWV8 329 aa29.8■■■□□ 2.36
SNX5-201ENST00000377759 FAM208AQ9UK61 1670 aaKnown RBP29.8■■■□□ 2.36
SNX5-201ENST00000377759 NFAT5O94916 1531 aa29.8■■■□□ 2.36
SNX5-201ENST00000377759 APBB1O00213 710 aa29.79■■■□□ 2.36
SNX5-201ENST00000377759 LTN1O94822 1766 aa29.79■■■□□ 2.36
SNX5-201ENST00000377759 IL27Q8NEV9 243 aa29.78■■■□□ 2.36
SNX5-201ENST00000377759 RBM42Q9BTD8 480 aaKnown RBP29.78■■■□□ 2.36
SNX5-201ENST00000377759 HMMRO75330 724 aa29.78■■■□□ 2.36
SNX5-201ENST00000377759 NECTIN2Q92692 538 aa29.77■■■□□ 2.36
SNX5-201ENST00000377759 SOS1Q07889 1333 aaPredicted RBP29.77■■■□□ 2.36
SNX5-201ENST00000377759 ADGRL3Q9HAR2 1447 aa29.76■■■□□ 2.35
SNX5-201ENST00000377759 ZNF142P52746 1687 aaPredicted RBP29.76■■■□□ 2.35
SNX5-201ENST00000377759 SDSP20132 328 aa29.76■■■□□ 2.35
SNX5-201ENST00000377759 GNAI2P04899 355 aa29.75■■■□□ 2.35
SNX5-201ENST00000377759 FKBP5Q13451 457 aaPredicted RBP29.75■■■□□ 2.35
SNX5-201ENST00000377759 NBPF6Q5VWK0 638 aa29.75■■■□□ 2.35
SNX5-201ENST00000377759 NBPF4Q96M43 638 aa29.75■■■□□ 2.35
SNX5-201ENST00000377759 ESCO1Q5FWF5 840 aa29.74■■■□□ 2.35
SNX5-201ENST00000377759 BRPF3Q9ULD4 1205 aa29.74■■■□□ 2.35
SNX5-201ENST00000377759 CEMIPQ8WUJ3 1361 aa29.74■■■□□ 2.35
SNX5-201ENST00000377759 HSP90AB1P08238 724 aaKnown RBP29.72■■■□□ 2.35
SNX5-201ENST00000377759 PSME1Q06323 249 aa29.72■■■□□ 2.35
SNX5-201ENST00000377759 CACNA1FO60840 1977 aa29.72■■■□□ 2.35
SNX5-201ENST00000377759 USP26Q9BXU7 913 aa29.71■■■□□ 2.35
SNX5-201ENST00000377759 OSBPL3Q9H4L5 887 aa29.7■■■□□ 2.35
SNX5-201ENST00000377759 K7ELQ4 463 aaPredicted RBP29.7■■■□□ 2.34
SNX5-201ENST00000377759 EIF5BO60841 1220 aaKnown RBP29.7■■■□□ 2.34
SNX5-201ENST00000377759 GNAI3P08754 354 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms