RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 ADCY5O95622 1261 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 KCNJ4P48050 445 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 API5Q9BZZ5 524 aaKnown RBP14.68□□□□□ -0.06
SF1-204ENST00000377390 NUDT16Q96DE0 195 aaKnown RBP14.68□□□□□ -0.06
SF1-204ENST00000377390 CCDC9Q9Y3X0 531 aaKnown RBP14.68□□□□□ -0.06
SF1-204ENST00000377390 ATP10AO60312 1499 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 ERC2O15083 957 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 TTC22Q5TAA0 569 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 SIRT2Q8IXJ6 389 aa14.68□□□□□ -0.06
SF1-204ENST00000377390 RTEL1-TNFRSF6BF6WH68 1400 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 NPATQ14207 1427 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
SF1-204ENST00000377390 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
SF1-204ENST00000377390 PAXIP1Q6ZW49 1069 aaPredicted RBP14.67□□□□□ -0.06
SF1-204ENST00000377390 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
SF1-204ENST00000377390 PHACTR3Q96KR7 559 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 CFAP44Q96MT7 982 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 NPHP1O15259 732 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 HMGN5P82970 282 aaKnown RBP14.67□□□□□ -0.06
SF1-204ENST00000377390 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.67□□□□□ -0.06
SF1-204ENST00000377390 SHANK2Q9UPX8 1470 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
SF1-204ENST00000377390 EXOC6BQ9Y2D4 811 aa14.67□□□□□ -0.06
SF1-204ENST00000377390 TERF1P54274 439 aa14.66□□□□□ -0.06
SF1-204ENST00000377390 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
SF1-204ENST00000377390 VAMP4O75379 141 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 MAP4K4O95819 1239 aaPredicted RBP14.65□□□□□ -0.06
SF1-204ENST00000377390 GNAI1P63096 354 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
SF1-204ENST00000377390 MCM5P33992 734 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 ALDH1L2Q3SY69 923 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 HSP90AB2PQ58FF8 381 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 C8orf58Q8NAV2 365 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 DDX17Q92841 729 aaKnown RBP14.65□□□□□ -0.06
SF1-204ENST00000377390 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 ZMYM3Q14202 1370 aa14.65□□□□□ -0.06
SF1-204ENST00000377390 FOXO3O43524 673 aa14.64□□□□□ -0.07
SF1-204ENST00000377390 ESCO1Q5FWF5 840 aa14.64□□□□□ -0.07
SF1-204ENST00000377390 IFT57Q9NWB7 429 aa14.64□□□□□ -0.07
SF1-204ENST00000377390 GOLGA6L4A6NEF3 574 aa14.64□□□□□ -0.07
SF1-204ENST00000377390 GIMAP6Q6P9H5 292 aa14.64□□□□□ -0.07
SF1-204ENST00000377390 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
SF1-204ENST00000377390 MRPL50Q8N5N7 158 aaKnown RBP14.64□□□□□ -0.07
SF1-204ENST00000377390 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 CERS3Q8IU89 383 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 DDX54Q8TDD1 881 aaKnown RBP14.63□□□□□ -0.07
SF1-204ENST00000377390 ZDHHC9Q9Y397 364 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
SF1-204ENST00000377390 VPS37CA5D8V6 355 aaPredicted RBP14.63□□□□□ -0.07
SF1-204ENST00000377390 ABTB2Q8N961 1025 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 PDLIM2Q96JY6 352 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
SF1-204ENST00000377390 ADCY10Q96PN6 1610 aa14.62□□□□□ -0.07
SF1-204ENST00000377390 HMMRO75330 724 aa14.62□□□□□ -0.07
SF1-204ENST00000377390 LETM1O95202 739 aaPredicted RBP14.62□□□□□ -0.07
SF1-204ENST00000377390 MYRIPQ8NFW9 859 aa14.62□□□□□ -0.07
SF1-204ENST00000377390 GTPBP4Q9BZE4 634 aaKnown RBP14.62□□□□□ -0.07
SF1-204ENST00000377390 AMOTL2Q9Y2J4 779 aa14.62□□□□□ -0.07
SF1-204ENST00000377390 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 F6X3S4 739 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 BCL2L12Q9HB09 334 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 LTKP29376 864 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 MEIS3Q99687 375 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 DIAPH3Q9NSV4 1193 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 ABCC11Q96J66 1382 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 PREX2Q70Z35 1606 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 KIF20AO95235 890 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 TNNT3P45378 269 aaPredicted RBP14.61□□□□□ -0.07
SF1-204ENST00000377390 ZC3H6P61129 1189 aaKnown RBP14.61□□□□□ -0.07
SF1-204ENST00000377390 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 ZNF518AQ6AHZ1 1483 aa14.61□□□□□ -0.07
SF1-204ENST00000377390 HSPA2P54652 639 aa14.6□□□□□ -0.07
SF1-204ENST00000377390 PTPRTO14522 1441 aa14.6□□□□□ -0.07
SF1-204ENST00000377390 CAMK4Q16566 473 aa14.6□□□□□ -0.07
SF1-204ENST00000377390 RTF1Q92541 710 aaKnown RBP14.6□□□□□ -0.07
SF1-204ENST00000377390 NCOA3Q9Y6Q9 1424 aa14.6□□□□□ -0.07
SF1-204ENST00000377390 ANXA1P04083 346 aa14.6□□□□□ -0.07
SF1-204ENST00000377390 C16orf45Q96MC5 204 aaPredicted RBP14.6□□□□□ -0.07
SF1-204ENST00000377390 A0A1W2PP64 1363 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 FCHSD2O94868 740 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 UTP14CQ5TAP6 766 aaKnown RBP14.59□□□□□ -0.07
SF1-204ENST00000377390 PLEKHF1Q96S99 279 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 DCTPP1Q9H773 170 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
SF1-204ENST00000377390 GOLGA6L6A8MZA4 724 aa14.58□□□□□ -0.07
SF1-204ENST00000377390 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.07
SF1-204ENST00000377390 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.07
SF1-204ENST00000377390 PSME1Q06323 249 aa14.58□□□□□ -0.08
SF1-204ENST00000377390 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.08
SF1-204ENST00000377390 KAT6BQ8WYB5 2073 aa14.58□□□□□ -0.08
SF1-204ENST00000377390 PRIMPOLQ96LW4 560 aa14.58□□□□□ -0.08
SF1-204ENST00000377390 SYNMO15061 1565 aa14.57□□□□□ -0.08
SF1-204ENST00000377390 RIOK3O14730 519 aaKnown RBP14.57□□□□□ -0.08
SF1-204ENST00000377390 FERMT3Q86UX7 667 aa14.57□□□□□ -0.08
SF1-204ENST00000377390 IBTKQ9P2D0 1353 aaPredicted RBP14.57□□□□□ -0.08
SF1-204ENST00000377390 ZNF710Q8N1W2 664 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms