RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 CEP85Q6P2H3 762 aa22.44■■□□□ 1.18
SF1-203ENST00000377387 ANKRD44Q8N8A2 993 aa22.44■■□□□ 1.18
SF1-203ENST00000377387 AGLP35573 1532 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 CHL1O00533 1208 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 GAS2L3Q86XJ1 694 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 NECTIN2Q92692 538 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 MSH6P52701 1360 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 TNRQ92752 1358 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 MRE11P49959 708 aa22.43■■□□□ 1.18
SF1-203ENST00000377387 G2E3Q7L622 706 aa22.42■■□□□ 1.18
SF1-203ENST00000377387 CIZ1Q9ULV3 898 aaPredicted RBP22.42■■□□□ 1.18
SF1-203ENST00000377387 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
SF1-203ENST00000377387 SDSP20132 328 aa22.41■■□□□ 1.18
SF1-203ENST00000377387 HDGFP51858 240 aaKnown RBP22.4■■□□□ 1.18
SF1-203ENST00000377387 TSHZ3Q63HK5 1081 aa22.4■■□□□ 1.18
SF1-203ENST00000377387 AK9Q5TCS8 1911 aa22.4■■□□□ 1.18
SF1-203ENST00000377387 TSPYL4Q9UJ04 414 aa22.39■■□□□ 1.18
SF1-203ENST00000377387 KNDC1Q76NI1 1749 aa22.39■■□□□ 1.17
SF1-203ENST00000377387 RPAP2Q8IXW5 612 aaPredicted RBP22.38■■□□□ 1.17
SF1-203ENST00000377387 RTF1Q92541 710 aaKnown RBP22.38■■□□□ 1.17
SF1-203ENST00000377387 USP26Q9BXU7 913 aa22.38■■□□□ 1.17
SF1-203ENST00000377387 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
SF1-203ENST00000377387 NCLP19338 710 aaKnown RBP22.37■■□□□ 1.17
SF1-203ENST00000377387 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
SF1-203ENST00000377387 TMEM2Q9UHN6 1383 aa22.37■■□□□ 1.17
SF1-203ENST00000377387 RTL1A6NKG5 1358 aa22.36■■□□□ 1.17
SF1-203ENST00000377387 PKP1Q13835 747 aa22.36■■□□□ 1.17
SF1-203ENST00000377387 RBM33Q96EV2 1170 aaKnown RBP22.36■■□□□ 1.17
SF1-203ENST00000377387 PLEKHG5O94827 1062 aa22.36■■□□□ 1.17
SF1-203ENST00000377387 EXOC6BQ9Y2D4 811 aa22.36■■□□□ 1.17
SF1-203ENST00000377387 MAP3K19Q56UN5 1328 aa22.36■■□□□ 1.17
SF1-203ENST00000377387 DDX49Q9Y6V7 483 aaKnown RBP22.35■■□□□ 1.17
SF1-203ENST00000377387 ATP10DQ9P241 1426 aa22.35■■□□□ 1.17
SF1-203ENST00000377387 RABEP1Q15276 862 aa22.35■■□□□ 1.17
SF1-203ENST00000377387 RGS12O14924 1447 aa22.35■■□□□ 1.17
SF1-203ENST00000377387 MCTP1Q6DN14 999 aa22.34■■□□□ 1.17
SF1-203ENST00000377387 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
SF1-203ENST00000377387 FOXD4L5Q5VV16 416 aaPredicted RBP22.34■■□□□ 1.17
SF1-203ENST00000377387 FOXD4L4Q8WXT5 416 aaPredicted RBP22.34■■□□□ 1.17
SF1-203ENST00000377387 GOLGA6L22H0YM25 854 aa22.33■■□□□ 1.17
SF1-203ENST00000377387 BAG4O95429 457 aaKnown RBP22.33■■□□□ 1.17
SF1-203ENST00000377387 AMPHP49418 695 aa22.33■■□□□ 1.17
SF1-203ENST00000377387 CASC1Q6TDU7 716 aa22.33■■□□□ 1.17
SF1-203ENST00000377387 REREQ9P2R6 1566 aa22.33■■□□□ 1.17
SF1-203ENST00000377387 KIF13AQ9H1H9 1805 aa22.33■■□□□ 1.16
SF1-203ENST00000377387 ZGPATQ8N5A5 531 aaKnown RBP22.32■■□□□ 1.16
SF1-203ENST00000377387 NGDNQ8NEJ9 315 aaKnown RBP22.32■■□□□ 1.16
SF1-203ENST00000377387 CHAMP1Q96JM3 812 aa22.32■■□□□ 1.16
SF1-203ENST00000377387 PTPRCP08575 1304 aa22.31■■□□□ 1.16
SF1-203ENST00000377387 SKOR2Q2VWA4 1001 aaPredicted RBP22.31■■□□□ 1.16
SF1-203ENST00000377387 LTV1Q96GA3 475 aaPredicted RBP22.31■■□□□ 1.16
SF1-203ENST00000377387 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
SF1-203ENST00000377387 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
SF1-203ENST00000377387 NAP1L5Q96NT1 182 aaPredicted RBP22.3■■□□□ 1.16
SF1-203ENST00000377387 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
SF1-203ENST00000377387 NOL8Q76FK4 1167 aaKnown RBP22.3■■□□□ 1.16
SF1-203ENST00000377387 SIRT1Q96EB6 747 aa22.29■■□□□ 1.16
SF1-203ENST00000377387 HMMRO75330 724 aa22.29■■□□□ 1.16
SF1-203ENST00000377387 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
SF1-203ENST00000377387 TRIM44Q96DX7 344 aaPredicted RBP22.29■■□□□ 1.16
SF1-203ENST00000377387 EYA1Q99502 592 aa22.29■■□□□ 1.16
SF1-203ENST00000377387 MON2Q7Z3U7 1717 aa22.29■■□□□ 1.16
SF1-203ENST00000377387 KIAA0232Q92628 1395 aa22.28■■□□□ 1.16
SF1-203ENST00000377387 PLEKHG3A1L390 1219 aa22.27■■□□□ 1.16
SF1-203ENST00000377387 STK31Q9BXU1 1019 aa22.27■■□□□ 1.16
SF1-203ENST00000377387 C3P01024 1663 aa22.27■■□□□ 1.16
SF1-203ENST00000377387 PTPRUQ92729 1446 aa22.27■■□□□ 1.16
SF1-203ENST00000377387 ITSN1Q15811 1721 aa22.27■■□□□ 1.16
SF1-203ENST00000377387 CRB1P82279 1406 aa22.27■■□□□ 1.15
SF1-203ENST00000377387 PDE1AP54750 535 aa22.27■■□□□ 1.15
SF1-203ENST00000377387 USP6P35125 1406 aa22.26■■□□□ 1.15
SF1-203ENST00000377387 ST18O60284 1047 aa22.26■■□□□ 1.15
SF1-203ENST00000377387 RILPL2Q969X0 211 aa22.26■■□□□ 1.15
SF1-203ENST00000377387 ERBB4Q15303 1308 aa22.26■■□□□ 1.15
SF1-203ENST00000377387 CAVIN1Q6NZI2 390 aaKnown RBP22.25■■□□□ 1.15
SF1-203ENST00000377387 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.25■■□□□ 1.15
SF1-203ENST00000377387 TRIM6-TRIM34B2RNG4 842 aa22.25■■□□□ 1.15
SF1-203ENST00000377387 ERC2O15083 957 aa22.25■■□□□ 1.15
SF1-203ENST00000377387 REC8O95072 547 aa22.25■■□□□ 1.15
SF1-203ENST00000377387 OVOS2A0A0J9YW53 1432 aa22.25■■□□□ 1.15
SF1-203ENST00000377387 OVOS2Q6IE36 1432 aa22.25■■□□□ 1.15
SF1-203ENST00000377387 GNAI2P04899 355 aa22.24■■□□□ 1.15
SF1-203ENST00000377387 NLRP6P59044 892 aa22.24■■□□□ 1.15
SF1-203ENST00000377387 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
SF1-203ENST00000377387 PNMA6EA0A0J9YXQ4 647 aa22.24■■□□□ 1.15
SF1-203ENST00000377387 TECPR2O15040 1411 aa22.24■■□□□ 1.15
SF1-203ENST00000377387 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
SF1-203ENST00000377387 NEK4P51957 841 aa22.24■■□□□ 1.15
SF1-203ENST00000377387 EID1Q9Y6B2 187 aa22.23■■□□□ 1.15
SF1-203ENST00000377387 AKAP12Q02952 1782 aa22.23■■□□□ 1.15
SF1-203ENST00000377387 ESPNB1AK53 854 aa22.23■■□□□ 1.15
SF1-203ENST00000377387 PRPF40AO75400 957 aaKnown RBP22.23■■□□□ 1.15
SF1-203ENST00000377387 NUCB2P80303 420 aa22.22■■□□□ 1.15
SF1-203ENST00000377387 FLIIQ13045 1269 aa22.22■■□□□ 1.15
SF1-203ENST00000377387 RIMS1Q86UR5 1692 aaKnown RBP22.22■■□□□ 1.15
SF1-203ENST00000377387 UBR1Q8IWV7 1749 aa22.21■■□□□ 1.15
SF1-203ENST00000377387 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
SF1-203ENST00000377387 PTMSP20962 102 aa22.21■■□□□ 1.15
SF1-203ENST00000377387 CLCN1P35523 988 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms