RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-203ENST00000376619 FLIIQ13045 1269 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.238e-6■□□□□ 9
HDAC6-203ENST00000376619 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 KDM5DQ9BY66 1539 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 TOMM22Q9NS69 142 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 METP08581 1390 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-203ENST00000376619 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 DNAJC2Q99543 621 aaKnown RBP13.61□□□□□ -0.23
HDAC6-203ENST00000376619 PHAXQ9H814 394 aaKnown RBP13.61□□□□□ -0.23
HDAC6-203ENST00000376619 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-203ENST00000376619 FRMPD1Q5SYB0 1578 aa13.6□□□□□ -0.23
HDAC6-203ENST00000376619 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
HDAC6-203ENST00000376619 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
HDAC6-203ENST00000376619 NUTM2BA6NNL0 878 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-203ENST00000376619 NUTM2EB1AL46 878 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-203ENST00000376619 TOM1O60784 492 aa13.6□□□□□ -0.23
HDAC6-203ENST00000376619 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-203ENST00000376619 NUTM2AQ8IVF1 878 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-203ENST00000376619 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
HDAC6-203ENST00000376619 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
HDAC6-203ENST00000376619 GNAI3P08754 354 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 IL13P35225 146 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 PRDM11Q9NQV5 511 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
HDAC6-203ENST00000376619 L1TD1Q5T7N2 865 aaKnown RBP13.58□□□□□ -0.23
HDAC6-203ENST00000376619 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.23
HDAC6-203ENST00000376619 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-203ENST00000376619 ADGBQ8N7X0 1667 aa13.58□□□□□ -0.24
HDAC6-203ENST00000376619 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
HDAC6-203ENST00000376619 STK3Q13188 491 aa13.58□□□□□ -0.24
HDAC6-203ENST00000376619 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
HDAC6-203ENST00000376619 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
HDAC6-203ENST00000376619 ABCC3O15438 1527 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-203ENST00000376619 ALDH1L2Q3SY69 923 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 GDPD2Q9HCC8 539 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 CHPF2Q9P2E5 772 aa13.57□□□□□ -0.24
HDAC6-203ENST00000376619 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-203ENST00000376619 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
HDAC6-203ENST00000376619 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
HDAC6-203ENST00000376619 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-203ENST00000376619 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
HDAC6-203ENST00000376619 TBC1D32Q96NH3 1257 aa13.56□□□□□ -0.24
HDAC6-203ENST00000376619 PA2G4Q9UQ80 394 aaKnown RBP13.56□□□□□ -0.24
HDAC6-203ENST00000376619 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
HDAC6-203ENST00000376619 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
HDAC6-203ENST00000376619 SSFA2P28290 1259 aa13.55□□□□□ -0.24
HDAC6-203ENST00000376619 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-203ENST00000376619 KCNQ3O43525 872 aa13.55□□□□□ -0.24
HDAC6-203ENST00000376619 MCM4P33991 863 aa13.55□□□□□ -0.24
HDAC6-203ENST00000376619 BOLA2Q9H3K6 86 aa13.55□□□□□ -0.24
HDAC6-203ENST00000376619 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
HDAC6-203ENST00000376619 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
HDAC6-203ENST00000376619 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
HDAC6-203ENST00000376619 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
HDAC6-203ENST00000376619 AACSQ86V21 672 aa13.54□□□□□ -0.24
HDAC6-203ENST00000376619 BLMP54132 1417 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-203ENST00000376619 SDSP20132 328 aa13.54□□□□□ -0.24
HDAC6-203ENST00000376619 CEBPZQ03701 1054 aaKnown RBP13.54□□□□□ -0.24
HDAC6-203ENST00000376619 PHF23Q9BUL5 403 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-203ENST00000376619 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
HDAC6-203ENST00000376619 APPP05067 770 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 CABP4P57796 275 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 NUCB1Q02818 461 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 AGLP35573 1532 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-203ENST00000376619 CHAMP1Q96JM3 812 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 FER1L4A9Z1Z3 1794 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 RPAP2Q8IXW5 612 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-203ENST00000376619 PLEKHF1Q96S99 279 aa13.53□□□□□ -0.24
HDAC6-203ENST00000376619 DDX11L8A8MPP1 907 aa13.52□□□□□ -0.24
HDAC6-203ENST00000376619 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.24
HDAC6-203ENST00000376619 FERMT3Q86UX7 667 aa13.52□□□□□ -0.24
HDAC6-203ENST00000376619 DRC7Q8IY82 874 aa13.52□□□□□ -0.24
HDAC6-203ENST00000376619 KLHDC4Q8TBB5 520 aa13.52□□□□□ -0.24
HDAC6-203ENST00000376619 ANKRD24Q8TF21 1146 aa13.52□□□□□ -0.24
HDAC6-203ENST00000376619 AAMPQ13685 434 aa13.52□□□□□ -0.25
HDAC6-203ENST00000376619 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
HDAC6-203ENST00000376619 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
HDAC6-203ENST00000376619 ERC2O15083 957 aa13.52□□□□□ -0.25
HDAC6-203ENST00000376619 FIBPO43427 364 aa13.52□□□□□ -0.25
HDAC6-203ENST00000376619 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.25
HDAC6-203ENST00000376619 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-203ENST00000376619 MX1P20591 662 aa13.51□□□□□ -0.25
HDAC6-203ENST00000376619 MYD88Q99836 296 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms