RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 DDX19BQ9UMR2 479 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 UNC13BO14795 1591 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 HSPA1LP34931 641 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 PTPRUQ92729 1446 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
DDR1-225ENST00000376568 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
DDR1-225ENST00000376568 HMMRO75330 724 aa16.87■□□□□ 0.29
DDR1-225ENST00000376568 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
DDR1-225ENST00000376568 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
DDR1-225ENST00000376568 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
DDR1-225ENST00000376568 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
DDR1-225ENST00000376568 PHAXQ9H814 394 aaKnown RBP16.87■□□□□ 0.29
DDR1-225ENST00000376568 ARHGEF25Q86VW2 580 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 FGD1P98174 961 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 SPHKAPQ2M3C7 1700 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 CAMSAP1Q5T5Y3 1602 aa16.86■□□□□ 0.29
DDR1-225ENST00000376568 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 ADGRL3Q9HAR2 1447 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 A1BGP04217 495 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 G2E3Q7L622 706 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 PIK3C2BO00750 1634 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
DDR1-225ENST00000376568 TRIM27P14373 513 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
DDR1-225ENST00000376568 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
DDR1-225ENST00000376568 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
DDR1-225ENST00000376568 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
DDR1-225ENST00000376568 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
DDR1-225ENST00000376568 NSD2O96028 1365 aa16.84■□□□□ 0.29
DDR1-225ENST00000376568 SIRT1Q96EB6 747 aa16.84■□□□□ 0.29
DDR1-225ENST00000376568 SBNO2Q9Y2G9 1366 aa16.84■□□□□ 0.29
DDR1-225ENST00000376568 SMARCA5O60264 1052 aaPredicted RBP16.83■□□□□ 0.29
DDR1-225ENST00000376568 IL17REQ8NFR9 667 aa16.83■□□□□ 0.29
DDR1-225ENST00000376568 MYOM2P54296 1465 aa16.83■□□□□ 0.29
DDR1-225ENST00000376568 PUS7Q96PZ0 661 aaKnown RBP16.83■□□□□ 0.28
DDR1-225ENST00000376568 FLIIQ13045 1269 aa16.83■□□□□ 0.28
DDR1-225ENST00000376568 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
DDR1-225ENST00000376568 IFT57Q9NWB7 429 aa16.83■□□□□ 0.28
DDR1-225ENST00000376568 STARD3NLO95772 234 aa16.82■□□□□ 0.28
DDR1-225ENST00000376568 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
DDR1-225ENST00000376568 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
DDR1-225ENST00000376568 USP6P35125 1406 aa16.82■□□□□ 0.28
DDR1-225ENST00000376568 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
DDR1-225ENST00000376568 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDR1-225ENST00000376568 RLBP1P12271 317 aa16.81■□□□□ 0.28
DDR1-225ENST00000376568 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
DDR1-225ENST00000376568 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
DDR1-225ENST00000376568 TSHZ3Q63HK5 1081 aa16.81■□□□□ 0.28
DDR1-225ENST00000376568 SYNMO15061 1565 aa16.81■□□□□ 0.28
DDR1-225ENST00000376568 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
DDR1-225ENST00000376568 ZNF496Q96IT1 587 aaPredicted RBP16.81■□□□□ 0.28
DDR1-225ENST00000376568 MAP3K2Q9Y2U5 619 aa16.81■□□□□ 0.28
DDR1-225ENST00000376568 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
DDR1-225ENST00000376568 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
DDR1-225ENST00000376568 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
DDR1-225ENST00000376568 TMX4Q9H1E5 349 aaPredicted RBP16.8■□□□□ 0.28
DDR1-225ENST00000376568 POLR3AO14802 1390 aaPredicted RBP16.8■□□□□ 0.28
DDR1-225ENST00000376568 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
DDR1-225ENST00000376568 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
DDR1-225ENST00000376568 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
DDR1-225ENST00000376568 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
DDR1-225ENST00000376568 ASAP1Q9ULH1 1129 aa16.79■□□□□ 0.28
DDR1-225ENST00000376568 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
DDR1-225ENST00000376568 ADGRB3O60242 1522 aa16.79■□□□□ 0.28
DDR1-225ENST00000376568 VPS37DQ86XT2 251 aa16.78■□□□□ 0.28
DDR1-225ENST00000376568 DNAJC10Q8IXB1 793 aa16.78■□□□□ 0.28
DDR1-225ENST00000376568 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
DDR1-225ENST00000376568 A0A087WZG4 1122 aa16.78■□□□□ 0.28
DDR1-225ENST00000376568 IFIT2P09913 472 aaKnown RBP16.78■□□□□ 0.28
DDR1-225ENST00000376568 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
DDR1-225ENST00000376568 AGLP35573 1532 aa16.78■□□□□ 0.28
DDR1-225ENST00000376568 MEIS3Q99687 375 aa16.77■□□□□ 0.28
DDR1-225ENST00000376568 TRIM37O94972 964 aa16.77■□□□□ 0.27
DDR1-225ENST00000376568 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.27
DDR1-225ENST00000376568 RICTORQ6R327 1708 aa16.77■□□□□ 0.27
DDR1-225ENST00000376568 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
DDR1-225ENST00000376568 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
DDR1-225ENST00000376568 ZPR1O75312 459 aa16.76■□□□□ 0.27
DDR1-225ENST00000376568 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
DDR1-225ENST00000376568 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
DDR1-225ENST00000376568 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
DDR1-225ENST00000376568 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
DDR1-225ENST00000376568 PDZRN3Q9UPQ7 1066 aa16.75■□□□□ 0.27
DDR1-225ENST00000376568 ERBB3P21860 1342 aa16.75■□□□□ 0.27
DDR1-225ENST00000376568 VAMP4O75379 141 aa16.75■□□□□ 0.27
DDR1-225ENST00000376568 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
DDR1-225ENST00000376568 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
DDR1-225ENST00000376568 GNAI2P04899 355 aa16.74■□□□□ 0.27
DDR1-225ENST00000376568 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
DDR1-225ENST00000376568 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
DDR1-225ENST00000376568 NEXMIFQ5QGS0 1516 aa16.74■□□□□ 0.27
DDR1-225ENST00000376568 AK7Q96M32 723 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms