RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CD163L1Q9NR16 1453 aa14.15□□□□□ -0.14
TM9SF2-201ENST00000376387 PIK3R4Q99570 1358 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 APBB1O00213 710 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 BRPF1P55201 1214 aaPredicted RBP14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 PDLIM2Q96JY6 352 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 MBIPQ9NS73 344 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 PUS7Q96PZ0 661 aaKnown RBP14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 TMEM63CQ9P1W3 806 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
TM9SF2-201ENST00000376387 SMARCA5O60264 1052 aaPredicted RBP14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 NUCB2P80303 420 aa14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 NEO1Q92859 1461 aa14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 SYCE3A1L190 88 aa14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 PNPLA6Q8IY17 1366 aa14.13□□□□□ -0.15
TM9SF2-201ENST00000376387 FCHSD2O94868 740 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 UQCRHLA0A096LP55 91 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 UQCRHP07919 91 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 ARHGAP45Q92619 1136 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 FAM135BQ49AJ0 1406 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 ZNF500O60304 480 aaPredicted RBP14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 RNF214Q8ND24 703 aa14.12□□□□□ -0.15
TM9SF2-201ENST00000376387 SOX12O15370 315 aa14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 POGZQ7Z3K3 1410 aa14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 ANKRD26Q9UPS8 1709 aa14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 FAM83GA6ND36 823 aa14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 SDSP20132 328 aa14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 TWISTNBQ3B726 338 aaPredicted RBP14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 SIGLEC1Q9BZZ2 1709 aa14.11□□□□□ -0.15
TM9SF2-201ENST00000376387 RPGRIP1LQ68CZ1 1315 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 NFE2L2Q16236 605 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 DCTPP1Q9H773 170 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 CABP1Q9NZU7 370 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 ZKSCAN5Q9Y2L8 839 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
TM9SF2-201ENST00000376387 JARID2Q92833 1246 aaPredicted RBP14.09□□□□□ -0.15
TM9SF2-201ENST00000376387 TERF2IPQ9NYB0 399 aa14.09□□□□□ -0.15
TM9SF2-201ENST00000376387 HS1BP3Q53T59 392 aa14.09□□□□□ -0.15
TM9SF2-201ENST00000376387 MPNDQ8N594 471 aa14.09□□□□□ -0.15
TM9SF2-201ENST00000376387 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
TM9SF2-201ENST00000376387 ZNF428Q96B54 188 aa14.09□□□□□ -0.15
TM9SF2-201ENST00000376387 TERF1P54274 439 aa14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 PRDM4Q9UKN5 801 aa14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 MLH3Q9UHC1 1453 aa14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 ZNF853P0CG23 659 aa14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 INTS3Q68E01 1043 aaKnown RBP14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
TM9SF2-201ENST00000376387 EMILIN1Q9Y6C2 1016 aa14.07□□□□□ -0.16
TM9SF2-201ENST00000376387 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
TM9SF2-201ENST00000376387 GNAI1P63096 354 aa14.07□□□□□ -0.16
TM9SF2-201ENST00000376387 IFT57Q9NWB7 429 aa14.07□□□□□ -0.16
TM9SF2-201ENST00000376387 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
TM9SF2-201ENST00000376387 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 CWC22Q9HCG8 908 aaKnown RBP14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 ABCC3O15438 1527 aa14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 PTPRMP28827 1452 aa14.06□□□□□ -0.16
TM9SF2-201ENST00000376387 ST18O60284 1047 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 ZNF830Q96NB3 372 aaPredicted RBP14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 ATP10DQ9P241 1426 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 IDI1Q13907 227 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
TM9SF2-201ENST00000376387 CEP85Q6P2H3 762 aa14.04□□□□□ -0.16
TM9SF2-201ENST00000376387 ANKRD44Q8N8A2 993 aa14.04□□□□□ -0.16
TM9SF2-201ENST00000376387 TSC1Q92574 1164 aa14.04□□□□□ -0.16
TM9SF2-201ENST00000376387 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 GDPD2Q9HCC8 539 aa14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 IL13P35225 146 aa14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 NEK4P51957 841 aa14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 TMX3Q96JJ7 454 aa14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 PIK3C2BO00750 1634 aa14.03□□□□□ -0.16
TM9SF2-201ENST00000376387 MYO5BQ9ULV0 1848 aa14.02□□□□□ -0.16
TM9SF2-201ENST00000376387 MEIS3Q99687 375 aa14.02□□□□□ -0.16
TM9SF2-201ENST00000376387 CCDC39Q9UFE4 941 aa14.02□□□□□ -0.16
TM9SF2-201ENST00000376387 ZFYVE9O95405 1425 aa14.02□□□□□ -0.16
TM9SF2-201ENST00000376387 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.17
TM9SF2-201ENST00000376387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
TM9SF2-201ENST00000376387 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.17
TM9SF2-201ENST00000376387 MSH6P52701 1360 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms