RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 GLI2P10070 1586 aa12.95□□□□□ -0.34
ZNF549-202ENST00000376233 ANXA1P04083 346 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 UPF3BQ9BZI7 483 aaKnown RBP12.94□□□□□ -0.34
ZNF549-202ENST00000376233 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 TULP4Q9NRJ4 1543 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 FLIIQ13045 1269 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
ZNF549-202ENST00000376233 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
ZNF549-202ENST00000376233 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
ZNF549-202ENST00000376233 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
ZNF549-202ENST00000376233 RNF214Q8ND24 703 aa12.93□□□□□ -0.34
ZNF549-202ENST00000376233 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
ZNF549-202ENST00000376233 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
ZNF549-202ENST00000376233 EDC4Q6P2E9 1401 aaKnown RBP12.93□□□□□ -0.34
ZNF549-202ENST00000376233 CEP85Q6P2H3 762 aa12.93□□□□□ -0.34
ZNF549-202ENST00000376233 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
ZNF549-202ENST00000376233 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
ZNF549-202ENST00000376233 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
ZNF549-202ENST00000376233 NASPP49321 788 aaPredicted RBP12.92□□□□□ -0.34
ZNF549-202ENST00000376233 NCBP3Q53F19 620 aaKnown RBP12.92□□□□□ -0.34
ZNF549-202ENST00000376233 EYA1Q99502 592 aa12.92□□□□□ -0.34
ZNF549-202ENST00000376233 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
ZNF549-202ENST00000376233 SRCIN1Q9C0H9 1055 aa12.92□□□□□ -0.34
ZNF549-202ENST00000376233 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
ZNF549-202ENST00000376233 PTPRCP08575 1304 aa12.91□□□□□ -0.34
ZNF549-202ENST00000376233 MX1P20591 662 aa12.91□□□□□ -0.34
ZNF549-202ENST00000376233 LTKP29376 864 aa12.91□□□□□ -0.34
ZNF549-202ENST00000376233 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
ZNF549-202ENST00000376233 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
ZNF549-202ENST00000376233 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
ZNF549-202ENST00000376233 MSH6P52701 1360 aa12.9□□□□□ -0.34
ZNF549-202ENST00000376233 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
ZNF549-202ENST00000376233 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.35
ZNF549-202ENST00000376233 CHL1O00533 1208 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
ZNF549-202ENST00000376233 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
ZNF549-202ENST00000376233 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 GOLGA6L4A6NEF3 574 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 ARID3AQ99856 593 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
ZNF549-202ENST00000376233 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
ZNF549-202ENST00000376233 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
ZNF549-202ENST00000376233 DDX54Q8TDD1 881 aaKnown RBP12.88□□□□□ -0.35
ZNF549-202ENST00000376233 SNX21Q969T3 373 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 SIL1Q9H173 461 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 ABCC4O15439 1325 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 PDE1AP54750 535 aa12.88□□□□□ -0.35
ZNF549-202ENST00000376233 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
ZNF549-202ENST00000376233 CLASRPQ8N2M8 674 aaKnown RBP12.88□□□□□ -0.35
ZNF549-202ENST00000376233 BTBD11A6QL63 1104 aa12.87□□□□□ -0.35
ZNF549-202ENST00000376233 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
ZNF549-202ENST00000376233 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
ZNF549-202ENST00000376233 VWDEQ8N2E2 1590 aa12.87□□□□□ -0.35
ZNF549-202ENST00000376233 MPNDQ8N594 471 aa12.87□□□□□ -0.35
ZNF549-202ENST00000376233 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
ZNF549-202ENST00000376233 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
ZNF549-202ENST00000376233 RIC3Q7Z5B4 369 aa12.87□□□□□ -0.35
ZNF549-202ENST00000376233 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
ZNF549-202ENST00000376233 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
ZNF549-202ENST00000376233 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
ZNF549-202ENST00000376233 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
ZNF549-202ENST00000376233 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
ZNF549-202ENST00000376233 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
ZNF549-202ENST00000376233 KCNA6P17658 529 aa12.86□□□□□ -0.35
ZNF549-202ENST00000376233 ARHGAP31Q2M1Z3 1444 aa12.86□□□□□ -0.35
ZNF549-202ENST00000376233 MYL6BP14649 208 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
ZNF549-202ENST00000376233 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 MROH1Q8NDA8 1641 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 MYOM1P52179 1685 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 ZNF853P0CG23 659 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 FAM135BQ49AJ0 1406 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
ZNF549-202ENST00000376233 KIAA1210Q9ULL0 1709 aa12.84□□□□□ -0.35
ZNF549-202ENST00000376233 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
ZNF549-202ENST00000376233 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
ZNF549-202ENST00000376233 CWC22Q9HCG8 908 aaKnown RBP12.84□□□□□ -0.35
ZNF549-202ENST00000376233 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
ZNF549-202ENST00000376233 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
ZNF549-202ENST00000376233 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
ZNF549-202ENST00000376233 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
ZNF549-202ENST00000376233 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms