RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 LARP1Q6PKG0 1096 aaKnown RBP16.25■□□□□ 0.19
C9orf47-203ENST00000375851 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
C9orf47-203ENST00000375851 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
C9orf47-203ENST00000375851 NAT10Q9H0A0 1025 aaKnown RBP16.24■□□□□ 0.19
C9orf47-203ENST00000375851 CEBPZQ03701 1054 aaKnown RBP16.24■□□□□ 0.19
C9orf47-203ENST00000375851 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
C9orf47-203ENST00000375851 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
C9orf47-203ENST00000375851 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
C9orf47-203ENST00000375851 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
C9orf47-203ENST00000375851 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
C9orf47-203ENST00000375851 ANKRD36BQ8N2N9 1353 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
C9orf47-203ENST00000375851 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
C9orf47-203ENST00000375851 STK38Q15208 465 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 LARP1BQ659C4 914 aaKnown RBP16.23■□□□□ 0.19
C9orf47-203ENST00000375851 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 AEBP1Q8IUX7 1158 aa16.23■□□□□ 0.19
C9orf47-203ENST00000375851 A2MP01023 1474 aa16.22■□□□□ 0.19
C9orf47-203ENST00000375851 STARD3NLO95772 234 aa16.22■□□□□ 0.19
C9orf47-203ENST00000375851 SLC3A2P08195 630 aaKnown RBP16.22■□□□□ 0.19
C9orf47-203ENST00000375851 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
C9orf47-203ENST00000375851 A0A0U1RQG5 324 aaPredicted RBP16.22■□□□□ 0.19
C9orf47-203ENST00000375851 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
C9orf47-203ENST00000375851 RAB11FIP3O75154 756 aa16.22■□□□□ 0.19
C9orf47-203ENST00000375851 FLIIQ13045 1269 aa16.22■□□□□ 0.19
C9orf47-203ENST00000375851 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
C9orf47-203ENST00000375851 MCM4P33991 863 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 TRIM5Q9C035 493 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 PDRG1Q9NUG6 133 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.21■□□□□ 0.19
C9orf47-203ENST00000375851 TESK2Q96S53 571 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
C9orf47-203ENST00000375851 TSPY26PQ9H489 355 aa16.21■□□□□ 0.19
C9orf47-203ENST00000375851 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
C9orf47-203ENST00000375851 KRT85P78386 507 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 LRRFIP2Q9Y608 721 aaKnown RBP16.2■□□□□ 0.18
C9orf47-203ENST00000375851 NUP160Q12769 1436 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 UPF3BQ9BZI7 483 aaKnown RBP16.2■□□□□ 0.18
C9orf47-203ENST00000375851 IL16Q14005 1332 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 TNRQ92752 1358 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 STK11IPQ8N1F8 1099 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 MYD88Q99836 296 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 CCDC39Q9UFE4 941 aa16.2■□□□□ 0.18
C9orf47-203ENST00000375851 KRT32Q14532 448 aa16.19■□□□□ 0.18
C9orf47-203ENST00000375851 ZSCAN31Q96LW9 406 aaPredicted RBP16.19■□□□□ 0.18
C9orf47-203ENST00000375851 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
C9orf47-203ENST00000375851 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
C9orf47-203ENST00000375851 PTPRCP08575 1304 aa16.19■□□□□ 0.18
C9orf47-203ENST00000375851 KRT28Q7Z3Y7 464 aa16.19■□□□□ 0.18
C9orf47-203ENST00000375851 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
C9orf47-203ENST00000375851 TRIM22Q8IYM9 498 aa16.18■□□□□ 0.18
C9orf47-203ENST00000375851 ITSN2Q9NZM3 1697 aa16.18■□□□□ 0.18
C9orf47-203ENST00000375851 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
C9orf47-203ENST00000375851 BOLA2Q9H3K6 86 aa16.18■□□□□ 0.18
C9orf47-203ENST00000375851 PIP4K2BP78356 416 aa16.18■□□□□ 0.18
C9orf47-203ENST00000375851 CCDC43Q96MW1 224 aaKnown RBP16.18■□□□□ 0.18
C9orf47-203ENST00000375851 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
C9orf47-203ENST00000375851 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 PARD3Q8TEW0 1356 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 IGHDP01880 384 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 KIAA0556O60303 1618 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 ME1P48163 572 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
C9orf47-203ENST00000375851 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
C9orf47-203ENST00000375851 CCDC70Q6NSX1 233 aa16.16■□□□□ 0.18
C9orf47-203ENST00000375851 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
C9orf47-203ENST00000375851 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
C9orf47-203ENST00000375851 ASXL1Q8IXJ9 1541 aa16.16■□□□□ 0.18
C9orf47-203ENST00000375851 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
C9orf47-203ENST00000375851 WDR62O43379 1518 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 CTTNBP2Q8WZ74 1663 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 UHRF1BP1LA0JNW5 1464 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
C9orf47-203ENST00000375851 CCDC69A6NI79 296 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
C9orf47-203ENST00000375851 PDILTQ8N807 584 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 NUP133Q8WUM0 1156 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
C9orf47-203ENST00000375851 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
C9orf47-203ENST00000375851 TDO2P48775 406 aa16.14■□□□□ 0.17
C9orf47-203ENST00000375851 CCDC192P0DO97 292 aa16.14■□□□□ 0.17
C9orf47-203ENST00000375851 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
C9orf47-203ENST00000375851 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
C9orf47-203ENST00000375851 A0A087WZG4 1122 aa16.14■□□□□ 0.17
C9orf47-203ENST00000375851 TNMDQ9H2S6 317 aa16.14■□□□□ 0.17
C9orf47-203ENST00000375851 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
C9orf47-203ENST00000375851 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
C9orf47-203ENST00000375851 AKAP2Q9Y2D5 859 aa16.13■□□□□ 0.17
C9orf47-203ENST00000375851 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms