RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.17
CLIC1-207ENST00000375780 ZCRB1Q8TBF4 217 aaKnown RBP16.14■□□□□ 0.17
CLIC1-207ENST00000375780 BAG6P46379 1132 aa16.13■□□□□ 0.17
CLIC1-207ENST00000375780 NHSQ6T4R5 1651 aa16.13■□□□□ 0.17
CLIC1-207ENST00000375780 TRIM37O94972 964 aa16.13■□□□□ 0.17
CLIC1-207ENST00000375780 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
CLIC1-207ENST00000375780 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
CLIC1-207ENST00000375780 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
CLIC1-207ENST00000375780 IL13P35225 146 aa16.11■□□□□ 0.17
CLIC1-207ENST00000375780 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
CLIC1-207ENST00000375780 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
CLIC1-207ENST00000375780 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
CLIC1-207ENST00000375780 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
CLIC1-207ENST00000375780 DDX54Q8TDD1 881 aaKnown RBP16.1■□□□□ 0.17
CLIC1-207ENST00000375780 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
CLIC1-207ENST00000375780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLIC1-207ENST00000375780 DOT1LQ8TEK3 1739 aa16.1■□□□□ 0.17
CLIC1-207ENST00000375780 KDRP35968 1356 aa16.09■□□□□ 0.17
CLIC1-207ENST00000375780 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
CLIC1-207ENST00000375780 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
CLIC1-207ENST00000375780 DEFB132Q7Z7B7 95 aa16.09■□□□□ 0.17
CLIC1-207ENST00000375780 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
CLIC1-207ENST00000375780 APBA3O96018 575 aa16.08■□□□□ 0.16
CLIC1-207ENST00000375780 BTAF1O14981 1849 aa16.07■□□□□ 0.16
CLIC1-207ENST00000375780 RALBP1Q15311 655 aa16.07■□□□□ 0.16
CLIC1-207ENST00000375780 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
CLIC1-207ENST00000375780 RREB1Q92766 1687 aa16.06■□□□□ 0.16
CLIC1-207ENST00000375780 CYP27B1O15528 508 aa16.04■□□□□ 0.16
CLIC1-207ENST00000375780 EN1Q05925 392 aaPredicted RBP16.04■□□□□ 0.16
CLIC1-207ENST00000375780 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
CLIC1-207ENST00000375780 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
CLIC1-207ENST00000375780 PLEKHO1Q53GL0 409 aaPredicted RBP16.04■□□□□ 0.16
CLIC1-207ENST00000375780 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
CLIC1-207ENST00000375780 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
CLIC1-207ENST00000375780 ITGB4P16144 1822 aa16.03■□□□□ 0.16
CLIC1-207ENST00000375780 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
CLIC1-207ENST00000375780 PLSCR1O15162 318 aa16.03■□□□□ 0.16
CLIC1-207ENST00000375780 CAMKK2Q96RR4 588 aa16.03■□□□□ 0.16
CLIC1-207ENST00000375780 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
CLIC1-207ENST00000375780 KCNQ2O43526 872 aa16.02■□□□□ 0.16
CLIC1-207ENST00000375780 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.16
CLIC1-207ENST00000375780 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.15
CLIC1-207ENST00000375780 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
CLIC1-207ENST00000375780 EZH2Q15910 746 aaKnown RBP16.01■□□□□ 0.15
CLIC1-207ENST00000375780 HSP90AB1P08238 724 aaKnown RBP16■□□□□ 0.15
CLIC1-207ENST00000375780 HMOX1P09601 288 aa16■□□□□ 0.15
CLIC1-207ENST00000375780 PHKG2P15735 406 aa16■□□□□ 0.15
CLIC1-207ENST00000375780 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
CLIC1-207ENST00000375780 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
CLIC1-207ENST00000375780 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
CLIC1-207ENST00000375780 ZNF530Q6P9A1 599 aaPredicted RBP16■□□□□ 0.15
CLIC1-207ENST00000375780 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
CLIC1-207ENST00000375780 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
CLIC1-207ENST00000375780 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
CLIC1-207ENST00000375780 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
CLIC1-207ENST00000375780 LY75O60449 1722 aa15.98■□□□□ 0.15
CLIC1-207ENST00000375780 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
CLIC1-207ENST00000375780 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
CLIC1-207ENST00000375780 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLIC1-207ENST00000375780 DCAF5Q96JK2 942 aa15.96■□□□□ 0.15
CLIC1-207ENST00000375780 TXNRD1Q16881 649 aa15.95■□□□□ 0.14
CLIC1-207ENST00000375780 FCHSD2O94868 740 aa15.94■□□□□ 0.14
CLIC1-207ENST00000375780 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
CLIC1-207ENST00000375780 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
CLIC1-207ENST00000375780 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
CLIC1-207ENST00000375780 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 MPRIPQ6WCQ1 1025 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 MIER1Q8N108 512 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 GAS2L2Q8NHY3 880 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
CLIC1-207ENST00000375780 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
CLIC1-207ENST00000375780 SLC27A3Q5K4L6 730 aa15.92■□□□□ 0.14
CLIC1-207ENST00000375780 PROM2Q8N271 834 aa15.92■□□□□ 0.14
CLIC1-207ENST00000375780 SMARCC1Q92922 1105 aaPredicted RBP15.92■□□□□ 0.14
CLIC1-207ENST00000375780 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
CLIC1-207ENST00000375780 NEFMP07197 916 aa15.91■□□□□ 0.14
CLIC1-207ENST00000375780 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
CLIC1-207ENST00000375780 PIGBQ92521 554 aa15.9■□□□□ 0.14
CLIC1-207ENST00000375780 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
CLIC1-207ENST00000375780 PALLDQ8WX93 1383 aa15.9■□□□□ 0.14
CLIC1-207ENST00000375780 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
CLIC1-207ENST00000375780 MRC1P22897 1456 aa15.89■□□□□ 0.13
CLIC1-207ENST00000375780 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
CLIC1-207ENST00000375780 CABP4P57796 275 aa15.89■□□□□ 0.13
CLIC1-207ENST00000375780 C5P01031 1676 aa15.88■□□□□ 0.13
CLIC1-207ENST00000375780 DLG5Q8TDM6 1919 aa15.88■□□□□ 0.13
CLIC1-207ENST00000375780 ANP32CO43423 234 aa15.87■□□□□ 0.13
CLIC1-207ENST00000375780 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
CLIC1-207ENST00000375780 ZNF831Q5JPB2 1677 aa15.87■□□□□ 0.13
CLIC1-207ENST00000375780 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
CLIC1-207ENST00000375780 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
CLIC1-207ENST00000375780 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
CLIC1-207ENST00000375780 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
CLIC1-207ENST00000375780 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
CLIC1-207ENST00000375780 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
CLIC1-207ENST00000375780 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
CLIC1-207ENST00000375780 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms