RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 RAPGEF4Q8WZA2 1011 aa21.68■■□□□ 1.06
C11orf88-202ENST00000375618 TATP17735 454 aaPredicted RBP21.67■■□□□ 1.06
C11orf88-202ENST00000375618 SF3B2Q13435 895 aaKnown RBP21.67■■□□□ 1.06
C11orf88-202ENST00000375618 PKD1L3Q7Z443 1732 aa21.66■■□□□ 1.06
C11orf88-202ENST00000375618 KCNQ2O43526 872 aa21.66■■□□□ 1.06
C11orf88-202ENST00000375618 EN1Q05925 392 aaPredicted RBP21.66■■□□□ 1.06
C11orf88-202ENST00000375618 AEBP1Q8IUX7 1158 aa21.66■■□□□ 1.06
C11orf88-202ENST00000375618 PPP2R1AP30153 589 aa21.65■■□□□ 1.06
C11orf88-202ENST00000375618 ACSBG1Q96GR2 724 aa21.65■■□□□ 1.06
C11orf88-202ENST00000375618 PARD3Q8TEW0 1356 aa21.64■■□□□ 1.06
C11orf88-202ENST00000375618 APBA3O96018 575 aa21.64■■□□□ 1.05
C11orf88-202ENST00000375618 NHSQ6T4R5 1651 aa21.63■■□□□ 1.05
C11orf88-202ENST00000375618 CYP27B1O15528 508 aa21.63■■□□□ 1.05
C11orf88-202ENST00000375618 BAG6P46379 1132 aa21.63■■□□□ 1.05
C11orf88-202ENST00000375618 EZH2Q15910 746 aaKnown RBP21.62■■□□□ 1.05
C11orf88-202ENST00000375618 CAMKK2Q96RR4 588 aa21.62■■□□□ 1.05
C11orf88-202ENST00000375618 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
C11orf88-202ENST00000375618 DOT1LQ8TEK3 1739 aa21.6■■□□□ 1.05
C11orf88-202ENST00000375618 SULT6B1Q6IMI4 303 aa21.6■■□□□ 1.05
C11orf88-202ENST00000375618 KDRP35968 1356 aa21.6■■□□□ 1.05
C11orf88-202ENST00000375618 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
C11orf88-202ENST00000375618 PCDH11XQ9BZA7 1347 aa21.58■■□□□ 1.05
C11orf88-202ENST00000375618 PCDH11YQ9BZA8 1340 aa21.58■■□□□ 1.05
C11orf88-202ENST00000375618 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.04
C11orf88-202ENST00000375618 RREB1Q92766 1687 aa21.56■■□□□ 1.04
C11orf88-202ENST00000375618 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
C11orf88-202ENST00000375618 HMOX1P09601 288 aa21.56■■□□□ 1.04
C11orf88-202ENST00000375618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.56■■□□□ 1.04
C11orf88-202ENST00000375618 BTAF1O14981 1849 aa21.56■■□□□ 1.04
C11orf88-202ENST00000375618 PRIM1P49642 420 aaKnown RBP21.55■■□□□ 1.04
C11orf88-202ENST00000375618 SPG7Q9UQ90 795 aa21.55■■□□□ 1.04
C11orf88-202ENST00000375618 PROM2Q8N271 834 aa21.54■■□□□ 1.04
C11orf88-202ENST00000375618 RGPD3A6NKT7 1758 aaPredicted RBP21.53■■□□□ 1.04
C11orf88-202ENST00000375618 RGPD4Q7Z3J3 1758 aa21.53■■□□□ 1.04
C11orf88-202ENST00000375618 NUP188Q5SRE5 1749 aa21.53■■□□□ 1.04
C11orf88-202ENST00000375618 PHKG2P15735 406 aa21.53■■□□□ 1.04
C11orf88-202ENST00000375618 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
C11orf88-202ENST00000375618 PLEKHG2Q9H7P9 1386 aa21.52■■□□□ 1.04
C11orf88-202ENST00000375618 PLSCR1O15162 318 aa21.52■■□□□ 1.04
C11orf88-202ENST00000375618 U2SURPO15042 1029 aaKnown RBP21.51■■□□□ 1.03
C11orf88-202ENST00000375618 SYTL4Q96C24 671 aaPredicted RBP21.5■■□□□ 1.03
C11orf88-202ENST00000375618 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
C11orf88-202ENST00000375618 PLEKHO1Q53GL0 409 aaPredicted RBP21.49■■□□□ 1.03
C11orf88-202ENST00000375618 ZNF530Q6P9A1 599 aaPredicted RBP21.49■■□□□ 1.03
C11orf88-202ENST00000375618 RALBP1Q15311 655 aa21.48■■□□□ 1.03
C11orf88-202ENST00000375618 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
C11orf88-202ENST00000375618 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
C11orf88-202ENST00000375618 AMOTQ4VCS5 1084 aa21.47■■□□□ 1.03
C11orf88-202ENST00000375618 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
C11orf88-202ENST00000375618 ITGB4P16144 1822 aa21.47■■□□□ 1.03
C11orf88-202ENST00000375618 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
C11orf88-202ENST00000375618 RSPH6AQ9H0K4 717 aa21.45■■□□□ 1.02
C11orf88-202ENST00000375618 ANO8Q9HCE9 1232 aaPredicted RBP21.45■■□□□ 1.02
C11orf88-202ENST00000375618 PSDA5PKW4 1024 aaPredicted RBP21.44■■□□□ 1.02
C11orf88-202ENST00000375618 MTHFSDQ2M296 383 aaKnown RBP21.44■■□□□ 1.02
C11orf88-202ENST00000375618 MPRIPQ6WCQ1 1025 aa21.44■■□□□ 1.02
C11orf88-202ENST00000375618 PIGBQ92521 554 aa21.44■■□□□ 1.02
C11orf88-202ENST00000375618 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
C11orf88-202ENST00000375618 KCNQ4P56696 695 aa21.43■■□□□ 1.02
C11orf88-202ENST00000375618 LRRC4BQ9NT99 713 aa21.43■■□□□ 1.02
C11orf88-202ENST00000375618 MYBBP1AQ9BQG0 1328 aaKnown RBP21.43■■□□□ 1.02
C11orf88-202ENST00000375618 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
C11orf88-202ENST00000375618 PRKAR2BP31323 418 aa21.42■■□□□ 1.02
C11orf88-202ENST00000375618 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
C11orf88-202ENST00000375618 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
C11orf88-202ENST00000375618 LY75O60449 1722 aa21.41■■□□□ 1.02
C11orf88-202ENST00000375618 PAPPAQ13219 1627 aa21.41■■□□□ 1.02
C11orf88-202ENST00000375618 R3HDM1Q15032 1099 aaKnown RBP21.41■■□□□ 1.02
C11orf88-202ENST00000375618 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
C11orf88-202ENST00000375618 DCAF5Q96JK2 942 aa21.4■■□□□ 1.02
C11orf88-202ENST00000375618 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.01
C11orf88-202ENST00000375618 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
C11orf88-202ENST00000375618 AKAP4Q5JQC9 854 aa21.38■■□□□ 1.01
C11orf88-202ENST00000375618 LGR6Q9HBX8 967 aa21.38■■□□□ 1.01
C11orf88-202ENST00000375618 ADAMTS7Q9UKP4 1686 aa21.37■■□□□ 1.01
C11orf88-202ENST00000375618 PALLDQ8WX93 1383 aa21.37■■□□□ 1.01
C11orf88-202ENST00000375618 TMOD3Q9NYL9 352 aa21.37■■□□□ 1.01
C11orf88-202ENST00000375618 ASAP1Q9ULH1 1129 aa21.37■■□□□ 1.01
C11orf88-202ENST00000375618 SCN11AQ9UI33 1791 aa21.37■■□□□ 1.01
C11orf88-202ENST00000375618 ERVV-2B6SEH9 535 aa21.36■■□□□ 1.01
C11orf88-202ENST00000375618 FCHSD2O94868 740 aa21.35■■□□□ 1.01
C11orf88-202ENST00000375618 ZNF827Q17R98 1081 aa21.35■■□□□ 1.01
C11orf88-202ENST00000375618 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
C11orf88-202ENST00000375618 RNMTO43148 476 aaKnown RBP21.34■■□□□ 1.01
C11orf88-202ENST00000375618 SLC27A3Q5K4L6 730 aa21.34■■□□□ 1.01
C11orf88-202ENST00000375618 NBPF14Q5TI25 921 aa21.34■■□□□ 1.01
C11orf88-202ENST00000375618 MRC1P22897 1456 aa21.33■■□□□ 1.01
C11orf88-202ENST00000375618 CABP4P57796 275 aa21.33■■□□□ 1.01
C11orf88-202ENST00000375618 PLEKHF1Q96S99 279 aa21.33■■□□□ 1.01
C11orf88-202ENST00000375618 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1.01
C11orf88-202ENST00000375618 CCNL1Q9UK58 526 aaPredicted RBP21.33■■□□□ 1.01
C11orf88-202ENST00000375618 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
C11orf88-202ENST00000375618 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
C11orf88-202ENST00000375618 MAP3K5Q99683 1374 aa21.32■■□□□ 1
C11orf88-202ENST00000375618 CCDC184Q52MB2 194 aa21.31■■□□□ 1
C11orf88-202ENST00000375618 IL17REQ8NFR9 667 aa21.31■■□□□ 1
C11orf88-202ENST00000375618 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
C11orf88-202ENST00000375618 SLC15A2Q16348 729 aa21.3■■□□□ 1
C11orf88-202ENST00000375618 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
C11orf88-202ENST00000375618 AKT1S1Q96B36 256 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms