RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ABTB2Q8N961 1025 aa21.23■□□□□ 0.99
RXRB-201ENST00000374680 CHMP5Q9NZZ3 219 aa21.23■□□□□ 0.99
RXRB-201ENST00000374680 MCM4P33991 863 aa21.22■□□□□ 0.99
RXRB-201ENST00000374680 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
RXRB-201ENST00000374680 USP6P35125 1406 aa21.21■□□□□ 0.99
RXRB-201ENST00000374680 MSH6P52701 1360 aa21.21■□□□□ 0.99
RXRB-201ENST00000374680 CEP85Q6P2H3 762 aa21.2■□□□□ 0.98
RXRB-201ENST00000374680 DCTPP1Q9H773 170 aa21.2■□□□□ 0.98
RXRB-201ENST00000374680 KIF2CQ99661 725 aa21.2■□□□□ 0.98
RXRB-201ENST00000374680 EXOC6BQ9Y2D4 811 aa21.2■□□□□ 0.98
RXRB-201ENST00000374680 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
RXRB-201ENST00000374680 XPCQ01831 940 aaPredicted RBP21.19■□□□□ 0.98
RXRB-201ENST00000374680 INTS3Q68E01 1043 aaKnown RBP21.19■□□□□ 0.98
RXRB-201ENST00000374680 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
RXRB-201ENST00000374680 FKBP5Q13451 457 aaPredicted RBP21.18■□□□□ 0.98
RXRB-201ENST00000374680 RBM25P49756 843 aaKnown RBP21.18■□□□□ 0.98
RXRB-201ENST00000374680 ANKRD44Q8N8A2 993 aa21.18■□□□□ 0.98
RXRB-201ENST00000374680 PIK3R4Q99570 1358 aa21.17■□□□□ 0.98
RXRB-201ENST00000374680 CDC45O75419 566 aa21.17■□□□□ 0.98
RXRB-201ENST00000374680 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.17■□□□□ 0.98
RXRB-201ENST00000374680 EIF2S2P20042 333 aaKnown RBP21.16■□□□□ 0.98
RXRB-201ENST00000374680 TECPR2O15040 1411 aa21.16■□□□□ 0.98
RXRB-201ENST00000374680 TRAK2O60296 914 aa21.15■□□□□ 0.98
RXRB-201ENST00000374680 STK31Q9BXU1 1019 aa21.15■□□□□ 0.98
RXRB-201ENST00000374680 PLEKHG1Q9ULL1 1385 aa21.15■□□□□ 0.98
RXRB-201ENST00000374680 REREQ9P2R6 1566 aa21.14■□□□□ 0.98
RXRB-201ENST00000374680 OVOS2A0A0J9YW53 1432 aa21.14■□□□□ 0.98
RXRB-201ENST00000374680 OVOS2Q6IE36 1432 aa21.14■□□□□ 0.98
RXRB-201ENST00000374680 SDSP20132 328 aa21.14■□□□□ 0.97
RXRB-201ENST00000374680 THEMISQ8N1K5 641 aaPredicted RBP21.14■□□□□ 0.97
RXRB-201ENST00000374680 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.14■□□□□ 0.97
RXRB-201ENST00000374680 TTC22Q5TAA0 569 aa21.13■□□□□ 0.97
RXRB-201ENST00000374680 TNPO1Q92973 898 aaKnown RBP21.13■□□□□ 0.97
RXRB-201ENST00000374680 GAS2L2Q8NHY3 880 aa21.13■□□□□ 0.97
RXRB-201ENST00000374680 TBX22Q9Y458 520 aa21.12■□□□□ 0.97
RXRB-201ENST00000374680 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
RXRB-201ENST00000374680 SETD1BQ9UPS6 1966 aaKnown RBP21.12■□□□□ 0.97
RXRB-201ENST00000374680 ANXA1P04083 346 aa21.12■□□□□ 0.97
RXRB-201ENST00000374680 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
RXRB-201ENST00000374680 RPAP2Q8IXW5 612 aaPredicted RBP21.11■□□□□ 0.97
RXRB-201ENST00000374680 HOXC9P31274 260 aa21.11■□□□□ 0.97
RXRB-201ENST00000374680 PANK2Q9BZ23 570 aa21.11■□□□□ 0.97
RXRB-201ENST00000374680 FLT4P35916 1363 aa21.1■□□□□ 0.97
RXRB-201ENST00000374680 HAP1P54257 671 aaPredicted RBP21.1■□□□□ 0.97
RXRB-201ENST00000374680 CRB1P82279 1406 aa21.1■□□□□ 0.97
RXRB-201ENST00000374680 GNAT3A8MTJ3 354 aa21.1■□□□□ 0.97
RXRB-201ENST00000374680 FLIIQ13045 1269 aa21.1■□□□□ 0.97
RXRB-201ENST00000374680 NOL8Q76FK4 1167 aaKnown RBP21.09■□□□□ 0.97
RXRB-201ENST00000374680 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
RXRB-201ENST00000374680 RGS12O14924 1447 aa21.09■□□□□ 0.97
RXRB-201ENST00000374680 C3P01024 1663 aa21.09■□□□□ 0.97
RXRB-201ENST00000374680 RIMS1Q86UR5 1692 aaKnown RBP21.09■□□□□ 0.97
RXRB-201ENST00000374680 PNMA6EA0A0J9YXQ4 647 aa21.08■□□□□ 0.97
RXRB-201ENST00000374680 K7ELQ4 463 aaPredicted RBP21.08■□□□□ 0.97
RXRB-201ENST00000374680 SSFA2P28290 1259 aa21.08■□□□□ 0.97
RXRB-201ENST00000374680 ESCO1Q5FWF5 840 aa21.08■□□□□ 0.97
RXRB-201ENST00000374680 FOXD4L5Q5VV16 416 aaPredicted RBP21.08■□□□□ 0.97
RXRB-201ENST00000374680 FOXD4L4Q8WXT5 416 aaPredicted RBP21.08■□□□□ 0.97
RXRB-201ENST00000374680 ITSN1Q15811 1721 aa21.08■□□□□ 0.97
RXRB-201ENST00000374680 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.96
RXRB-201ENST00000374680 PTPRCP08575 1304 aa21.08■□□□□ 0.96
RXRB-201ENST00000374680 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.96
RXRB-201ENST00000374680 TTC21AQ8NDW8 1320 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 RILPL2Q969X0 211 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 IL1RAPL2Q9NP60 686 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 UBR1Q8IWV7 1749 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 LGR6Q9HBX8 967 aa21.07■□□□□ 0.96
RXRB-201ENST00000374680 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
RXRB-201ENST00000374680 USP31Q70CQ4 1352 aa21.06■□□□□ 0.96
RXRB-201ENST00000374680 GOLGA6L3A6NEY3 463 aa21.06■□□□□ 0.96
RXRB-201ENST00000374680 SNX21Q969T3 373 aa21.06■□□□□ 0.96
RXRB-201ENST00000374680 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
RXRB-201ENST00000374680 ATP10DQ9P241 1426 aa21.06■□□□□ 0.96
RXRB-201ENST00000374680 CEP170BQ9Y4F5 1589 aaPredicted RBP21.06■□□□□ 0.96
RXRB-201ENST00000374680 TRIM6-TRIM34B2RNG4 842 aa21.06■□□□□ 0.96
RXRB-201ENST00000374680 LRRFIP2Q9Y608 721 aaKnown RBP21.06■□□□□ 0.96
RXRB-201ENST00000374680 KCNQ3O43525 872 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 MAP4K4O95819 1239 aaPredicted RBP21.05■□□□□ 0.96
RXRB-201ENST00000374680 GNAI2P04899 355 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 PSME1Q06323 249 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 IGSF1Q8N6C5 1336 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 HMMRO75330 724 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 XRCC6P12956 609 aaKnown RBP eCLIP21.05■□□□□ 0.963e-10■□□□□ 11
RXRB-201ENST00000374680 CHAMP1Q96JM3 812 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 USP26Q9BXU7 913 aa21.05■□□□□ 0.96
RXRB-201ENST00000374680 KIAA0232Q92628 1395 aa21.04■□□□□ 0.96
RXRB-201ENST00000374680 HDGFL1Q5TGJ6 251 aa21.04■□□□□ 0.96
RXRB-201ENST00000374680 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
RXRB-201ENST00000374680 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
RXRB-201ENST00000374680 PHF8Q9UPP1 1060 aa21.03■□□□□ 0.96
RXRB-201ENST00000374680 CCT4P50991 539 aaKnown RBP21.03■□□□□ 0.96
RXRB-201ENST00000374680 NBPF6Q5VWK0 638 aa21.03■□□□□ 0.96
RXRB-201ENST00000374680 NBPF4Q96M43 638 aa21.03■□□□□ 0.96
RXRB-201ENST00000374680 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
RXRB-201ENST00000374680 PKP1Q13835 747 aa21.02■□□□□ 0.96
RXRB-201ENST00000374680 MPRIPQ6WCQ1 1025 aa21.02■□□□□ 0.96
RXRB-201ENST00000374680 PDE1AP54750 535 aa21.02■□□□□ 0.96
RXRB-201ENST00000374680 TAF7Q15545 349 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms