RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 MEIS3Q99687 375 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 SRCIN1Q9C0H9 1055 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
HERC4-202ENST00000373700 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 CEP152O94986 1710 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 VAMP4O75379 141 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 HOXC9P31274 260 aa9.51□□□□□ -0.89
HERC4-202ENST00000373700 G3BP1Q13283 466 aaKnown RBP eCLIP9.51□□□□□ -0.89
HERC4-202ENST00000373700 AEBP2Q6ZN18 517 aaPredicted RBP9.51□□□□□ -0.89
HERC4-202ENST00000373700 TET3O43151 1660 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 KIF1BO60333 1816 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 UNC13BO14795 1591 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 GNAI3P08754 354 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 FLIIQ13045 1269 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 C16orf71Q8IYS4 520 aaPredicted RBP9.5□□□□□ -0.89
HERC4-202ENST00000373700 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 RNF17Q9BXT8 1623 aaKnown RBP9.5□□□□□ -0.89
HERC4-202ENST00000373700 MCM4P33991 863 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 G2E3Q7L622 706 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 NUTM1Q86Y26 1132 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 RNF214Q8ND24 703 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 PUS7Q96PZ0 661 aaKnown RBP9.5□□□□□ -0.89
HERC4-202ENST00000373700 LGR6Q9HBX8 967 aa9.5□□□□□ -0.89
HERC4-202ENST00000373700 PI4KAP2A4QPH2 592 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 DRC7Q8IY82 874 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 PI4KAP1Q8N8J0 262 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 LRRFIP2Q9Y608 721 aaKnown RBP9.49□□□□□ -0.89
HERC4-202ENST00000373700 ALDH1L2Q3SY69 923 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 MEX3CQ5U5Q3 659 aaKnown RBP9.49□□□□□ -0.89
HERC4-202ENST00000373700 CAVIN1Q6NZI2 390 aaKnown RBP9.49□□□□□ -0.89
HERC4-202ENST00000373700 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
HERC4-202ENST00000373700 FOSBP53539 338 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 NBPF6Q5VWK0 638 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 NBPF4Q96M43 638 aa9.49□□□□□ -0.89
HERC4-202ENST00000373700 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
HERC4-202ENST00000373700 RIMBP3CA6NJZ7 1639 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 RIMBP3BA6NNM3 1639 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 TRPM1Q7Z4N2 1603 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 RIMBP3Q9UFD9 1639 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 TTC21AQ8NDW8 1320 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
HERC4-202ENST00000373700 MPNDQ8N594 471 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 CHPF2Q9P2E5 772 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 KDM2BQ8NHM5 1336 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 CFAP74Q9C0B2 1584 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 NFATC2IPQ8NCF5 419 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
HERC4-202ENST00000373700 PHAXQ9H814 394 aaKnown RBP9.48□□□□□ -0.89
HERC4-202ENST00000373700 SETD1BQ9UPS6 1966 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 MYOM2P54296 1465 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 FLT4P35916 1363 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 SBNO2Q9Y2G9 1366 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 CCT4P50991 539 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 SPHKAPQ2M3C7 1700 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 KIDINS220Q9ULH0 1771 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 ARAP3Q8WWN8 1544 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 EDC4Q6P2E9 1401 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 HDAC5Q9UQL6 1122 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 MRPL50Q8N5N7 158 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
HERC4-202ENST00000373700 KDM5AP29375 1690 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 PPRC1Q5VV67 1664 aaKnown RBP9.47□□□□□ -0.89
HERC4-202ENST00000373700 A2ML1A8K2U0 1454 aa9.46□□□□□ -0.89
HERC4-202ENST00000373700 DNAJC2Q99543 621 aaKnown RBP9.46□□□□□ -0.89
HERC4-202ENST00000373700 TOMM22Q9NS69 142 aa9.46□□□□□ -0.89
HERC4-202ENST00000373700 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.89
HERC4-202ENST00000373700 PLEKHG3A1L390 1219 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 PTMSP20962 102 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 SKOR2Q2VWA4 1001 aaPredicted RBP9.46□□□□□ -0.9
HERC4-202ENST00000373700 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 RPAP2Q8IXW5 612 aaPredicted RBP9.46□□□□□ -0.9
HERC4-202ENST00000373700 MAP3K4Q9Y6R4 1608 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 ZMYM4Q5VZL5 1548 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 ERC2O15083 957 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 NUCB2P80303 420 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 MYD88Q99836 296 aa9.46□□□□□ -0.9
HERC4-202ENST00000373700 KCNQ3O43525 872 aa9.45□□□□□ -0.9
HERC4-202ENST00000373700 ZKSCAN1P17029 563 aaPredicted RBP9.45□□□□□ -0.9
HERC4-202ENST00000373700 RABEP1Q15276 862 aa9.45□□□□□ -0.9
HERC4-202ENST00000373700 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
HERC4-202ENST00000373700 ANO8Q9HCE9 1232 aaPredicted RBP9.45□□□□□ -0.9
HERC4-202ENST00000373700 ZBTB40Q9NUA8 1239 aa9.45□□□□□ -0.9
HERC4-202ENST00000373700 MSH6P52701 1360 aa9.45□□□□□ -0.9
HERC4-202ENST00000373700 CWC27Q6UX04 472 aaKnown RBP9.45□□□□□ -0.9
HERC4-202ENST00000373700 ABCA6Q8N139 1617 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 PLEKHF1Q96S99 279 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 MAP3K2Q9Y2U5 619 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 NPHP3Q7Z494 1330 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 GPTP24298 496 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms