RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 APBA3O96018 575 aa16.27■□□□□ 0.2
HDAC8-201ENST00000373554 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
HDAC8-201ENST00000373554 IGSF1Q8N6C5 1336 aa16.26■□□□□ 0.19
HDAC8-201ENST00000373554 SHANK3Q9BYB0 1731 aa16.26■□□□□ 0.19
HDAC8-201ENST00000373554 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
HDAC8-201ENST00000373554 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
HDAC8-201ENST00000373554 NHSQ6T4R5 1651 aa16.26■□□□□ 0.19
HDAC8-201ENST00000373554 PCDH11XQ9BZA7 1347 aa16.25■□□□□ 0.19
HDAC8-201ENST00000373554 PCDH11YQ9BZA8 1340 aa16.25■□□□□ 0.19
HDAC8-201ENST00000373554 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
HDAC8-201ENST00000373554 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
HDAC8-201ENST00000373554 ACSBG1Q96GR2 724 aa16.23■□□□□ 0.19
HDAC8-201ENST00000373554 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
HDAC8-201ENST00000373554 IL13P35225 146 aa16.22■□□□□ 0.19
HDAC8-201ENST00000373554 EZH2Q15910 746 aaKnown RBP16.22■□□□□ 0.19
HDAC8-201ENST00000373554 RGPD3A6NKT7 1758 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-201ENST00000373554 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
HDAC8-201ENST00000373554 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
HDAC8-201ENST00000373554 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
HDAC8-201ENST00000373554 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
HDAC8-201ENST00000373554 CAMKK2Q96RR4 588 aa16.21■□□□□ 0.19
HDAC8-201ENST00000373554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.191e-6■■□□□ 14.2
HDAC8-201ENST00000373554 PLSCR1O15162 318 aa16.2■□□□□ 0.18
HDAC8-201ENST00000373554 KCNQ2O43526 872 aa16.2■□□□□ 0.18
HDAC8-201ENST00000373554 PTF1AQ7RTS3 328 aa16.2■□□□□ 0.18
HDAC8-201ENST00000373554 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
HDAC8-201ENST00000373554 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
HDAC8-201ENST00000373554 RREB1Q92766 1687 aa16.2■□□□□ 0.18
HDAC8-201ENST00000373554 KDRP35968 1356 aa16.19■□□□□ 0.18
HDAC8-201ENST00000373554 PPP2R1AP30153 589 aa16.19■□□□□ 0.18
HDAC8-201ENST00000373554 SULT6B1Q6IMI4 303 aa16.19■□□□□ 0.18
HDAC8-201ENST00000373554 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-201ENST00000373554 CYP27B1O15528 508 aa16.18■□□□□ 0.18
HDAC8-201ENST00000373554 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
HDAC8-201ENST00000373554 BTAF1O14981 1849 aa16.17■□□□□ 0.18
HDAC8-201ENST00000373554 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
HDAC8-201ENST00000373554 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
HDAC8-201ENST00000373554 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
HDAC8-201ENST00000373554 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
HDAC8-201ENST00000373554 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
HDAC8-201ENST00000373554 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
HDAC8-201ENST00000373554 HMOX1P09601 288 aa16.14■□□□□ 0.17
HDAC8-201ENST00000373554 PHKG2P15735 406 aa16.14■□□□□ 0.17
HDAC8-201ENST00000373554 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
HDAC8-201ENST00000373554 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
HDAC8-201ENST00000373554 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
HDAC8-201ENST00000373554 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
HDAC8-201ENST00000373554 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
HDAC8-201ENST00000373554 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
HDAC8-201ENST00000373554 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
HDAC8-201ENST00000373554 RALBP1Q15311 655 aa16.12■□□□□ 0.17
HDAC8-201ENST00000373554 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
HDAC8-201ENST00000373554 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
HDAC8-201ENST00000373554 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
HDAC8-201ENST00000373554 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
HDAC8-201ENST00000373554 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
HDAC8-201ENST00000373554 R3HDM1Q15032 1099 aaKnown RBP16.09■□□□□ 0.17
HDAC8-201ENST00000373554 PROM2Q8N271 834 aa16.09■□□□□ 0.17
HDAC8-201ENST00000373554 DCAF5Q96JK2 942 aa16.09■□□□□ 0.17
HDAC8-201ENST00000373554 ITGB4P16144 1822 aa16.08■□□□□ 0.17
HDAC8-201ENST00000373554 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-201ENST00000373554 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
HDAC8-201ENST00000373554 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.16
HDAC8-201ENST00000373554 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
HDAC8-201ENST00000373554 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
HDAC8-201ENST00000373554 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
HDAC8-201ENST00000373554 LY75O60449 1722 aa16.07■□□□□ 0.16
HDAC8-201ENST00000373554 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
HDAC8-201ENST00000373554 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
HDAC8-201ENST00000373554 PAPPAQ13219 1627 aa16.05■□□□□ 0.16
HDAC8-201ENST00000373554 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
HDAC8-201ENST00000373554 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
HDAC8-201ENST00000373554 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
HDAC8-201ENST00000373554 PIGBQ92521 554 aa16.05■□□□□ 0.16
HDAC8-201ENST00000373554 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-201ENST00000373554 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-201ENST00000373554 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
HDAC8-201ENST00000373554 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-201ENST00000373554 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
HDAC8-201ENST00000373554 RSPH6AQ9H0K4 717 aa16.04■□□□□ 0.16
HDAC8-201ENST00000373554 FCHSD2O94868 740 aa16.03■□□□□ 0.16
HDAC8-201ENST00000373554 CABP4P57796 275 aa16.03■□□□□ 0.16
HDAC8-201ENST00000373554 PRKRIP1Q9H875 184 aaPredicted RBP16.03■□□□□ 0.16
HDAC8-201ENST00000373554 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
HDAC8-201ENST00000373554 HMGB2P26583 209 aaKnown RBP16.02■□□□□ 0.16
HDAC8-201ENST00000373554 SLC15A2Q16348 729 aa16.02■□□□□ 0.16
HDAC8-201ENST00000373554 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
HDAC8-201ENST00000373554 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
HDAC8-201ENST00000373554 NEFMP07197 916 aa16.01■□□□□ 0.15
HDAC8-201ENST00000373554 MRC1P22897 1456 aa16■□□□□ 0.15
HDAC8-201ENST00000373554 KCNQ4P56696 695 aa16■□□□□ 0.15
HDAC8-201ENST00000373554 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
HDAC8-201ENST00000373554 C5P01031 1676 aa15.99■□□□□ 0.15
HDAC8-201ENST00000373554 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
HDAC8-201ENST00000373554 LRP5O75197 1615 aa15.99■□□□□ 0.15
HDAC8-201ENST00000373554 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
HDAC8-201ENST00000373554 GNAT3A8MTJ3 354 aa15.98■□□□□ 0.15
HDAC8-201ENST00000373554 RNMTO43148 476 aaKnown RBP15.98■□□□□ 0.15
HDAC8-201ENST00000373554 SIK1P57059 783 aa15.98■□□□□ 0.15
HDAC8-201ENST00000373554 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms