RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.28
LMX1B-202ENST00000373474 SPATA32Q96LK8 384 aa16.77■□□□□ 0.28
LMX1B-202ENST00000373474 EPS15P42566 896 aa16.77■□□□□ 0.28
LMX1B-202ENST00000373474 ZNF530Q6P9A1 599 aaPredicted RBP16.77■□□□□ 0.28
LMX1B-202ENST00000373474 CWC27Q6UX04 472 aaKnown RBP16.77■□□□□ 0.28
LMX1B-202ENST00000373474 DACH1Q9UI36 760 aa16.77■□□□□ 0.28
LMX1B-202ENST00000373474 GIMAP7Q8NHV1 300 aa16.77■□□□□ 0.27
LMX1B-202ENST00000373474 FBXO3Q9UK99 471 aa16.77■□□□□ 0.27
LMX1B-202ENST00000373474 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.27
LMX1B-202ENST00000373474 DYDC1Q8WWB3 177 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
LMX1B-202ENST00000373474 SERPINC1P01008 464 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 ME1P48163 572 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 MAGEC2Q9UBF1 373 aaPredicted RBP16.76■□□□□ 0.27
LMX1B-202ENST00000373474 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
LMX1B-202ENST00000373474 TXLNBQ8N3L3 684 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 TXLNAP40222 546 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 ANKRD18AQ8IVF6 992 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
LMX1B-202ENST00000373474 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
LMX1B-202ENST00000373474 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
LMX1B-202ENST00000373474 KRT32Q14532 448 aa16.75■□□□□ 0.27
LMX1B-202ENST00000373474 TTLL5Q6EMB2 1281 aa16.75■□□□□ 0.27
LMX1B-202ENST00000373474 CFAP45Q9UL16 551 aa16.75■□□□□ 0.27
LMX1B-202ENST00000373474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.27
LMX1B-202ENST00000373474 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 CBFA2T2O43439 604 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 CABP4P57796 275 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 IL1RAPL2Q9NP60 686 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 PLB1Q6P1J6 1458 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 CCDC43Q96MW1 224 aaKnown RBP16.74■□□□□ 0.27
LMX1B-202ENST00000373474 ATP2B1P20020 1258 aa16.74■□□□□ 0.27
LMX1B-202ENST00000373474 MX1P20591 662 aa16.73■□□□□ 0.27
LMX1B-202ENST00000373474 ZSCAN25Q6NSZ9 544 aa16.73■□□□□ 0.27
LMX1B-202ENST00000373474 ZSCAN30Q86W11 494 aa16.73■□□□□ 0.27
LMX1B-202ENST00000373474 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
LMX1B-202ENST00000373474 SYCE3A1L190 88 aa16.73■□□□□ 0.27
LMX1B-202ENST00000373474 CASTP20810 708 aaKnown RBP16.73■□□□□ 0.27
LMX1B-202ENST00000373474 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
LMX1B-202ENST00000373474 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
LMX1B-202ENST00000373474 LUC7LQ9NQ29 371 aaKnown RBP16.72■□□□□ 0.27
LMX1B-202ENST00000373474 NSD2O96028 1365 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 MYL6BP14649 208 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
LMX1B-202ENST00000373474 SMARCA5O60264 1052 aaPredicted RBP16.71■□□□□ 0.27
LMX1B-202ENST00000373474 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
LMX1B-202ENST00000373474 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
LMX1B-202ENST00000373474 CDKL5O76039 1030 aa16.71■□□□□ 0.27
LMX1B-202ENST00000373474 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
LMX1B-202ENST00000373474 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.26
LMX1B-202ENST00000373474 PPFIBP1Q86W92 1011 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 MPNDQ8N594 471 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 NACAP1Q9BZK3 213 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 GNL3LQ9NVN8 582 aaKnown RBP16.7■□□□□ 0.26
LMX1B-202ENST00000373474 ZNHIT6Q9NWK9 470 aaKnown RBP16.7■□□□□ 0.26
LMX1B-202ENST00000373474 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 CDK5RAP3Q96JB5 506 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 EXOC6BQ9Y2D4 811 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
LMX1B-202ENST00000373474 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
LMX1B-202ENST00000373474 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
LMX1B-202ENST00000373474 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
LMX1B-202ENST00000373474 MCM10Q7L590 875 aa16.69■□□□□ 0.26
LMX1B-202ENST00000373474 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
LMX1B-202ENST00000373474 NEFHP12036 1026 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 SKIDA1Q1XH10 827 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
LMX1B-202ENST00000373474 SEPT7Q16181 437 aaKnown RBP16.68■□□□□ 0.26
LMX1B-202ENST00000373474 CCDC183Q5T5S1 534 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 EZRP15311 586 aaKnown RBP16.68■□□□□ 0.26
LMX1B-202ENST00000373474 GBP3Q9H0R5 595 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 TRIM27P14373 513 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
LMX1B-202ENST00000373474 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
LMX1B-202ENST00000373474 ZFYVE27Q5T4F4 411 aa16.67■□□□□ 0.26
LMX1B-202ENST00000373474 CCDC181Q5TID7 509 aa16.67■□□□□ 0.26
LMX1B-202ENST00000373474 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
LMX1B-202ENST00000373474 KIF2AO00139 706 aaPredicted RBP16.67■□□□□ 0.26
LMX1B-202ENST00000373474 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
LMX1B-202ENST00000373474 PROSER2Q86WR7 435 aaPredicted RBP16.67■□□□□ 0.26
LMX1B-202ENST00000373474 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
LMX1B-202ENST00000373474 RAPGEF3O95398 923 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms