RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 ZCRB1Q8TBF4 217 aaKnown RBP28.97■■■□□ 2.23
TMEM54-202ENST00000373463 BCL11BQ9C0K0 894 aaPredicted RBP28.97■■■□□ 2.23
TMEM54-202ENST00000373463 KCNQ2O43526 872 aa28.96■■■□□ 2.23
TMEM54-202ENST00000373463 DDX54Q8TDD1 881 aaKnown RBP28.96■■■□□ 2.23
TMEM54-202ENST00000373463 RAPGEF4Q8WZA2 1011 aa28.96■■■□□ 2.23
TMEM54-202ENST00000373463 RGPD3A6NKT7 1758 aaPredicted RBP28.96■■■□□ 2.23
TMEM54-202ENST00000373463 RGPD4Q7Z3J3 1758 aa28.96■■■□□ 2.23
TMEM54-202ENST00000373463 IGSF1Q8N6C5 1336 aa28.94■■■□□ 2.22
TMEM54-202ENST00000373463 NUP188Q5SRE5 1749 aa28.94■■■□□ 2.22
TMEM54-202ENST00000373463 TATP17735 454 aaPredicted RBP28.94■■■□□ 2.22
TMEM54-202ENST00000373463 CNGB1Q14028 1251 aaPredicted RBP28.94■■■□□ 2.22
TMEM54-202ENST00000373463 ACSBG1Q96GR2 724 aa28.94■■■□□ 2.22
TMEM54-202ENST00000373463 DOT1LQ8TEK3 1739 aa28.94■■■□□ 2.22
TMEM54-202ENST00000373463 MTHFSP49914 203 aa28.93■■■□□ 2.22
TMEM54-202ENST00000373463 BTAF1O14981 1849 aa28.92■■■□□ 2.22
TMEM54-202ENST00000373463 PARD3Q8TEW0 1356 aa28.91■■■□□ 2.22
TMEM54-202ENST00000373463 IL13P35225 146 aa28.89■■■□□ 2.22
TMEM54-202ENST00000373463 PLSCR1O15162 318 aa28.88■■■□□ 2.21
TMEM54-202ENST00000373463 CYP27B1O15528 508 aa28.88■■■□□ 2.21
TMEM54-202ENST00000373463 COL3A1P02461 1466 aaPredicted RBP28.88■■■□□ 2.21
TMEM54-202ENST00000373463 KAT6BQ8WYB5 2073 aa28.87■■■□□ 2.21
TMEM54-202ENST00000373463 TOGARAM1Q9Y4F4 1720 aa28.86■■■□□ 2.21
TMEM54-202ENST00000373463 AEBP1Q8IUX7 1158 aa28.85■■■□□ 2.21
TMEM54-202ENST00000373463 PROM2Q8N271 834 aa28.85■■■□□ 2.21
TMEM54-202ENST00000373463 PCDH11XQ9BZA7 1347 aa28.85■■■□□ 2.21
TMEM54-202ENST00000373463 PCDH11YQ9BZA8 1340 aa28.85■■■□□ 2.21
TMEM54-202ENST00000373463 ZEB1P37275 1124 aaPredicted RBP28.83■■■□□ 2.21
TMEM54-202ENST00000373463 KDRP35968 1356 aa28.82■■■□□ 2.2
TMEM54-202ENST00000373463 PRIM1P49642 420 aaKnown RBP28.81■■■□□ 2.2
TMEM54-202ENST00000373463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.81■■■□□ 2.2
TMEM54-202ENST00000373463 PLEKHG2Q9H7P9 1386 aa28.79■■■□□ 2.2
TMEM54-202ENST00000373463 PSDA5PKW4 1024 aaPredicted RBP28.78■■■□□ 2.2
TMEM54-202ENST00000373463 SPG7Q9UQ90 795 aa28.78■■■□□ 2.2
TMEM54-202ENST00000373463 ITGB4P16144 1822 aa28.78■■■□□ 2.2
TMEM54-202ENST00000373463 SULT6B1Q6IMI4 303 aa28.77■■■□□ 2.2
TMEM54-202ENST00000373463 PPP2R1AP30153 589 aa28.76■■■□□ 2.19
TMEM54-202ENST00000373463 NKX1-1Q15270 411 aaPredicted RBP28.76■■■□□ 2.19
TMEM54-202ENST00000373463 TXNRD1Q16881 649 aa28.76■■■□□ 2.19
TMEM54-202ENST00000373463 DIAPH1O60610 1272 aaKnown RBP28.74■■■□□ 2.19
TMEM54-202ENST00000373463 PHKG2P15735 406 aa28.74■■■□□ 2.19
TMEM54-202ENST00000373463 DDX10Q13206 875 aaKnown RBP28.74■■■□□ 2.19
TMEM54-202ENST00000373463 R3HDM1Q15032 1099 aaKnown RBP28.74■■■□□ 2.19
TMEM54-202ENST00000373463 SYTL4Q96C24 671 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-202ENST00000373463 ANO8Q9HCE9 1232 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-202ENST00000373463 LY75O60449 1722 aa28.74■■■□□ 2.19
TMEM54-202ENST00000373463 PAPPAQ13219 1627 aa28.72■■■□□ 2.19
TMEM54-202ENST00000373463 HMOX1P09601 288 aa28.7■■■□□ 2.18
TMEM54-202ENST00000373463 IFNL2Q8IZJ0 200 aa28.69■■■□□ 2.18
TMEM54-202ENST00000373463 LRRC4BQ9NT99 713 aa28.69■■■□□ 2.18
TMEM54-202ENST00000373463 PLEKHO1Q53GL0 409 aaPredicted RBP28.67■■■□□ 2.18
TMEM54-202ENST00000373463 KDM6AO15550 1401 aaPredicted RBP28.66■■■□□ 2.18
TMEM54-202ENST00000373463 AMOTQ4VCS5 1084 aa28.65■■■□□ 2.18
TMEM54-202ENST00000373463 ZNF530Q6P9A1 599 aaPredicted RBP28.65■■■□□ 2.18
TMEM54-202ENST00000373463 NBPF14Q5TI25 921 aa28.64■■■□□ 2.18
TMEM54-202ENST00000373463 MPRIPQ6WCQ1 1025 aa28.64■■■□□ 2.18
TMEM54-202ENST00000373463 KCNQ4P56696 695 aa28.63■■■□□ 2.17
TMEM54-202ENST00000373463 PIGBQ92521 554 aa28.63■■■□□ 2.17
TMEM54-202ENST00000373463 CASZ1Q86V15 1759 aa28.61■■■□□ 2.17
TMEM54-202ENST00000373463 U2SURPO15042 1029 aaKnown RBP28.61■■■□□ 2.17
TMEM54-202ENST00000373463 CFAP53Q96M91 514 aa28.6■■■□□ 2.17
TMEM54-202ENST00000373463 LRP5O75197 1615 aa28.6■■■□□ 2.17
TMEM54-202ENST00000373463 SCN11AQ9UI33 1791 aa28.6■■■□□ 2.17
TMEM54-202ENST00000373463 SLC27A3Q5K4L6 730 aa28.58■■■□□ 2.17
TMEM54-202ENST00000373463 DCAF5Q96JK2 942 aa28.58■■■□□ 2.17
TMEM54-202ENST00000373463 PDGFDQ9GZP0 370 aaPredicted RBP28.58■■■□□ 2.17
TMEM54-202ENST00000373463 PALLDQ8WX93 1383 aa28.58■■■□□ 2.17
TMEM54-202ENST00000373463 SRCAPQ6ZRS2 3230 aa28.58■■■□□ 2.17
TMEM54-202ENST00000373463 VIRMAQ69YN4 1812 aaKnown RBP28.57■■■□□ 2.16
TMEM54-202ENST00000373463 SLC15A2Q16348 729 aa28.57■■■□□ 2.16
TMEM54-202ENST00000373463 ZNF827Q17R98 1081 aa28.57■■■□□ 2.16
TMEM54-202ENST00000373463 MTHFSDQ2M296 383 aaKnown RBP28.56■■■□□ 2.16
TMEM54-202ENST00000373463 ADAMTS7Q9UKP4 1686 aa28.56■■■□□ 2.16
TMEM54-202ENST00000373463 TAF1LQ8IZX4 1826 aa28.55■■■□□ 2.16
TMEM54-202ENST00000373463 TUBGCP6Q96RT7 1819 aa28.55■■■□□ 2.16
TMEM54-202ENST00000373463 HSP90AB1P08238 724 aaKnown RBP28.55■■■□□ 2.16
TMEM54-202ENST00000373463 TMOD3Q9NYL9 352 aa28.55■■■□□ 2.16
TMEM54-202ENST00000373463 C1orf141Q5JVX7 400 aa28.54■■■□□ 2.16
TMEM54-202ENST00000373463 AKT1S1Q96B36 256 aa28.54■■■□□ 2.16
TMEM54-202ENST00000373463 RSPH6AQ9H0K4 717 aa28.54■■■□□ 2.16
TMEM54-202ENST00000373463 STK32BQ9NY57 414 aa28.54■■■□□ 2.16
TMEM54-202ENST00000373463 C5P01031 1676 aa28.54■■■□□ 2.16
TMEM54-202ENST00000373463 ERVV-2B6SEH9 535 aa28.53■■■□□ 2.16
TMEM54-202ENST00000373463 CCNL1Q9UK58 526 aaPredicted RBP28.53■■■□□ 2.16
TMEM54-202ENST00000373463 ASAP1Q9ULH1 1129 aa28.53■■■□□ 2.16
TMEM54-202ENST00000373463 RALBP1Q15311 655 aa28.52■■■□□ 2.16
TMEM54-202ENST00000373463 AKAP4Q5JQC9 854 aa28.52■■■□□ 2.16
TMEM54-202ENST00000373463 QSER1Q2KHR3 1735 aa28.51■■■□□ 2.15
TMEM54-202ENST00000373463 PHACTR3Q96KR7 559 aa28.5■■■□□ 2.15
TMEM54-202ENST00000373463 LGR6Q9HBX8 967 aa28.5■■■□□ 2.15
TMEM54-202ENST00000373463 ATG3Q9NT62 314 aa28.5■■■□□ 2.15
TMEM54-202ENST00000373463 PRKAR2BP31323 418 aa28.49■■■□□ 2.15
TMEM54-202ENST00000373463 SMARCC1Q92922 1105 aaPredicted RBP28.49■■■□□ 2.15
TMEM54-202ENST00000373463 NUDCQ9Y266 331 aa28.49■■■□□ 2.15
TMEM54-202ENST00000373463 MRC1P22897 1456 aa28.48■■■□□ 2.15
TMEM54-202ENST00000373463 U2AF1L5P0DN76 240 aaPredicted RBP28.48■■■□□ 2.15
TMEM54-202ENST00000373463 U2AF1Q01081 240 aaKnown RBP eCLIP28.48■■■□□ 2.15
TMEM54-202ENST00000373463 ZNF316A6NFI3 1004 aaPredicted RBP28.46■■■□□ 2.15
TMEM54-202ENST00000373463 CABP4P57796 275 aa28.46■■■□□ 2.15
TMEM54-202ENST00000373463 RNMTO43148 476 aaKnown RBP28.45■■■□□ 2.14
TMEM54-202ENST00000373463 NFATC2IPQ8NCF5 419 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms