RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
PGK1-201ENST00000373316 CNTROBQ8N137 903 aa12.83□□□□□ -0.36
PGK1-201ENST00000373316 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
PGK1-201ENST00000373316 TPM2P07951 284 aa12.82□□□□□ -0.36
PGK1-201ENST00000373316 LTV1Q96GA3 475 aaPredicted RBP12.82□□□□□ -0.36
PGK1-201ENST00000373316 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
PGK1-201ENST00000373316 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
PGK1-201ENST00000373316 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
PGK1-201ENST00000373316 GPS2Q13227 327 aa12.82□□□□□ -0.36
PGK1-201ENST00000373316 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
PGK1-201ENST00000373316 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
PGK1-201ENST00000373316 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
PGK1-201ENST00000373316 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
PGK1-201ENST00000373316 RILPL2Q969X0 211 aa12.81□□□□□ -0.36
PGK1-201ENST00000373316 POLKQ9UBT6 870 aa12.81□□□□□ -0.36
PGK1-201ENST00000373316 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
PGK1-201ENST00000373316 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
PGK1-201ENST00000373316 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
PGK1-201ENST00000373316 CPS1P31327 1500 aa12.81□□□□□ -0.36
PGK1-201ENST00000373316 CCDC173Q0VFZ6 552 aa12.8□□□□□ -0.36
PGK1-201ENST00000373316 CCDC47Q96A33 483 aaKnown RBP12.8□□□□□ -0.36
PGK1-201ENST00000373316 CCP110O43303 1012 aa12.8□□□□□ -0.36
PGK1-201ENST00000373316 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
PGK1-201ENST00000373316 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
PGK1-201ENST00000373316 ANKRD1Q15327 319 aa12.8□□□□□ -0.36
PGK1-201ENST00000373316 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
PGK1-201ENST00000373316 SMC3Q9UQE7 1217 aa12.8□□□□□ -0.36
PGK1-201ENST00000373316 FOXO3O43524 673 aa12.8□□□□□ -0.36
PGK1-201ENST00000373316 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
PGK1-201ENST00000373316 TRIM29Q14134 588 aa12.79□□□□□ -0.36
PGK1-201ENST00000373316 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
PGK1-201ENST00000373316 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
PGK1-201ENST00000373316 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
PGK1-201ENST00000373316 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
PGK1-201ENST00000373316 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
PGK1-201ENST00000373316 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
PGK1-201ENST00000373316 BCAR3O75815 825 aa12.79□□□□□ -0.36
PGK1-201ENST00000373316 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
PGK1-201ENST00000373316 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 BECN2A8MW95 431 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 FKBP5Q13451 457 aaPredicted RBP12.78□□□□□ -0.36
PGK1-201ENST00000373316 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 CCDC70Q6NSX1 233 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
PGK1-201ENST00000373316 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 GNAI2P04899 355 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
PGK1-201ENST00000373316 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
PGK1-201ENST00000373316 AMOTL1Q8IY63 956 aa12.78□□□□□ -0.36
PGK1-201ENST00000373316 PSME1Q06323 249 aa12.77□□□□□ -0.37
PGK1-201ENST00000373316 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.37
PGK1-201ENST00000373316 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
PGK1-201ENST00000373316 ANO2Q9NQ90 1003 aa12.77□□□□□ -0.37
PGK1-201ENST00000373316 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
PGK1-201ENST00000373316 TNNQ9UQP3 1299 aa12.77□□□□□ -0.37
PGK1-201ENST00000373316 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
PGK1-201ENST00000373316 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
PGK1-201ENST00000373316 ATP7BP35670 1465 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 NLRP6P59044 892 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 TRDNQ13061 729 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
PGK1-201ENST00000373316 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
PGK1-201ENST00000373316 BLMP54132 1417 aaPredicted RBP12.76□□□□□ -0.37
PGK1-201ENST00000373316 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
PGK1-201ENST00000373316 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 PANK1Q8TE04 598 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
PGK1-201ENST00000373316 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
PGK1-201ENST00000373316 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
PGK1-201ENST00000373316 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
PGK1-201ENST00000373316 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
PGK1-201ENST00000373316 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
PGK1-201ENST00000373316 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
PGK1-201ENST00000373316 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
PGK1-201ENST00000373316 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
PGK1-201ENST00000373316 DHX16O60231 1041 aaKnown RBP12.74□□□□□ -0.37
PGK1-201ENST00000373316 CCDC27Q2M243 656 aa12.74□□□□□ -0.37
PGK1-201ENST00000373316 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
PGK1-201ENST00000373316 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
PGK1-201ENST00000373316 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
PGK1-201ENST00000373316 ARHGAP23Q9P227 1491 aa12.73□□□□□ -0.37
PGK1-201ENST00000373316 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
PGK1-201ENST00000373316 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
PGK1-201ENST00000373316 TRAK2O60296 914 aa12.73□□□□□ -0.37
PGK1-201ENST00000373316 RAB11FIP3O75154 756 aa12.73□□□□□ -0.37
PGK1-201ENST00000373316 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
PGK1-201ENST00000373316 SETD1BQ9UPS6 1966 aaKnown RBP12.72□□□□□ -0.37
PGK1-201ENST00000373316 SLIT1O75093 1534 aa12.72□□□□□ -0.37
PGK1-201ENST00000373316 MED14O60244 1454 aa12.72□□□□□ -0.37
PGK1-201ENST00000373316 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
PGK1-201ENST00000373316 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
PGK1-201ENST00000373316 SAFBQ15424 915 aaKnown RBP eCLIP12.72□□□□□ -0.37
PGK1-201ENST00000373316 ZNF396Q96N95 335 aaPredicted RBP12.72□□□□□ -0.37
PGK1-201ENST00000373316 ACBD3Q9H3P7 528 aa12.72□□□□□ -0.37
PGK1-201ENST00000373316 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
PGK1-201ENST00000373316 AEBP2Q6ZN18 517 aaPredicted RBP12.72□□□□□ -0.37
PGK1-201ENST00000373316 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
PGK1-201ENST00000373316 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms