RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 FEZ1Q99689 392 aa22.36■■□□□ 1.17
MMP9-201ENST00000372330 ZBTB40Q9NUA8 1239 aa22.36■■□□□ 1.17
MMP9-201ENST00000372330 RBM42Q9BTD8 480 aaKnown RBP22.35■■□□□ 1.17
MMP9-201ENST00000372330 TRIM27P14373 513 aa22.35■■□□□ 1.17
MMP9-201ENST00000372330 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
MMP9-201ENST00000372330 SYCE3A1L190 88 aa22.34■■□□□ 1.17
MMP9-201ENST00000372330 TBC1D9Q6ZT07 1266 aa22.34■■□□□ 1.17
MMP9-201ENST00000372330 LNPKQ9C0E8 428 aa22.34■■□□□ 1.17
MMP9-201ENST00000372330 TMEM63CQ9P1W3 806 aa22.34■■□□□ 1.17
MMP9-201ENST00000372330 CABP1Q9NZU7 370 aa22.33■■□□□ 1.17
MMP9-201ENST00000372330 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
MMP9-201ENST00000372330 SMC4Q9NTJ3 1288 aa22.32■■□□□ 1.16
MMP9-201ENST00000372330 RBM27Q9P2N5 1060 aaKnown RBP22.32■■□□□ 1.16
MMP9-201ENST00000372330 SPTLC3Q9NUV7 552 aa22.32■■□□□ 1.16
MMP9-201ENST00000372330 DLC1Q96QB1 1528 aa22.32■■□□□ 1.16
MMP9-201ENST00000372330 FKBP5Q13451 457 aaPredicted RBP22.31■■□□□ 1.16
MMP9-201ENST00000372330 UVSSAQ2YD98 709 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 PNPLA6Q8IY17 1366 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 FAM184AQ8NB25 1140 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 GCC1Q96CN9 775 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 TSPY26PQ9H489 355 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 DIAPH3Q9NSV4 1193 aa22.31■■□□□ 1.16
MMP9-201ENST00000372330 WAPLQ7Z5K2 1190 aa22.3■■□□□ 1.16
MMP9-201ENST00000372330 SYAP1Q96A49 352 aaPredicted RBP22.3■■□□□ 1.16
MMP9-201ENST00000372330 TRIM35Q9UPQ4 493 aa22.3■■□□□ 1.16
MMP9-201ENST00000372330 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
MMP9-201ENST00000372330 IPO8O15397 1037 aaKnown RBP22.28■■□□□ 1.16
MMP9-201ENST00000372330 CDC45O75419 566 aa22.28■■□□□ 1.16
MMP9-201ENST00000372330 ANKRD7Q92527 254 aa22.28■■□□□ 1.16
MMP9-201ENST00000372330 TSC1Q92574 1164 aa22.28■■□□□ 1.16
MMP9-201ENST00000372330 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
MMP9-201ENST00000372330 SETD1AO15047 1707 aaKnown RBP22.28■■□□□ 1.16
MMP9-201ENST00000372330 GABPB1Q06547 395 aaPredicted RBP22.27■■□□□ 1.16
MMP9-201ENST00000372330 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
MMP9-201ENST00000372330 OGFRQ9NZT2 677 aa22.27■■□□□ 1.16
MMP9-201ENST00000372330 PHF14O94880 888 aa22.26■■□□□ 1.15
MMP9-201ENST00000372330 CHAF1AQ13111 956 aaPredicted RBP22.26■■□□□ 1.15
MMP9-201ENST00000372330 RNF214Q8ND24 703 aa22.26■■□□□ 1.15
MMP9-201ENST00000372330 KIF20BQ96Q89 1820 aa22.26■■□□□ 1.15
MMP9-201ENST00000372330 ATP7BP35670 1465 aa22.26■■□□□ 1.15
MMP9-201ENST00000372330 FBLN1P23142 703 aa22.26■■□□□ 1.15
MMP9-201ENST00000372330 JARID2Q92833 1246 aaPredicted RBP22.26■■□□□ 1.15
MMP9-201ENST00000372330 IL16Q14005 1332 aa22.26■■□□□ 1.15
MMP9-201ENST00000372330 TAF7LQ5H9L4 462 aa22.25■■□□□ 1.15
MMP9-201ENST00000372330 CDK11BP21127 795 aaKnown RBP22.25■■□□□ 1.15
MMP9-201ENST00000372330 ZNF771Q7L3S4 317 aaPredicted RBP22.25■■□□□ 1.15
MMP9-201ENST00000372330 AK9Q5TCS8 1911 aa22.24■■□□□ 1.15
MMP9-201ENST00000372330 SPDYE4A6NLX3 237 aa22.24■■□□□ 1.15
MMP9-201ENST00000372330 EXOSC9Q06265 439 aaKnown RBP22.24■■□□□ 1.15
MMP9-201ENST00000372330 TMEM57Q8N5G2 664 aa22.24■■□□□ 1.15
MMP9-201ENST00000372330 ST18O60284 1047 aa22.24■■□□□ 1.15
MMP9-201ENST00000372330 PKP1Q13835 747 aa22.24■■□□□ 1.15
MMP9-201ENST00000372330 CGNQ9P2M7 1197 aaKnown RBP22.24■■□□□ 1.15
MMP9-201ENST00000372330 SSH1Q8WYL5 1049 aa22.23■■□□□ 1.15
MMP9-201ENST00000372330 ANKRD45Q5TZF3 282 aa22.23■■□□□ 1.15
MMP9-201ENST00000372330 CTIFO43310 598 aaKnown RBP22.22■■□□□ 1.15
MMP9-201ENST00000372330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
MMP9-201ENST00000372330 NOB1Q9ULX3 412 aaKnown RBP22.22■■□□□ 1.15
MMP9-201ENST00000372330 ZDHHC9Q9Y397 364 aa22.22■■□□□ 1.15
MMP9-201ENST00000372330 FCHSD2O94868 740 aa22.22■■□□□ 1.15
MMP9-201ENST00000372330 NRXN3Q9Y4C0 1643 aa22.22■■□□□ 1.15
MMP9-201ENST00000372330 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
MMP9-201ENST00000372330 TNRQ92752 1358 aa22.21■■□□□ 1.15
MMP9-201ENST00000372330 SLC20A2Q08357 652 aa22.21■■□□□ 1.15
MMP9-201ENST00000372330 POLKQ9UBT6 870 aa22.2■■□□□ 1.15
MMP9-201ENST00000372330 CCDC66A2RUB6 948 aa22.2■■□□□ 1.14
MMP9-201ENST00000372330 U2AF2P26368 475 aaKnown RBP eCLIP22.2■■□□□ 1.14
MMP9-201ENST00000372330 SYCP1Q15431 976 aa22.19■■□□□ 1.14
MMP9-201ENST00000372330 TPM3P06753 285 aa22.19■■□□□ 1.14
MMP9-201ENST00000372330 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
MMP9-201ENST00000372330 NSFL1CQ9UNZ2 370 aaKnown RBP22.19■■□□□ 1.14
MMP9-201ENST00000372330 METP08581 1390 aa22.19■■□□□ 1.14
MMP9-201ENST00000372330 LRRC7Q96NW7 1537 aa22.18■■□□□ 1.14
MMP9-201ENST00000372330 WASLO00401 505 aaPredicted RBP22.18■■□□□ 1.14
MMP9-201ENST00000372330 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
MMP9-201ENST00000372330 CPSF1Q10570 1443 aaKnown RBP22.17■■□□□ 1.14
MMP9-201ENST00000372330 USP26Q9BXU7 913 aa22.17■■□□□ 1.14
MMP9-201ENST00000372330 FAM135BQ49AJ0 1406 aa22.16■■□□□ 1.14
MMP9-201ENST00000372330 EDC4Q6P2E9 1401 aaKnown RBP22.16■■□□□ 1.14
MMP9-201ENST00000372330 PPIP5K1Q6PFW1 1433 aa22.15■■□□□ 1.14
MMP9-201ENST00000372330 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
MMP9-201ENST00000372330 RIOK3O14730 519 aaKnown RBP22.15■■□□□ 1.14
MMP9-201ENST00000372330 PRKAR2BP31323 418 aa22.15■■□□□ 1.14
MMP9-201ENST00000372330 CEBPAP49715 358 aaPredicted RBP22.15■■□□□ 1.14
MMP9-201ENST00000372330 TTC12Q9H892 705 aaPredicted RBP22.15■■□□□ 1.14
MMP9-201ENST00000372330 UBR1Q8IWV7 1749 aa22.15■■□□□ 1.14
MMP9-201ENST00000372330 ALDH1L2Q3SY69 923 aa22.14■■□□□ 1.14
MMP9-201ENST00000372330 ZGPATQ8N5A5 531 aaKnown RBP22.14■■□□□ 1.14
MMP9-201ENST00000372330 ZNF830Q96NB3 372 aaPredicted RBP22.14■■□□□ 1.14
MMP9-201ENST00000372330 DNAJC2Q99543 621 aaKnown RBP22.14■■□□□ 1.13
MMP9-201ENST00000372330 FAM177BA6PVY3 158 aa22.13■■□□□ 1.13
MMP9-201ENST00000372330 TXNDC2Q86VQ3 553 aa22.13■■□□□ 1.13
MMP9-201ENST00000372330 KIAA1524Q8TCG1 905 aa22.13■■□□□ 1.13
MMP9-201ENST00000372330 ZRANB1Q9UGI0 708 aa22.13■■□□□ 1.13
MMP9-201ENST00000372330 ZBTB7CA1YPR0 619 aa22.13■■□□□ 1.13
MMP9-201ENST00000372330 ADCY5O95622 1261 aa22.13■■□□□ 1.13
MMP9-201ENST00000372330 FAM193AP78312 1265 aa22.12■■□□□ 1.13
MMP9-201ENST00000372330 TRHP20396 242 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms