RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 KIF24Q5T7B8 1368 aa23.67■■□□□ 1.38
GTF3C5-202ENST00000372097 NOL7Q9UMY1 257 aaKnown RBP23.67■■□□□ 1.38
GTF3C5-202ENST00000372097 AK9Q5TCS8 1911 aa23.67■■□□□ 1.38
GTF3C5-202ENST00000372097 C16orf71Q8IYS4 520 aaPredicted RBP23.67■■□□□ 1.38
GTF3C5-202ENST00000372097 C8orf58Q8NAV2 365 aa23.67■■□□□ 1.38
GTF3C5-202ENST00000372097 SETD1AO15047 1707 aaKnown RBP23.66■■□□□ 1.38
GTF3C5-202ENST00000372097 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
GTF3C5-202ENST00000372097 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
GTF3C5-202ENST00000372097 DLC1Q96QB1 1528 aa23.66■■□□□ 1.38
GTF3C5-202ENST00000372097 METP08581 1390 aa23.66■■□□□ 1.38
GTF3C5-202ENST00000372097 PRIM1P49642 420 aaKnown RBP23.65■■□□□ 1.38
GTF3C5-202ENST00000372097 KIF20BQ96Q89 1820 aa23.65■■□□□ 1.38
GTF3C5-202ENST00000372097 KNDC1Q76NI1 1749 aa23.65■■□□□ 1.38
GTF3C5-202ENST00000372097 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.64■■□□□ 1.38
GTF3C5-202ENST00000372097 ZNF500O60304 480 aaPredicted RBP23.64■■□□□ 1.37
GTF3C5-202ENST00000372097 GPT2Q8TD30 523 aa23.64■■□□□ 1.37
GTF3C5-202ENST00000372097 PRPF40AO75400 957 aaKnown RBP23.63■■□□□ 1.37
GTF3C5-202ENST00000372097 ZGPATQ8N5A5 531 aaKnown RBP23.63■■□□□ 1.37
GTF3C5-202ENST00000372097 ZDHHC9Q9Y397 364 aa23.63■■□□□ 1.37
GTF3C5-202ENST00000372097 WASLO00401 505 aaPredicted RBP23.62■■□□□ 1.37
GTF3C5-202ENST00000372097 OTUD7AQ8TE49 926 aaPredicted RBP23.62■■□□□ 1.37
GTF3C5-202ENST00000372097 NRXN3Q9Y4C0 1643 aa23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 ST18O60284 1047 aa23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 SDSP20132 328 aa23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 IL13P35225 146 aa23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 ANKRD44Q8N8A2 993 aa23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 NCKAP5LQ9HCH0 1330 aa23.61■■□□□ 1.37
GTF3C5-202ENST00000372097 ATP7BP35670 1465 aa23.6■■□□□ 1.37
GTF3C5-202ENST00000372097 KIF13AQ9H1H9 1805 aa23.6■■□□□ 1.37
GTF3C5-202ENST00000372097 ATP10DQ9P241 1426 aa23.6■■□□□ 1.37
GTF3C5-202ENST00000372097 RBM27Q9P2N5 1060 aaKnown RBP23.6■■□□□ 1.37
GTF3C5-202ENST00000372097 NME9Q86XW9 330 aa23.58■■□□□ 1.37
GTF3C5-202ENST00000372097 ZRANB1Q9UGI0 708 aa23.58■■□□□ 1.37
GTF3C5-202ENST00000372097 R3HCC1Q9Y3T6 440 aaKnown RBP23.58■■□□□ 1.37
GTF3C5-202ENST00000372097 LMOD3Q0VAK6 560 aa23.58■■□□□ 1.36
GTF3C5-202ENST00000372097 CASC1Q6TDU7 716 aa23.58■■□□□ 1.36
GTF3C5-202ENST00000372097 RPAP2Q8IXW5 612 aaPredicted RBP23.58■■□□□ 1.36
GTF3C5-202ENST00000372097 EMILIN1Q9Y6C2 1016 aa23.58■■□□□ 1.36
GTF3C5-202ENST00000372097 LRSAM1Q6UWE0 723 aa23.57■■□□□ 1.36
GTF3C5-202ENST00000372097 TMEM63CQ9P1W3 806 aa23.57■■□□□ 1.36
GTF3C5-202ENST00000372097 ZKSCAN5Q9Y2L8 839 aa23.57■■□□□ 1.36
GTF3C5-202ENST00000372097 MAP2P11137 1827 aaKnown RBP23.56■■□□□ 1.36
GTF3C5-202ENST00000372097 CEP85Q6P2H3 762 aa23.56■■□□□ 1.36
GTF3C5-202ENST00000372097 NUDT16Q96DE0 195 aaKnown RBP23.56■■□□□ 1.36
GTF3C5-202ENST00000372097 FAM83GA6ND36 823 aa23.55■■□□□ 1.36
GTF3C5-202ENST00000372097 REC8O95072 547 aa23.55■■□□□ 1.36
GTF3C5-202ENST00000372097 XPCQ01831 940 aaPredicted RBP23.55■■□□□ 1.36
GTF3C5-202ENST00000372097 RBM10P98175 930 aaKnown RBP23.54■■□□□ 1.36
GTF3C5-202ENST00000372097 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
GTF3C5-202ENST00000372097 MCM5P33992 734 aa23.54■■□□□ 1.36
GTF3C5-202ENST00000372097 SMARCA5O60264 1052 aaPredicted RBP23.53■■□□□ 1.36
GTF3C5-202ENST00000372097 HDGFP51858 240 aaKnown RBP23.53■■□□□ 1.36
GTF3C5-202ENST00000372097 CHAMP1Q96JM3 812 aa23.53■■□□□ 1.36
GTF3C5-202ENST00000372097 NSFL1CQ9UNZ2 370 aaKnown RBP23.53■■□□□ 1.36
GTF3C5-202ENST00000372097 TNRQ92752 1358 aa23.53■■□□□ 1.36
GTF3C5-202ENST00000372097 RGS12O14924 1447 aa23.53■■□□□ 1.36
GTF3C5-202ENST00000372097 SYCE3A1L190 88 aa23.52■■□□□ 1.36
GTF3C5-202ENST00000372097 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
GTF3C5-202ENST00000372097 CCDC61Q9Y6R9 512 aa23.52■■□□□ 1.36
GTF3C5-202ENST00000372097 CDK12Q9NYV4 1490 aaPredicted RBP23.51■■□□□ 1.35
GTF3C5-202ENST00000372097 ERC2O15083 957 aa23.51■■□□□ 1.35
GTF3C5-202ENST00000372097 DCTN1Q14203 1278 aa23.51■■□□□ 1.35
GTF3C5-202ENST00000372097 RTL1A6NKG5 1358 aa23.51■■□□□ 1.35
GTF3C5-202ENST00000372097 MAP7D2Q96T17 732 aa23.5■■□□□ 1.35
GTF3C5-202ENST00000372097 CSPP1Q1MSJ5 1256 aa23.5■■□□□ 1.35
GTF3C5-202ENST00000372097 FAM13BQ9NYF5 915 aa23.49■■□□□ 1.35
GTF3C5-202ENST00000372097 APBB1O00213 710 aa23.49■■□□□ 1.35
GTF3C5-202ENST00000372097 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
GTF3C5-202ENST00000372097 CCDC39Q9UFE4 941 aa23.49■■□□□ 1.35
GTF3C5-202ENST00000372097 UQCRHLA0A096LP55 91 aa23.48■■□□□ 1.35
GTF3C5-202ENST00000372097 MBD3O95983 291 aa23.48■■□□□ 1.35
GTF3C5-202ENST00000372097 UQCRHP07919 91 aa23.48■■□□□ 1.35
GTF3C5-202ENST00000372097 TMEM2Q9UHN6 1383 aa23.48■■□□□ 1.35
GTF3C5-202ENST00000372097 DLG5Q8TDM6 1919 aa23.48■■□□□ 1.35
GTF3C5-202ENST00000372097 COG3Q96JB2 828 aa23.48■■□□□ 1.35
GTF3C5-202ENST00000372097 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
GTF3C5-202ENST00000372097 TMX3Q96JJ7 454 aa23.47■■□□□ 1.35
GTF3C5-202ENST00000372097 MEIS3Q99687 375 aa23.47■■□□□ 1.35
GTF3C5-202ENST00000372097 MSH6P52701 1360 aa23.47■■□□□ 1.35
GTF3C5-202ENST00000372097 CPS1P31327 1500 aa23.46■■□□□ 1.35
GTF3C5-202ENST00000372097 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
GTF3C5-202ENST00000372097 OSBPL3Q9H4L5 887 aa23.46■■□□□ 1.35
GTF3C5-202ENST00000372097 TECPR2O15040 1411 aa23.46■■□□□ 1.35
GTF3C5-202ENST00000372097 NUTM2FA1L443 756 aa23.45■■□□□ 1.35
GTF3C5-202ENST00000372097 BRD1O95696 1058 aa23.45■■□□□ 1.35
GTF3C5-202ENST00000372097 KRT24Q2M2I5 525 aa23.45■■□□□ 1.35
GTF3C5-202ENST00000372097 SIRT1Q96EB6 747 aa23.45■■□□□ 1.35
GTF3C5-202ENST00000372097 ROBO2Q9HCK4 1378 aa23.45■■□□□ 1.34
GTF3C5-202ENST00000372097 NEK4P51957 841 aa23.45■■□□□ 1.34
GTF3C5-202ENST00000372097 HAP1P54257 671 aaPredicted RBP23.45■■□□□ 1.34
GTF3C5-202ENST00000372097 FOXD4L5Q5VV16 416 aaPredicted RBP23.44■■□□□ 1.34
GTF3C5-202ENST00000372097 FOXD4L4Q8WXT5 416 aaPredicted RBP23.44■■□□□ 1.34
GTF3C5-202ENST00000372097 CEBPAP49715 358 aaPredicted RBP23.44■■□□□ 1.34
GTF3C5-202ENST00000372097 PTPRCP08575 1304 aa23.43■■□□□ 1.34
GTF3C5-202ENST00000372097 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
GTF3C5-202ENST00000372097 DYNC1I1O14576 645 aa23.43■■□□□ 1.34
GTF3C5-202ENST00000372097 LTKP29376 864 aa23.43■■□□□ 1.34
GTF3C5-202ENST00000372097 MCM2P49736 904 aa23.43■■□□□ 1.34
GTF3C5-202ENST00000372097 PDE1AP54750 535 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms