RNA–Protein interactions for RNA: ENST00000371720.5

PMPCA-202, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 4

Gene PMPCA, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-202ENST00000371720 DDX10Q13206 875 aaKnown RBP28.84■■■□□ 2.21
PMPCA-202ENST00000371720 USHBP1Q8N6Y0 703 aa28.83■■■□□ 2.21
PMPCA-202ENST00000371720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.83■■■□□ 2.218e-7■■□□□ 13.3
PMPCA-202ENST00000371720 ZNF316A6NFI3 1004 aaPredicted RBP28.82■■■□□ 2.2
PMPCA-202ENST00000371720 FAM182BQ5T319 152 aa28.82■■■□□ 2.2
PMPCA-202ENST00000371720 ZCRB1Q8TBF4 217 aaKnown RBP28.81■■■□□ 2.2
PMPCA-202ENST00000371720 PCDH11XQ9BZA7 1347 aa28.8■■■□□ 2.2
PMPCA-202ENST00000371720 PCDH11YQ9BZA8 1340 aa28.8■■■□□ 2.2
PMPCA-202ENST00000371720 PPP2R1AP30153 589 aa28.8■■■□□ 2.2
PMPCA-202ENST00000371720 RALBP1Q15311 655 aa28.8■■■□□ 2.2
PMPCA-202ENST00000371720 DOT1LQ8TEK3 1739 aa28.8■■■□□ 2.2
PMPCA-202ENST00000371720 SF3B2Q13435 895 aaKnown RBP28.79■■■□□ 2.2
PMPCA-202ENST00000371720 DIAPH1O60610 1272 aaKnown RBP28.78■■■□□ 2.2
PMPCA-202ENST00000371720 RREB1Q92766 1687 aa28.77■■■□□ 2.2
PMPCA-202ENST00000371720 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
PMPCA-202ENST00000371720 BAG6P46379 1132 aa28.74■■■□□ 2.19
PMPCA-202ENST00000371720 TRIM37O94972 964 aa28.73■■■□□ 2.19
PMPCA-202ENST00000371720 BCL11BQ9C0K0 894 aaPredicted RBP28.73■■■□□ 2.19
PMPCA-202ENST00000371720 SPG7Q9UQ90 795 aa28.73■■■□□ 2.19
PMPCA-202ENST00000371720 BTAF1O14981 1849 aa28.73■■■□□ 2.19
PMPCA-202ENST00000371720 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
PMPCA-202ENST00000371720 AMOTQ4VCS5 1084 aa28.7■■■□□ 2.18
PMPCA-202ENST00000371720 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
PMPCA-202ENST00000371720 NKX1-1Q15270 411 aaPredicted RBP28.68■■■□□ 2.18
PMPCA-202ENST00000371720 SULT6B1Q6IMI4 303 aa28.68■■■□□ 2.18
PMPCA-202ENST00000371720 DDX54Q8TDD1 881 aaKnown RBP28.68■■■□□ 2.18
PMPCA-202ENST00000371720 MYBBP1AQ9BQG0 1328 aaKnown RBP28.68■■■□□ 2.18
PMPCA-202ENST00000371720 ITGB4P16144 1822 aa28.67■■■□□ 2.18
PMPCA-202ENST00000371720 CYP27B1O15528 508 aa28.67■■■□□ 2.18
PMPCA-202ENST00000371720 NUP188Q5SRE5 1749 aa28.66■■■□□ 2.18
PMPCA-202ENST00000371720 PLSCR1O15162 318 aa28.66■■■□□ 2.18
PMPCA-202ENST00000371720 AEBP1Q8IUX7 1158 aa28.66■■■□□ 2.18
PMPCA-202ENST00000371720 NUDCQ9Y266 331 aa28.65■■■□□ 2.18
PMPCA-202ENST00000371720 ADAMTS7Q9UKP4 1686 aa28.64■■■□□ 2.18
PMPCA-202ENST00000371720 PLEKHO1Q53GL0 409 aaPredicted RBP28.64■■■□□ 2.18
PMPCA-202ENST00000371720 IFNL2Q8IZJ0 200 aa28.64■■■□□ 2.18
PMPCA-202ENST00000371720 PRKRIP1Q9H875 184 aaPredicted RBP28.64■■■□□ 2.18
PMPCA-202ENST00000371720 APBA3O96018 575 aa28.63■■■□□ 2.17
PMPCA-202ENST00000371720 CAMKK2Q96RR4 588 aa28.63■■■□□ 2.17
PMPCA-202ENST00000371720 LY75O60449 1722 aa28.63■■■□□ 2.17
PMPCA-202ENST00000371720 PHKG2P15735 406 aa28.62■■■□□ 2.17
PMPCA-202ENST00000371720 DEFB132Q7Z7B7 95 aa28.62■■■□□ 2.17
PMPCA-202ENST00000371720 SCN11AQ9UI33 1791 aa28.61■■■□□ 2.17
PMPCA-202ENST00000371720 VIRMAQ69YN4 1812 aaKnown RBP28.61■■■□□ 2.17
PMPCA-202ENST00000371720 KAT6BQ8WYB5 2073 aa28.6■■■□□ 2.17
PMPCA-202ENST00000371720 HSP90AB1P08238 724 aaKnown RBP28.59■■■□□ 2.17
PMPCA-202ENST00000371720 KCNQ2O43526 872 aa28.57■■■□□ 2.16
PMPCA-202ENST00000371720 EN1Q05925 392 aaPredicted RBP28.57■■■□□ 2.16
PMPCA-202ENST00000371720 U2SURPO15042 1029 aaKnown RBP28.56■■■□□ 2.16
PMPCA-202ENST00000371720 HMOX1P09601 288 aa28.56■■■□□ 2.16
PMPCA-202ENST00000371720 ACSBG1Q96GR2 724 aa28.56■■■□□ 2.16
PMPCA-202ENST00000371720 PTF1AQ7RTS3 328 aa28.55■■■□□ 2.16
PMPCA-202ENST00000371720 RSPH6AQ9H0K4 717 aa28.55■■■□□ 2.16
PMPCA-202ENST00000371720 MRC1P22897 1456 aa28.54■■■□□ 2.16
PMPCA-202ENST00000371720 FCHSD2O94868 740 aa28.54■■■□□ 2.16
PMPCA-202ENST00000371720 DCAF5Q96JK2 942 aa28.54■■■□□ 2.16
PMPCA-202ENST00000371720 PAPPAQ13219 1627 aa28.54■■■□□ 2.16
PMPCA-202ENST00000371720 KDM6AO15550 1401 aaPredicted RBP28.53■■■□□ 2.16
PMPCA-202ENST00000371720 EZH2Q15910 746 aaKnown RBP28.53■■■□□ 2.16
PMPCA-202ENST00000371720 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
PMPCA-202ENST00000371720 PRIM1P49642 420 aaKnown RBP28.52■■■□□ 2.16
PMPCA-202ENST00000371720 AKAP4Q5JQC9 854 aa28.52■■■□□ 2.16
PMPCA-202ENST00000371720 ZNF831Q5JPB2 1677 aa28.51■■■□□ 2.16
PMPCA-202ENST00000371720 C1orf141Q5JVX7 400 aa28.51■■■□□ 2.15
PMPCA-202ENST00000371720 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
PMPCA-202ENST00000371720 U2AF1L5P0DN76 240 aaPredicted RBP28.49■■■□□ 2.15
PMPCA-202ENST00000371720 U2AF1Q01081 240 aaKnown RBP eCLIP28.49■■■□□ 2.15
PMPCA-202ENST00000371720 GAS2L2Q8NHY3 880 aa28.48■■■□□ 2.15
PMPCA-202ENST00000371720 SYTL4Q96C24 671 aaPredicted RBP28.47■■■□□ 2.15
PMPCA-202ENST00000371720 PRKAR2BP31323 418 aa28.46■■■□□ 2.15
PMPCA-202ENST00000371720 MTHFSDQ2M296 383 aaKnown RBP28.46■■■□□ 2.15
PMPCA-202ENST00000371720 CICQ96RK0 1608 aaPredicted RBP28.46■■■□□ 2.15
PMPCA-202ENST00000371720 SLC27A3Q5K4L6 730 aa28.45■■■□□ 2.14
PMPCA-202ENST00000371720 QSER1Q2KHR3 1735 aa28.45■■■□□ 2.14
PMPCA-202ENST00000371720 SIPA1L3O60292 1781 aaPredicted RBP28.45■■■□□ 2.14
PMPCA-202ENST00000371720 TXNRD1Q16881 649 aa28.44■■■□□ 2.14
PMPCA-202ENST00000371720 PROM2Q8N271 834 aa28.44■■■□□ 2.14
PMPCA-202ENST00000371720 PNNQ9H307 717 aaKnown RBP28.44■■■□□ 2.14
PMPCA-202ENST00000371720 MAP3K5Q99683 1374 aa28.44■■■□□ 2.14
PMPCA-202ENST00000371720 TAF1LQ8IZX4 1826 aa28.43■■■□□ 2.14
PMPCA-202ENST00000371720 HMGB2P26583 209 aaKnown RBP28.43■■■□□ 2.14
PMPCA-202ENST00000371720 C5P01031 1676 aa28.42■■■□□ 2.14
PMPCA-202ENST00000371720 SMARCC1Q92922 1105 aaPredicted RBP28.42■■■□□ 2.14
PMPCA-202ENST00000371720 TMOD3Q9NYL9 352 aa28.42■■■□□ 2.14
PMPCA-202ENST00000371720 DLG5Q8TDM6 1919 aa28.41■■■□□ 2.14
PMPCA-202ENST00000371720 PIGBQ92521 554 aa28.41■■■□□ 2.14
PMPCA-202ENST00000371720 PALLDQ8WX93 1383 aa28.4■■■□□ 2.14
PMPCA-202ENST00000371720 MPRIPQ6WCQ1 1025 aa28.4■■■□□ 2.14
PMPCA-202ENST00000371720 PLEKHF1Q96S99 279 aa28.4■■■□□ 2.14
PMPCA-202ENST00000371720 ANP32CO43423 234 aa28.39■■■□□ 2.14
PMPCA-202ENST00000371720 CEMIPQ8WUJ3 1361 aa28.38■■■□□ 2.13
PMPCA-202ENST00000371720 PHACTR3Q96KR7 559 aa28.38■■■□□ 2.13
PMPCA-202ENST00000371720 GNAT3A8MTJ3 354 aa28.37■■■□□ 2.13
PMPCA-202ENST00000371720 NBPF14Q5TI25 921 aa28.37■■■□□ 2.13
PMPCA-202ENST00000371720 UBR2Q8IWV8 1755 aa28.37■■■□□ 2.13
PMPCA-202ENST00000371720 RNMTO43148 476 aaKnown RBP28.36■■■□□ 2.13
PMPCA-202ENST00000371720 NEFMP07197 916 aa28.36■■■□□ 2.13
PMPCA-202ENST00000371720 HTATSF1O43719 755 aaKnown RBP28.35■■■□□ 2.13
PMPCA-202ENST00000371720 SLC52A2Q9HAB3 445 aa28.35■■■□□ 2.13
PMPCA-202ENST00000371720 CABP4P57796 275 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms