RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CCAR2Q8N163 923 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 FMNL2Q96PY5 1086 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 SRGAP3O43295 1099 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 HSP90AA2PQ14568 343 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 PLA2R1Q13018 1463 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 ERVK-7P63135 1459 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 UBR1Q8IWV7 1749 aa11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 CWC27Q6UX04 472 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-202ENST00000371122 RLBP1P12271 317 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 DMRT2Q9Y5R5 561 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 CPLX1O14810 134 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 ATF3P18847 181 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 CCDC30Q5VVM6 783 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 GNAI2P04899 355 aa11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 NASPP49321 788 aaPredicted RBP11.03□□□□□ -0.64
SMARCA1-202ENST00000371122 FERMT3Q86UX7 667 aa11.02□□□□□ -0.64
SMARCA1-202ENST00000371122 RUFY2Q8WXA3 655 aa11.02□□□□□ -0.64
SMARCA1-202ENST00000371122 TMEM131LA2VDJ0 1609 aa11.02□□□□□ -0.65
SMARCA1-202ENST00000371122 KAT6BQ8WYB5 2073 aa11.02□□□□□ -0.65
SMARCA1-202ENST00000371122 NFE2L2Q16236 605 aa11.02□□□□□ -0.65
SMARCA1-202ENST00000371122 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
SMARCA1-202ENST00000371122 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
SMARCA1-202ENST00000371122 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
SMARCA1-202ENST00000371122 SEC24BO95487 1268 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 MPRIPQ6WCQ1 1025 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 GDPD2Q9HCC8 539 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 GPRASP1Q5JY77 1395 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 GOLGA6L19H0YKK7 550 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 GNAI3P08754 354 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 AEBP1Q8IUX7 1158 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
SMARCA1-202ENST00000371122 FCHSD2O94868 740 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 HSP90AB2PQ58FF8 381 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 SPC24Q8NBT2 197 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
SMARCA1-202ENST00000371122 MCM4P33991 863 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 NUCB2P80303 420 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 RBM10P98175 930 aaKnown RBP11□□□□□ -0.65
SMARCA1-202ENST00000371122 SKOR2Q2VWA4 1001 aaPredicted RBP11□□□□□ -0.65
SMARCA1-202ENST00000371122 VPS53Q5VIR6 699 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 GAS2L2Q8NHY3 880 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 TESK2Q96S53 571 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 ADGRB3O60242 1522 aa11□□□□□ -0.65
SMARCA1-202ENST00000371122 PTMSP20962 102 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 NFXL1Q6ZNB6 911 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 RRP12Q5JTH9 1297 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 G3V3G9 751 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
SMARCA1-202ENST00000371122 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 GCC1Q96CN9 775 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 UGGT1Q9NYU2 1555 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 PHF14O94880 888 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 VPS37DQ86XT2 251 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
SMARCA1-202ENST00000371122 ERC2O15083 957 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 TAF7Q15545 349 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 AACSQ86V21 672 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 ATP6V1DQ9Y5K8 247 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 SLIT1O75093 1534 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 SETD1BQ9UPS6 1966 aaKnown RBP10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 K7ELQ4 463 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 DDX11Q96FC9 970 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 PPLO60437 1756 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 SSFA2P28290 1259 aa10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 FKBP4Q02790 459 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMARCA1-202ENST00000371122 CEP170BQ9Y4F5 1589 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 ARHGAP23Q9P227 1491 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 NUTM2BA6NNL0 878 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 NUTM2EB1AL46 878 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 TOM1L2Q6ZVM7 507 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 NUTM2AQ8IVF1 878 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 CCDC8Q9H0W5 538 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 KIF1BO60333 1816 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 SETD1AO15047 1707 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 BTBD11A6QL63 1104 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 RNF20Q5VTR2 975 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 PHACTR3Q96KR7 559 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 BOLA2Q9H3K6 86 aa10.96□□□□□ -0.65
SMARCA1-202ENST00000371122 MRE11P49959 708 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms