RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
GPC3-201ENST00000370818 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
GPC3-201ENST00000370818 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
GPC3-201ENST00000370818 ZBTB40Q9NUA8 1239 aa16.24■□□□□ 0.19
GPC3-201ENST00000370818 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
GPC3-201ENST00000370818 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
GPC3-201ENST00000370818 CRB1P82279 1406 aa16.23■□□□□ 0.19
GPC3-201ENST00000370818 PSME1Q06323 249 aa16.23■□□□□ 0.19
GPC3-201ENST00000370818 ORAI2Q96SN7 254 aa16.23■□□□□ 0.19
GPC3-201ENST00000370818 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
GPC3-201ENST00000370818 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
GPC3-201ENST00000370818 NFAT5O94916 1531 aa16.21■□□□□ 0.19
GPC3-201ENST00000370818 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.18
GPC3-201ENST00000370818 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
GPC3-201ENST00000370818 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
GPC3-201ENST00000370818 GAS2L2Q8NHY3 880 aa16.19■□□□□ 0.18
GPC3-201ENST00000370818 ABCC4O15439 1325 aa16.19■□□□□ 0.18
GPC3-201ENST00000370818 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
GPC3-201ENST00000370818 LTV1Q96GA3 475 aaPredicted RBP16.19■□□□□ 0.18
GPC3-201ENST00000370818 IP6K1Q92551 441 aa16.18■□□□□ 0.18
GPC3-201ENST00000370818 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
GPC3-201ENST00000370818 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
GPC3-201ENST00000370818 SLC4A3P48751 1232 aa16.17■□□□□ 0.18
GPC3-201ENST00000370818 XPCQ01831 940 aaPredicted RBP16.17■□□□□ 0.18
GPC3-201ENST00000370818 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
GPC3-201ENST00000370818 GLIPR1L2Q4G1C9 344 aa16.16■□□□□ 0.18
GPC3-201ENST00000370818 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
GPC3-201ENST00000370818 LTN1O94822 1766 aa16.16■□□□□ 0.18
GPC3-201ENST00000370818 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
GPC3-201ENST00000370818 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
GPC3-201ENST00000370818 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
GPC3-201ENST00000370818 USHBP1Q8N6Y0 703 aa16.15■□□□□ 0.18
GPC3-201ENST00000370818 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
GPC3-201ENST00000370818 C1orf167Q5SNV9 1468 aa16.15■□□□□ 0.18
GPC3-201ENST00000370818 API5Q9BZZ5 524 aaKnown RBP16.15■□□□□ 0.18
GPC3-201ENST00000370818 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
GPC3-201ENST00000370818 MSH6P52701 1360 aa16.14■□□□□ 0.17
GPC3-201ENST00000370818 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
GPC3-201ENST00000370818 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
GPC3-201ENST00000370818 GCP02774 474 aa16.13■□□□□ 0.17
GPC3-201ENST00000370818 NBPF6Q5VWK0 638 aa16.13■□□□□ 0.17
GPC3-201ENST00000370818 NBPF4Q96M43 638 aa16.13■□□□□ 0.17
GPC3-201ENST00000370818 RGS12O14924 1447 aa16.13■□□□□ 0.17
GPC3-201ENST00000370818 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
GPC3-201ENST00000370818 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
GPC3-201ENST00000370818 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
GPC3-201ENST00000370818 SLIT3O75094 1523 aa16.12■□□□□ 0.17
GPC3-201ENST00000370818 PHRF1Q9P1Y6 1649 aaKnown RBP16.12■□□□□ 0.17
GPC3-201ENST00000370818 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
GPC3-201ENST00000370818 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
GPC3-201ENST00000370818 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
GPC3-201ENST00000370818 CHMP4BQ9H444 224 aaKnown RBP16.11■□□□□ 0.17
GPC3-201ENST00000370818 C1orf115Q9H7X2 142 aa16.11■□□□□ 0.17
GPC3-201ENST00000370818 USP19O94966 1318 aa16.11■□□□□ 0.17
GPC3-201ENST00000370818 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
GPC3-201ENST00000370818 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
GPC3-201ENST00000370818 TMEM94Q12767 1356 aa16.11■□□□□ 0.17
GPC3-201ENST00000370818 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
GPC3-201ENST00000370818 SEC24BO95487 1268 aa16.09■□□□□ 0.17
GPC3-201ENST00000370818 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
GPC3-201ENST00000370818 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
GPC3-201ENST00000370818 SIRT2Q8IXJ6 389 aa16.09■□□□□ 0.17
GPC3-201ENST00000370818 RRAGDQ9NQL2 400 aaPredicted RBP16.09■□□□□ 0.17
GPC3-201ENST00000370818 LRRC59Q96AG4 307 aaKnown RBP16.09■□□□□ 0.17
GPC3-201ENST00000370818 STRCP1A6NGW2 1772 aa16.09■□□□□ 0.17
GPC3-201ENST00000370818 MST1RQ04912 1400 aa16.09■□□□□ 0.17
GPC3-201ENST00000370818 KIF1AQ12756 1690 aa16.08■□□□□ 0.17
GPC3-201ENST00000370818 PLEKHG5O94827 1062 aa16.08■□□□□ 0.17
GPC3-201ENST00000370818 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.17
GPC3-201ENST00000370818 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
GPC3-201ENST00000370818 PTPRCP08575 1304 aa16.08■□□□□ 0.16
GPC3-201ENST00000370818 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
GPC3-201ENST00000370818 HSPA2P54652 639 aa16.08■□□□□ 0.16
GPC3-201ENST00000370818 NUCB1Q02818 461 aa16.08■□□□□ 0.16
GPC3-201ENST00000370818 ATF3P18847 181 aa16.06■□□□□ 0.16
GPC3-201ENST00000370818 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
GPC3-201ENST00000370818 CEMIPQ8WUJ3 1361 aa16.06■□□□□ 0.16
GPC3-201ENST00000370818 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
GPC3-201ENST00000370818 DCCP43146 1447 aa16.06■□□□□ 0.16
GPC3-201ENST00000370818 NCAPD2Q15021 1401 aa16.06■□□□□ 0.16
GPC3-201ENST00000370818 NCOA3Q9Y6Q9 1424 aa16.06■□□□□ 0.16
GPC3-201ENST00000370818 G2E3Q7L622 706 aa16.05■□□□□ 0.16
GPC3-201ENST00000370818 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
GPC3-201ENST00000370818 RGPD2P0DJD1 1756 aa16.04■□□□□ 0.16
GPC3-201ENST00000370818 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
GPC3-201ENST00000370818 CHD1LQ86WJ1 897 aa16.04■□□□□ 0.16
GPC3-201ENST00000370818 GCC1Q96CN9 775 aa16.04■□□□□ 0.16
GPC3-201ENST00000370818 LNPKQ9C0E8 428 aa16.04■□□□□ 0.16
GPC3-201ENST00000370818 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
GPC3-201ENST00000370818 ALS2Q96Q42 1657 aa16.03■□□□□ 0.16
GPC3-201ENST00000370818 MED1Q15648 1581 aaPredicted RBP16.03■□□□□ 0.16
GPC3-201ENST00000370818 LGR6Q9HBX8 967 aa16.02■□□□□ 0.16
GPC3-201ENST00000370818 ATP10DQ9P241 1426 aa16.02■□□□□ 0.15
GPC3-201ENST00000370818 F6X3S4 739 aa16.01■□□□□ 0.15
GPC3-201ENST00000370818 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
GPC3-201ENST00000370818 SOS1Q07889 1333 aaPredicted RBP16■□□□□ 0.15
GPC3-201ENST00000370818 ANKRD45Q5TZF3 282 aa16■□□□□ 0.15
GPC3-201ENST00000370818 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
GPC3-201ENST00000370818 MEIS3Q99687 375 aa16■□□□□ 0.15
GPC3-201ENST00000370818 STK31Q9BXU1 1019 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms