RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
UBE3D-203ENST00000369747 CCDC136Q96JN2 1154 aa22.53■■□□□ 1.2
UBE3D-203ENST00000369747 NRAPQ86VF7 1730 aa22.53■■□□□ 1.2
UBE3D-203ENST00000369747 CRB1P82279 1406 aa22.52■■□□□ 1.2
UBE3D-203ENST00000369747 CARD10Q9BWT7 1032 aa22.52■■□□□ 1.2
UBE3D-203ENST00000369747 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
UBE3D-203ENST00000369747 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
UBE3D-203ENST00000369747 PLIN1O60240 522 aa22.51■■□□□ 1.19
UBE3D-203ENST00000369747 MTHFSDQ2M296 383 aaKnown RBP22.51■■□□□ 1.19
UBE3D-203ENST00000369747 BCL9LQ86UU0 1499 aa22.5■■□□□ 1.19
UBE3D-203ENST00000369747 E9PSI1 815 aa22.5■■□□□ 1.19
UBE3D-203ENST00000369747 RIPK4P57078 832 aa22.5■■□□□ 1.19
UBE3D-203ENST00000369747 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
UBE3D-203ENST00000369747 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
UBE3D-203ENST00000369747 FNBP4Q8N3X1 1017 aaPredicted RBP22.5■■□□□ 1.19
UBE3D-203ENST00000369747 MEGF6O75095 1541 aa22.49■■□□□ 1.19
UBE3D-203ENST00000369747 RAPGEF4Q8WZA2 1011 aa22.49■■□□□ 1.19
UBE3D-203ENST00000369747 UNC5CLQ8IV45 518 aa22.48■■□□□ 1.19
UBE3D-203ENST00000369747 DLG5Q8TDM6 1919 aa22.47■■□□□ 1.19
UBE3D-203ENST00000369747 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
UBE3D-203ENST00000369747 TRIM35Q9UPQ4 493 aa22.47■■□□□ 1.19
UBE3D-203ENST00000369747 RBM19Q9Y4C8 960 aaKnown RBP22.46■■□□□ 1.19
UBE3D-203ENST00000369747 USP21Q9UK80 565 aa22.45■■□□□ 1.18
UBE3D-203ENST00000369747 AFF2P51816 1311 aa22.44■■□□□ 1.18
UBE3D-203ENST00000369747 TATP17735 454 aaPredicted RBP22.44■■□□□ 1.18
UBE3D-203ENST00000369747 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
UBE3D-203ENST00000369747 SPATA31A1Q5TZJ5 1347 aa22.43■■□□□ 1.18
UBE3D-203ENST00000369747 CCDC9Q9Y3X0 531 aaKnown RBP22.43■■□□□ 1.18
UBE3D-203ENST00000369747 IL2RBP14784 551 aa22.43■■□□□ 1.18
UBE3D-203ENST00000369747 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
UBE3D-203ENST00000369747 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
UBE3D-203ENST00000369747 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
UBE3D-203ENST00000369747 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
UBE3D-203ENST00000369747 PLEKHO1Q53GL0 409 aaPredicted RBP22.42■■□□□ 1.18
UBE3D-203ENST00000369747 DCTN1Q14203 1278 aa22.41■■□□□ 1.18
UBE3D-203ENST00000369747 AMOTQ4VCS5 1084 aa22.41■■□□□ 1.18
UBE3D-203ENST00000369747 CRBNQ96SW2 442 aa22.41■■□□□ 1.18
UBE3D-203ENST00000369747 THUMPD2Q9BTF0 503 aaKnown RBP22.41■■□□□ 1.18
UBE3D-203ENST00000369747 OVOS2A0A0G2JMS6 1433 aa22.41■■□□□ 1.18
UBE3D-203ENST00000369747 C20orf194Q5TEA3 1177 aa22.41■■□□□ 1.18
UBE3D-203ENST00000369747 VPS72Q15906 364 aa22.4■■□□□ 1.18
UBE3D-203ENST00000369747 ZNF530Q6P9A1 599 aaPredicted RBP22.4■■□□□ 1.18
UBE3D-203ENST00000369747 PARP4Q9UKK3 1724 aaKnown RBP22.4■■□□□ 1.18
UBE3D-203ENST00000369747 WDR63Q8IWG1 891 aa22.39■■□□□ 1.18
UBE3D-203ENST00000369747 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.39■■□□□ 1.17
UBE3D-203ENST00000369747 MCM10Q7L590 875 aa22.39■■□□□ 1.17
UBE3D-203ENST00000369747 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
UBE3D-203ENST00000369747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.38■■□□□ 1.17
UBE3D-203ENST00000369747 PKD1L3Q7Z443 1732 aa22.38■■□□□ 1.17
UBE3D-203ENST00000369747 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
UBE3D-203ENST00000369747 SPG7Q9UQ90 795 aa22.37■■□□□ 1.17
UBE3D-203ENST00000369747 MAP3K5Q99683 1374 aa22.37■■□□□ 1.17
UBE3D-203ENST00000369747 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
UBE3D-203ENST00000369747 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.36■■□□□ 1.17
UBE3D-203ENST00000369747 ZCRB1Q8TBF4 217 aaKnown RBP22.36■■□□□ 1.17
UBE3D-203ENST00000369747 CYP27B1O15528 508 aa22.35■■□□□ 1.17
UBE3D-203ENST00000369747 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
UBE3D-203ENST00000369747 PLEKHG2Q9H7P9 1386 aa22.35■■□□□ 1.17
UBE3D-203ENST00000369747 AKAP4Q5JQC9 854 aa22.35■■□□□ 1.17
UBE3D-203ENST00000369747 C1orf141Q5JVX7 400 aa22.35■■□□□ 1.17
UBE3D-203ENST00000369747 RTF1Q92541 710 aaKnown RBP22.35■■□□□ 1.17
UBE3D-203ENST00000369747 WNK3Q9BYP7 1800 aa22.35■■□□□ 1.17
UBE3D-203ENST00000369747 MPRIPQ6WCQ1 1025 aa22.34■■□□□ 1.17
UBE3D-203ENST00000369747 IL17REQ8NFR9 667 aa22.34■■□□□ 1.17
UBE3D-203ENST00000369747 BCAR3O75815 825 aa22.33■■□□□ 1.17
UBE3D-203ENST00000369747 FAM98CQ17RN3 349 aaKnown RBP22.33■■□□□ 1.17
UBE3D-203ENST00000369747 SHANK3Q9BYB0 1731 aa22.33■■□□□ 1.16
UBE3D-203ENST00000369747 PHKG2P15735 406 aa22.33■■□□□ 1.16
UBE3D-203ENST00000369747 LGR6Q9HBX8 967 aa22.33■■□□□ 1.16
UBE3D-203ENST00000369747 BARGINQ6ZT62 677 aa22.32■■□□□ 1.16
UBE3D-203ENST00000369747 DDX54Q8TDD1 881 aaKnown RBP22.32■■□□□ 1.16
UBE3D-203ENST00000369747 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
UBE3D-203ENST00000369747 IFNL2Q8IZJ0 200 aa22.31■■□□□ 1.16
UBE3D-203ENST00000369747 ATRNO75882 1429 aa22.31■■□□□ 1.16
UBE3D-203ENST00000369747 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
UBE3D-203ENST00000369747 TRPC5Q9UL62 973 aaPredicted RBP22.31■■□□□ 1.16
UBE3D-203ENST00000369747 PCDH11XQ9BZA7 1347 aa22.31■■□□□ 1.16
UBE3D-203ENST00000369747 PCDH11YQ9BZA8 1340 aa22.31■■□□□ 1.16
UBE3D-203ENST00000369747 QTRT2Q9H974 415 aaKnown RBP22.3■■□□□ 1.16
UBE3D-203ENST00000369747 GLI3P10071 1580 aa22.3■■□□□ 1.16
UBE3D-203ENST00000369747 LAS1LQ9Y4W2 734 aaKnown RBP22.29■■□□□ 1.16
UBE3D-203ENST00000369747 CDCA7Q9BWT1 371 aaPredicted RBP22.29■■□□□ 1.16
UBE3D-203ENST00000369747 CEMIPQ8WUJ3 1361 aa22.28■■□□□ 1.16
UBE3D-203ENST00000369747 EXOC5O00471 708 aa22.28■■□□□ 1.16
UBE3D-203ENST00000369747 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
UBE3D-203ENST00000369747 VIRMAQ69YN4 1812 aaKnown RBP22.28■■□□□ 1.16
UBE3D-203ENST00000369747 KDM6AO15550 1401 aaPredicted RBP22.28■■□□□ 1.16
UBE3D-203ENST00000369747 IL16Q14005 1332 aa22.28■■□□□ 1.16
UBE3D-203ENST00000369747 RNMTO43148 476 aaKnown RBP22.27■■□□□ 1.16
UBE3D-203ENST00000369747 DDB1Q16531 1140 aa22.27■■□□□ 1.16
UBE3D-203ENST00000369747 MYH16Q9H6N6 1097 aa22.27■■□□□ 1.16
UBE3D-203ENST00000369747 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
UBE3D-203ENST00000369747 LRRC37A3O60309 1634 aa22.26■■□□□ 1.15
UBE3D-203ENST00000369747 CALD1Q05682 793 aaKnown RBP22.26■■□□□ 1.15
UBE3D-203ENST00000369747 MIS18AQ9NYP9 233 aa22.25■■□□□ 1.15
UBE3D-203ENST00000369747 ADAMTS7Q9UKP4 1686 aa22.25■■□□□ 1.15
UBE3D-203ENST00000369747 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
UBE3D-203ENST00000369747 ILDR1Q86SU0 546 aaPredicted RBP22.25■■□□□ 1.15
UBE3D-203ENST00000369747 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
UBE3D-203ENST00000369747 IFT57Q9NWB7 429 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms