RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 VASPP50552 380 aaPredicted RBP6.69□□□□□ -1.34
UBE3D-202ENST00000369746 STAC3Q96MF2 364 aa6.69□□□□□ -1.34
UBE3D-202ENST00000369746 RRP9O43818 475 aaKnown RBP6.69□□□□□ -1.34
UBE3D-202ENST00000369746 PTMAP06454 111 aaKnown RBP6.69□□□□□ -1.34
UBE3D-202ENST00000369746 EXOC8Q8IYI6 725 aa6.69□□□□□ -1.34
UBE3D-202ENST00000369746 RIPOR2Q9Y4F9 1068 aa6.69□□□□□ -1.34
UBE3D-202ENST00000369746 METP08581 1390 aa6.69□□□□□ -1.34
UBE3D-202ENST00000369746 TOPAZ1Q8N9V7 1692 aa6.69□□□□□ -1.34
UBE3D-202ENST00000369746 KIAA1210Q9ULL0 1709 aa6.68□□□□□ -1.34
UBE3D-202ENST00000369746 MAPK8IP2Q13387 824 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-202ENST00000369746 QRICH2Q9H0J4 1663 aa6.68□□□□□ -1.34
UBE3D-202ENST00000369746 GPBP1L1Q9HC44 474 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-202ENST00000369746 IRF5Q13568 498 aa6.68□□□□□ -1.34
UBE3D-202ENST00000369746 NOL8Q76FK4 1167 aaKnown RBP6.68□□□□□ -1.34
UBE3D-202ENST00000369746 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-202ENST00000369746 CFAP65Q6ZU64 1925 aaKnown RBP6.68□□□□□ -1.34
UBE3D-202ENST00000369746 SPATA31A1Q5TZJ5 1347 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 WASHC2AQ641Q2 1341 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 DEFB132Q7Z7B7 95 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 AKAP12Q02952 1782 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 ECM2O94769 699 aaPredicted RBP6.67□□□□□ -1.34
UBE3D-202ENST00000369746 HSP90AB4PQ58FF6 505 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 TRAIPQ9BWF2 469 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 PIK3C2AO00443 1686 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
UBE3D-202ENST00000369746 CENPJQ9HC77 1338 aaPredicted RBP6.66□□□□□ -1.34
UBE3D-202ENST00000369746 PTGER2P43116 358 aa6.66□□□□□ -1.34
UBE3D-202ENST00000369746 FSTL1Q12841 308 aa6.66□□□□□ -1.34
UBE3D-202ENST00000369746 CDCA8Q53HL2 280 aa6.66□□□□□ -1.34
UBE3D-202ENST00000369746 ATP1B4Q9UN42 357 aaPredicted RBP6.66□□□□□ -1.34
UBE3D-202ENST00000369746 SOX12O15370 315 aa6.66□□□□□ -1.34
UBE3D-202ENST00000369746 R3HDM1Q15032 1099 aaKnown RBP6.66□□□□□ -1.34
UBE3D-202ENST00000369746 MIER1Q8N108 512 aa6.66□□□□□ -1.34
UBE3D-202ENST00000369746 ROBO2Q9HCK4 1378 aa6.66□□□□□ -1.34
UBE3D-202ENST00000369746 TNRC6CQ9HCJ0 1690 aaKnown RBP6.65□□□□□ -1.34
UBE3D-202ENST00000369746 ZC3H4Q9UPT8 1303 aaKnown RBP6.65□□□□□ -1.34
UBE3D-202ENST00000369746 FBXW7Q969H0 707 aa6.65□□□□□ -1.35
UBE3D-202ENST00000369746 PLEKHG2Q9H7P9 1386 aa6.65□□□□□ -1.35
UBE3D-202ENST00000369746 ADAMTS2O95450 1211 aa6.64□□□□□ -1.35
UBE3D-202ENST00000369746 CHGAP10645 457 aaKnown RBP6.64□□□□□ -1.35
UBE3D-202ENST00000369746 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
UBE3D-202ENST00000369746 FAM43AQ8N2R8 423 aa6.64□□□□□ -1.35
UBE3D-202ENST00000369746 RETREG2Q8NC44 543 aa6.64□□□□□ -1.35
UBE3D-202ENST00000369746 UNCXA6NJT0 531 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 NEFMP07197 916 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 RGS19P49795 217 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 RBM46Q8TBY0 533 aaKnown RBP6.63□□□□□ -1.35
UBE3D-202ENST00000369746 FAM208AQ9UK61 1670 aaKnown RBP6.63□□□□□ -1.35
UBE3D-202ENST00000369746 SSH2Q76I76 1423 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 NSD3Q9BZ95 1437 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 SLIT3O75094 1523 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 MARCH6O60337 910 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 SPINK5Q9NQ38 1064 aaPredicted RBP6.63□□□□□ -1.35
UBE3D-202ENST00000369746 CLUAP1Q96AJ1 413 aa6.63□□□□□ -1.35
UBE3D-202ENST00000369746 CANXP27824 592 aaKnown RBP6.62□□□□□ -1.35
UBE3D-202ENST00000369746 EN1Q05925 392 aaPredicted RBP6.62□□□□□ -1.35
UBE3D-202ENST00000369746 KIF13BQ9NQT8 1826 aa6.62□□□□□ -1.35
UBE3D-202ENST00000369746 EZH2Q15910 746 aaKnown RBP6.62□□□□□ -1.35
UBE3D-202ENST00000369746 SPTY2D1Q68D10 685 aaPredicted RBP6.62□□□□□ -1.35
UBE3D-202ENST00000369746 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
UBE3D-202ENST00000369746 CALD1Q05682 793 aaKnown RBP6.61□□□□□ -1.35
UBE3D-202ENST00000369746 POTEHQ6S545 545 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 EVI5LQ96CN4 794 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 STK24Q9Y6E0 443 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 ZNF831Q5JPB2 1677 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 ZC3H15Q8WU90 426 aaKnown RBP6.61□□□□□ -1.35
UBE3D-202ENST00000369746 SYT17Q9BSW7 474 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 STK32BQ9NY57 414 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 PIK3C2GO75747 1445 aa6.61□□□□□ -1.35
UBE3D-202ENST00000369746 KRT28Q7Z3Y7 464 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 USP19O94966 1318 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 ATP10DQ9P241 1426 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 APBB1IPQ7Z5R6 666 aaPredicted RBP6.6□□□□□ -1.35
UBE3D-202ENST00000369746 DNAJC5GQ8N7S2 189 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 WDR70Q9NW82 654 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 THSD7BQ9C0I4 1608 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 LY75O60449 1722 aa6.6□□□□□ -1.35
UBE3D-202ENST00000369746 GPRASP1Q5JY77 1395 aa6.59□□□□□ -1.35
UBE3D-202ENST00000369746 PSDA5PKW4 1024 aaPredicted RBP6.59□□□□□ -1.35
UBE3D-202ENST00000369746 RBM27Q9P2N5 1060 aaKnown RBP6.59□□□□□ -1.35
UBE3D-202ENST00000369746 CD2APQ9Y5K6 639 aa6.59□□□□□ -1.35
UBE3D-202ENST00000369746 CRB1P82279 1406 aa6.59□□□□□ -1.35
UBE3D-202ENST00000369746 APBA3O96018 575 aa6.59□□□□□ -1.35
UBE3D-202ENST00000369746 SLC27A3Q5K4L6 730 aa6.59□□□□□ -1.35
UBE3D-202ENST00000369746 PLCD3Q8N3E9 789 aa6.59□□□□□ -1.35
UBE3D-202ENST00000369746 POLR3AO14802 1390 aaPredicted RBP6.59□□□□□ -1.36
UBE3D-202ENST00000369746 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
UBE3D-202ENST00000369746 KIAA0232Q92628 1395 aa6.58□□□□□ -1.36
UBE3D-202ENST00000369746 CCDC7Q96M83 1385 aa6.58□□□□□ -1.36
UBE3D-202ENST00000369746 COL18A1P39060 1754 aa6.58□□□□□ -1.36
UBE3D-202ENST00000369746 FOSBP53539 338 aa6.58□□□□□ -1.36
UBE3D-202ENST00000369746 KLRG1Q96E93 195 aa6.58□□□□□ -1.36
UBE3D-202ENST00000369746 ZNF662Q6ZS27 426 aa6.57□□□□□ -1.36
UBE3D-202ENST00000369746 PHF8Q9UPP1 1060 aa6.57□□□□□ -1.36
UBE3D-202ENST00000369746 CACNB1Q02641 598 aaPredicted RBP6.57□□□□□ -1.36
UBE3D-202ENST00000369746 SLC15A2Q16348 729 aa6.57□□□□□ -1.36
UBE3D-202ENST00000369746 FLAD1Q8NFF5 587 aa6.57□□□□□ -1.36
UBE3D-202ENST00000369746 ORAI2Q96SN7 254 aa6.57□□□□□ -1.36
UBE3D-202ENST00000369746 TPD52L2O43399 206 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms