RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 LMBRD1Q9NUN5 540 aa15.51■□□□□ 0.07
LINC01561-201ENST00000369071 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
LINC01561-201ENST00000369071 A2ML1A8K2U0 1454 aa15.5■□□□□ 0.07
LINC01561-201ENST00000369071 SDSP20132 328 aa15.5■□□□□ 0.07
LINC01561-201ENST00000369071 RRS1Q15050 365 aaKnown RBP15.5■□□□□ 0.07
LINC01561-201ENST00000369071 AK9Q5TCS8 1911 aa15.5■□□□□ 0.07
LINC01561-201ENST00000369071 MCTP1Q6DN14 999 aa15.49■□□□□ 0.07
LINC01561-201ENST00000369071 COG3Q96JB2 828 aa15.49■□□□□ 0.07
LINC01561-201ENST00000369071 MON2Q7Z3U7 1717 aa15.49■□□□□ 0.07
LINC01561-201ENST00000369071 CWC22Q9HCG8 908 aaKnown RBP15.49■□□□□ 0.07
LINC01561-201ENST00000369071 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
LINC01561-201ENST00000369071 PKP1Q13835 747 aa15.48■□□□□ 0.07
LINC01561-201ENST00000369071 NRKQ7Z2Y5 1582 aa15.48■□□□□ 0.07
LINC01561-201ENST00000369071 CHL1O00533 1208 aa15.48■□□□□ 0.07
LINC01561-201ENST00000369071 RRP9O43818 475 aaKnown RBP15.48■□□□□ 0.07
LINC01561-201ENST00000369071 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
LINC01561-201ENST00000369071 C3P01024 1663 aa15.47■□□□□ 0.07
LINC01561-201ENST00000369071 MSH6P52701 1360 aa15.47■□□□□ 0.07
LINC01561-201ENST00000369071 KIAA0232Q92628 1395 aa15.47■□□□□ 0.07
LINC01561-201ENST00000369071 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
LINC01561-201ENST00000369071 ZSCAN23Q3MJ62 389 aa15.47■□□□□ 0.07
LINC01561-201ENST00000369071 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
LINC01561-201ENST00000369071 ZSCAN30Q86W11 494 aa15.46■□□□□ 0.07
LINC01561-201ENST00000369071 NUDT16Q96DE0 195 aaKnown RBP15.46■□□□□ 0.07
LINC01561-201ENST00000369071 CAVIN1Q6NZI2 390 aaKnown RBP15.46■□□□□ 0.07
LINC01561-201ENST00000369071 CASC1Q6TDU7 716 aa15.46■□□□□ 0.07
LINC01561-201ENST00000369071 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
LINC01561-201ENST00000369071 PTPRCP08575 1304 aa15.46■□□□□ 0.06
LINC01561-201ENST00000369071 NRXN3Q9Y4C0 1643 aa15.45■□□□□ 0.06
LINC01561-201ENST00000369071 ST18O60284 1047 aa15.45■□□□□ 0.06
LINC01561-201ENST00000369071 HSP90AA2PQ14568 343 aaPredicted RBP15.45■□□□□ 0.06
LINC01561-201ENST00000369071 AEBP1Q8IUX7 1158 aa15.45■□□□□ 0.06
LINC01561-201ENST00000369071 ZGPATQ8N5A5 531 aaKnown RBP15.45■□□□□ 0.06
LINC01561-201ENST00000369071 ANP32BQ92688 251 aaKnown RBP15.45■□□□□ 0.06
LINC01561-201ENST00000369071 MEIS3Q99687 375 aa15.45■□□□□ 0.06
LINC01561-201ENST00000369071 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
LINC01561-201ENST00000369071 AKAP12Q02952 1782 aa15.45■□□□□ 0.06
LINC01561-201ENST00000369071 REC8O95072 547 aa15.44■□□□□ 0.06
LINC01561-201ENST00000369071 TPM2P07951 284 aa15.44■□□□□ 0.06
LINC01561-201ENST00000369071 CCDC61Q9Y6R9 512 aa15.44■□□□□ 0.06
LINC01561-201ENST00000369071 SPATA31D1Q6ZQQ2 1576 aa15.44■□□□□ 0.06
LINC01561-201ENST00000369071 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
LINC01561-201ENST00000369071 METP08581 1390 aa15.43■□□□□ 0.06
LINC01561-201ENST00000369071 ERC2O15083 957 aa15.43■□□□□ 0.06
LINC01561-201ENST00000369071 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
LINC01561-201ENST00000369071 SULT6B1Q6IMI4 303 aa15.43■□□□□ 0.06
LINC01561-201ENST00000369071 GPT2Q8TD30 523 aa15.43■□□□□ 0.06
LINC01561-201ENST00000369071 RBSNQ9H1K0 784 aa15.43■□□□□ 0.06
LINC01561-201ENST00000369071 OSBPL3Q9H4L5 887 aa15.43■□□□□ 0.06
LINC01561-201ENST00000369071 APBB1O00213 710 aa15.42■□□□□ 0.06
LINC01561-201ENST00000369071 HS1BP3Q53T59 392 aa15.42■□□□□ 0.06
LINC01561-201ENST00000369071 MCM10Q7L590 875 aa15.42■□□□□ 0.06
LINC01561-201ENST00000369071 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
LINC01561-201ENST00000369071 PDLIM2Q96JY6 352 aa15.42■□□□□ 0.06
LINC01561-201ENST00000369071 ITSN1Q15811 1721 aa15.41■□□□□ 0.06
LINC01561-201ENST00000369071 OFD1O75665 1012 aa15.41■□□□□ 0.06
LINC01561-201ENST00000369071 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
LINC01561-201ENST00000369071 CRB1P82279 1406 aa15.41■□□□□ 0.06
LINC01561-201ENST00000369071 PRIM1P49642 420 aaKnown RBP15.41■□□□□ 0.06
LINC01561-201ENST00000369071 SIRT1Q96EB6 747 aa15.41■□□□□ 0.06
LINC01561-201ENST00000369071 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
LINC01561-201ENST00000369071 PDE1AP54750 535 aa15.4■□□□□ 0.06
LINC01561-201ENST00000369071 GLIPR1L2Q4G1C9 344 aa15.4■□□□□ 0.06
LINC01561-201ENST00000369071 TECPR2O15040 1411 aa15.39■□□□□ 0.05
LINC01561-201ENST00000369071 PRR36Q9H6K5 1346 aa15.39■□□□□ 0.05
LINC01561-201ENST00000369071 HMMRO75330 724 aa15.39■□□□□ 0.05
LINC01561-201ENST00000369071 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
LINC01561-201ENST00000369071 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
LINC01561-201ENST00000369071 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
LINC01561-201ENST00000369071 RGPD1P0DJD0 1748 aa15.39■□□□□ 0.05
LINC01561-201ENST00000369071 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
LINC01561-201ENST00000369071 AGLP35573 1532 aa15.38■□□□□ 0.05
LINC01561-201ENST00000369071 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
LINC01561-201ENST00000369071 TMEM63CQ9P1W3 806 aa15.38■□□□□ 0.05
LINC01561-201ENST00000369071 NOL7Q9UMY1 257 aaKnown RBP15.38■□□□□ 0.05
LINC01561-201ENST00000369071 LRSAM1Q6UWE0 723 aa15.37■□□□□ 0.05
LINC01561-201ENST00000369071 CHAMP1Q96JM3 812 aa15.37■□□□□ 0.05
LINC01561-201ENST00000369071 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.37■□□□□ 0.05
LINC01561-201ENST00000369071 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
LINC01561-201ENST00000369071 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.36■□□□□ 0.05
LINC01561-201ENST00000369071 G2E3Q7L622 706 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 TMX3Q96JJ7 454 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
LINC01561-201ENST00000369071 OVOS2A0A0J9YW53 1432 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 OVOS2Q6IE36 1432 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 TUBGCP6Q96RT7 1819 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 CCT4P50991 539 aaKnown RBP15.36■□□□□ 0.05
LINC01561-201ENST00000369071 TERF1P54274 439 aa15.36■□□□□ 0.05
LINC01561-201ENST00000369071 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC01561-201ENST00000369071 ZNF500O60304 480 aaPredicted RBP15.35■□□□□ 0.05
LINC01561-201ENST00000369071 NEK4P51957 841 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 CUL4AQ13619 759 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 F6X3S4 739 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 BRD1O95696 1058 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 MCM2P49736 904 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 ESYT1Q9BSJ8 1104 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 MIS18AQ9NYP9 233 aa15.35■□□□□ 0.05
LINC01561-201ENST00000369071 NALCNQ8IZF0 1738 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms