RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 EIF4A2Q14240 407 aaKnown RBP25.08■■□□□ 1.61
CHTOP-202ENST00000368687 ZCRB1Q8TBF4 217 aaKnown RBP25.08■■□□□ 1.61
CHTOP-202ENST00000368687 USHBP1Q8N6Y0 703 aa25.07■■□□□ 1.6
CHTOP-202ENST00000368687 BCL11BQ9C0K0 894 aaPredicted RBP25.07■■□□□ 1.6
CHTOP-202ENST00000368687 EYA1Q99502 592 aa25.06■■□□□ 1.6
CHTOP-202ENST00000368687 NHSQ6T4R5 1651 aa25.06■■□□□ 1.6
CHTOP-202ENST00000368687 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
CHTOP-202ENST00000368687 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
CHTOP-202ENST00000368687 IGSF1Q8N6C5 1336 aa25.05■■□□□ 1.6
CHTOP-202ENST00000368687 PCDH11XQ9BZA7 1347 aa25.05■■□□□ 1.6
CHTOP-202ENST00000368687 PCDH11YQ9BZA8 1340 aa25.05■■□□□ 1.6
CHTOP-202ENST00000368687 MTHFSP49914 203 aa25.04■■□□□ 1.6
CHTOP-202ENST00000368687 PTF1AQ7RTS3 328 aa25.03■■□□□ 1.6
CHTOP-202ENST00000368687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.03■■□□□ 1.6
CHTOP-202ENST00000368687 KAT6BQ8WYB5 2073 aa25.02■■□□□ 1.6
CHTOP-202ENST00000368687 PSDA5PKW4 1024 aaPredicted RBP25.02■■□□□ 1.6
CHTOP-202ENST00000368687 DDX54Q8TDD1 881 aaKnown RBP25.02■■□□□ 1.6
CHTOP-202ENST00000368687 SPG7Q9UQ90 795 aa25.01■■□□□ 1.59
CHTOP-202ENST00000368687 PLSCR1O15162 318 aa24.99■■□□□ 1.59
CHTOP-202ENST00000368687 RREB1Q92766 1687 aa24.97■■□□□ 1.59
CHTOP-202ENST00000368687 IL13P35225 146 aa24.97■■□□□ 1.59
CHTOP-202ENST00000368687 KDRP35968 1356 aa24.96■■□□□ 1.59
CHTOP-202ENST00000368687 DOT1LQ8TEK3 1739 aa24.96■■□□□ 1.59
CHTOP-202ENST00000368687 R3HDM1Q15032 1099 aaKnown RBP24.96■■□□□ 1.59
CHTOP-202ENST00000368687 CFAP53Q96M91 514 aa24.96■■□□□ 1.59
CHTOP-202ENST00000368687 DIAPH1O60610 1272 aaKnown RBP24.95■■□□□ 1.58
CHTOP-202ENST00000368687 CNGB1Q14028 1251 aaPredicted RBP24.94■■□□□ 1.58
CHTOP-202ENST00000368687 BTAF1O14981 1849 aa24.93■■□□□ 1.58
CHTOP-202ENST00000368687 NUP188Q5SRE5 1749 aa24.93■■□□□ 1.58
CHTOP-202ENST00000368687 AMOTQ4VCS5 1084 aa24.93■■□□□ 1.58
CHTOP-202ENST00000368687 COL3A1P02461 1466 aaPredicted RBP24.91■■□□□ 1.58
CHTOP-202ENST00000368687 ACSBG1Q96GR2 724 aa24.91■■□□□ 1.58
CHTOP-202ENST00000368687 KCNQ2O43526 872 aa24.9■■□□□ 1.58
CHTOP-202ENST00000368687 PLEKHO1Q53GL0 409 aaPredicted RBP24.9■■□□□ 1.58
CHTOP-202ENST00000368687 SULT6B1Q6IMI4 303 aa24.9■■□□□ 1.58
CHTOP-202ENST00000368687 IFNL2Q8IZJ0 200 aa24.9■■□□□ 1.58
CHTOP-202ENST00000368687 CYP27B1O15528 508 aa24.89■■□□□ 1.58
CHTOP-202ENST00000368687 PPP2R1AP30153 589 aa24.89■■□□□ 1.58
CHTOP-202ENST00000368687 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.58
CHTOP-202ENST00000368687 NKX1-1Q15270 411 aaPredicted RBP24.89■■□□□ 1.58
CHTOP-202ENST00000368687 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
CHTOP-202ENST00000368687 RALBP1Q15311 655 aa24.87■■□□□ 1.57
CHTOP-202ENST00000368687 NBPF14Q5TI25 921 aa24.87■■□□□ 1.57
CHTOP-202ENST00000368687 SYTL4Q96C24 671 aaPredicted RBP24.87■■□□□ 1.57
CHTOP-202ENST00000368687 NUDCQ9Y266 331 aa24.87■■□□□ 1.57
CHTOP-202ENST00000368687 PRIM1P49642 420 aaKnown RBP24.86■■□□□ 1.57
CHTOP-202ENST00000368687 PROM2Q8N271 834 aa24.86■■□□□ 1.57
CHTOP-202ENST00000368687 LRP5O75197 1615 aa24.86■■□□□ 1.57
CHTOP-202ENST00000368687 PHKG2P15735 406 aa24.85■■□□□ 1.57
CHTOP-202ENST00000368687 HMGB2P26583 209 aaKnown RBP24.85■■□□□ 1.57
CHTOP-202ENST00000368687 AEBP1Q8IUX7 1158 aa24.85■■□□□ 1.57
CHTOP-202ENST00000368687 C1orf141Q5JVX7 400 aa24.83■■□□□ 1.57
CHTOP-202ENST00000368687 ITGB4P16144 1822 aa24.83■■□□□ 1.57
CHTOP-202ENST00000368687 ANO8Q9HCE9 1232 aaPredicted RBP24.82■■□□□ 1.56
CHTOP-202ENST00000368687 TOGARAM1Q9Y4F4 1720 aa24.82■■□□□ 1.56
CHTOP-202ENST00000368687 U2SURPO15042 1029 aaKnown RBP24.81■■□□□ 1.56
CHTOP-202ENST00000368687 TXNRD1Q16881 649 aa24.81■■□□□ 1.56
CHTOP-202ENST00000368687 SLC27A3Q5K4L6 730 aa24.81■■□□□ 1.56
CHTOP-202ENST00000368687 ZNF530Q6P9A1 599 aaPredicted RBP24.81■■□□□ 1.56
CHTOP-202ENST00000368687 DCAF5Q96JK2 942 aa24.8■■□□□ 1.56
CHTOP-202ENST00000368687 LY75O60449 1722 aa24.8■■□□□ 1.56
CHTOP-202ENST00000368687 HMOX1P09601 288 aa24.79■■□□□ 1.56
CHTOP-202ENST00000368687 ZNF316A6NFI3 1004 aaPredicted RBP24.77■■□□□ 1.56
CHTOP-202ENST00000368687 ERVV-2B6SEH9 535 aa24.77■■□□□ 1.56
CHTOP-202ENST00000368687 SMARCC1Q92922 1105 aaPredicted RBP24.77■■□□□ 1.56
CHTOP-202ENST00000368687 TMOD3Q9NYL9 352 aa24.77■■□□□ 1.56
CHTOP-202ENST00000368687 AKAP4Q5JQC9 854 aa24.76■■□□□ 1.55
CHTOP-202ENST00000368687 MPRIPQ6WCQ1 1025 aa24.76■■□□□ 1.55
CHTOP-202ENST00000368687 MYBBP1AQ9BQG0 1328 aaKnown RBP24.74■■□□□ 1.55
CHTOP-202ENST00000368687 PAPPAQ13219 1627 aa24.73■■□□□ 1.55
CHTOP-202ENST00000368687 SCN11AQ9UI33 1791 aa24.72■■□□□ 1.55
CHTOP-202ENST00000368687 FCHSD2O94868 740 aa24.72■■□□□ 1.55
CHTOP-202ENST00000368687 U2AF1L5P0DN76 240 aaPredicted RBP24.72■■□□□ 1.55
CHTOP-202ENST00000368687 U2AF1Q01081 240 aaKnown RBP eCLIP24.72■■□□□ 1.557e-13■■■■■ 32.8
CHTOP-202ENST00000368687 GAS2L2Q8NHY3 880 aa24.72■■□□□ 1.55
CHTOP-202ENST00000368687 STK32BQ9NY57 414 aa24.72■■□□□ 1.55
CHTOP-202ENST00000368687 PALLDQ8WX93 1383 aa24.71■■□□□ 1.55
CHTOP-202ENST00000368687 PIGBQ92521 554 aa24.71■■□□□ 1.55
CHTOP-202ENST00000368687 KDM6AO15550 1401 aaPredicted RBP24.7■■□□□ 1.55
CHTOP-202ENST00000368687 PDGFDQ9GZP0 370 aaPredicted RBP24.7■■□□□ 1.54
CHTOP-202ENST00000368687 RSPH6AQ9H0K4 717 aa24.69■■□□□ 1.54
CHTOP-202ENST00000368687 PNNQ9H307 717 aaKnown RBP24.69■■□□□ 1.54
CHTOP-202ENST00000368687 CCNL1Q9UK58 526 aaPredicted RBP24.69■■□□□ 1.54
CHTOP-202ENST00000368687 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
CHTOP-202ENST00000368687 NEFMP07197 916 aa24.68■■□□□ 1.54
CHTOP-202ENST00000368687 CABP4P57796 275 aa24.68■■□□□ 1.54
CHTOP-202ENST00000368687 LRRC4BQ9NT99 713 aa24.68■■□□□ 1.54
CHTOP-202ENST00000368687 ADAMTS7Q9UKP4 1686 aa24.67■■□□□ 1.54
CHTOP-202ENST00000368687 PRKAR2BP31323 418 aa24.67■■□□□ 1.54
CHTOP-202ENST00000368687 MTHFSDQ2M296 383 aaKnown RBP24.67■■□□□ 1.54
CHTOP-202ENST00000368687 SLC15A2Q16348 729 aa24.66■■□□□ 1.54
CHTOP-202ENST00000368687 PRKRIP1Q9H875 184 aaPredicted RBP24.66■■□□□ 1.54
CHTOP-202ENST00000368687 CASZ1Q86V15 1759 aa24.66■■□□□ 1.54
CHTOP-202ENST00000368687 QSER1Q2KHR3 1735 aa24.66■■□□□ 1.54
CHTOP-202ENST00000368687 C5P01031 1676 aa24.66■■□□□ 1.54
CHTOP-202ENST00000368687 MRC1P22897 1456 aa24.65■■□□□ 1.54
CHTOP-202ENST00000368687 ZNF831Q5JPB2 1677 aa24.65■■□□□ 1.54
CHTOP-202ENST00000368687 MAP3K5Q99683 1374 aa24.65■■□□□ 1.54
CHTOP-202ENST00000368687 TAF1LQ8IZX4 1826 aa24.63■■□□□ 1.53
CHTOP-202ENST00000368687 GNAT3A8MTJ3 354 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms