RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 HDGFL1Q5TGJ6 251 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 KIF1BO60333 1816 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 WDR63Q8IWG1 891 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 RRP7AQ9Y3A4 280 aaKnown RBP10.18□□□□□ -0.78
SSR2-202ENST00000368311 AKAP17AQ02040 695 aaKnown RBP10.18□□□□□ -0.78
SSR2-202ENST00000368311 CAVIN4Q5BKX8 364 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 SPTY2D1Q68D10 685 aaPredicted RBP10.18□□□□□ -0.78
SSR2-202ENST00000368311 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 UBTFL1P0CB47 393 aaPredicted RBP10.18□□□□□ -0.78
SSR2-202ENST00000368311 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
SSR2-202ENST00000368311 ZGPATQ8N5A5 531 aaKnown RBP10.18□□□□□ -0.78
SSR2-202ENST00000368311 CCNL1Q9UK58 526 aaPredicted RBP10.18□□□□□ -0.78
SSR2-202ENST00000368311 FER1L4A9Z1Z3 1794 aa10.17□□□□□ -0.78
SSR2-202ENST00000368311 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
SSR2-202ENST00000368311 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
SSR2-202ENST00000368311 LDHCP07864 332 aa10.17□□□□□ -0.78
SSR2-202ENST00000368311 LAMC1P11047 1609 aa10.17□□□□□ -0.78
SSR2-202ENST00000368311 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 PARP10Q53GL7 1025 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 HMOX1P09601 288 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 GSTO1P78417 241 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 TRDNQ13061 729 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 PRDM15P57071 1507 aaPredicted RBP10.16□□□□□ -0.78
SSR2-202ENST00000368311 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 TMC4Q7Z404 712 aa10.16□□□□□ -0.78
SSR2-202ENST00000368311 EIF6P56537 245 aaKnown RBP10.15□□□□□ -0.78
SSR2-202ENST00000368311 NBPF1Q3BBV0 1214 aa10.15□□□□□ -0.78
SSR2-202ENST00000368311 NBPF6Q5VWK0 638 aa10.15□□□□□ -0.78
SSR2-202ENST00000368311 NBPF5PQ86XG9 351 aaPredicted RBP10.15□□□□□ -0.78
SSR2-202ENST00000368311 NBPF4Q96M43 638 aa10.15□□□□□ -0.78
SSR2-202ENST00000368311 BCL2L13Q9BXK5 485 aa10.15□□□□□ -0.78
SSR2-202ENST00000368311 IFIT1P09914 478 aaKnown RBP10.15□□□□□ -0.78
SSR2-202ENST00000368311 TRAF1Q13077 416 aa10.15□□□□□ -0.78
SSR2-202ENST00000368311 WASHC4Q2M389 1173 aa10.15□□□□□ -0.78
SSR2-202ENST00000368311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.78
SSR2-202ENST00000368311 INO80Q9ULG1 1556 aaPredicted RBP10.15□□□□□ -0.78
SSR2-202ENST00000368311 OVOS2A0A0G2JMS6 1433 aa10.15□□□□□ -0.79
SSR2-202ENST00000368311 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.79
SSR2-202ENST00000368311 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.79
SSR2-202ENST00000368311 ERVV-2B6SEH9 535 aa10.15□□□□□ -0.79
SSR2-202ENST00000368311 GPR162Q16538 588 aa10.15□□□□□ -0.79
SSR2-202ENST00000368311 CCDC152Q4G0S7 254 aa10.15□□□□□ -0.79
SSR2-202ENST00000368311 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.79
SSR2-202ENST00000368311 RNF20Q5VTR2 975 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 CERS3Q8IU89 383 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 NLGN1Q8N2Q7 840 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 NACAP1Q9BZK3 213 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 IFT57Q9NWB7 429 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 AFF2P51816 1311 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 CDC42BPGQ6DT37 1551 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 ALDH1B1P30837 517 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 CLTCQ00610 1675 aaKnown RBP10.14□□□□□ -0.79
SSR2-202ENST00000368311 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 KIF7Q2M1P5 1343 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 IQGAP3Q86VI3 1631 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 GRIN3BO60391 1043 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 TNNI2P48788 182 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 LTKP29376 864 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 SLC27A3Q5K4L6 730 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 CARD10Q9BWT7 1032 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 ANKRD2Q9GZV1 360 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 IQSEC2Q5JU85 1478 aa10.14□□□□□ -0.79
SSR2-202ENST00000368311 TNS3Q68CZ2 1445 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 WWC2Q6AWC2 1192 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 MARCH6O60337 910 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 SART3Q15020 963 aaKnown RBP10.13□□□□□ -0.79
SSR2-202ENST00000368311 NME9Q86XW9 330 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 SRCIN1Q9C0H9 1055 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 ZNF622Q969S3 477 aaKnown RBP eCLIP10.13□□□□□ -0.79
SSR2-202ENST00000368311 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
SSR2-202ENST00000368311 H0YIN7 160 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
SSR2-202ENST00000368311 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
SSR2-202ENST00000368311 CDC42BPAQ5VT25 1732 aa10.13□□□□□ -0.79
SSR2-202ENST00000368311 AIMP1Q12904 312 aaKnown RBP10.12□□□□□ -0.79
SSR2-202ENST00000368311 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
SSR2-202ENST00000368311 RBM5P52756 815 aaKnown RBP eCLIP10.12□□□□□ -0.79
SSR2-202ENST00000368311 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
SSR2-202ENST00000368311 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
SSR2-202ENST00000368311 CHRNA2Q15822 529 aa10.12□□□□□ -0.79
SSR2-202ENST00000368311 MAST3O60307 1309 aa10.12□□□□□ -0.79
SSR2-202ENST00000368311 SBNO2Q9Y2G9 1366 aa10.12□□□□□ -0.79
SSR2-202ENST00000368311 DHX37Q8IY37 1157 aaKnown RBP10.12□□□□□ -0.79
SSR2-202ENST00000368311 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
SSR2-202ENST00000368311 UNC13BO14795 1591 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 GOLGA6L6A8MZA4 724 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 B4DLN1 442 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 SLC5A1P13866 664 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 MRPL12P52815 198 aaKnown RBP10.11□□□□□ -0.79
SSR2-202ENST00000368311 TTC39AQ5SRH9 613 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 OGFOD1Q8N543 542 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 ANKRD18BA2A2Z9 1011 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 RCAN3Q9UKA8 241 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 ANKIB1Q9P2G1 1089 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
SSR2-202ENST00000368311 PTMSP20962 102 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms