RNA–Protein interactions for RNA: ENST00000367982.8

NR1I3-204, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NR1I3, Length 1,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-204ENST00000367982 COG3Q96JB2 828 aa11.86□□□□□ -0.51
NR1I3-204ENST00000367982 SPON1Q9HCB6 807 aa11.86□□□□□ -0.51
NR1I3-204ENST00000367982 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-204ENST00000367982 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
NR1I3-204ENST00000367982 TMF1P82094 1093 aa11.86□□□□□ -0.51
NR1I3-204ENST00000367982 TXNRD1Q16881 649 aa11.86□□□□□ -0.51
NR1I3-204ENST00000367982 NHSQ6T4R5 1651 aa11.85□□□□□ -0.51
NR1I3-204ENST00000367982 USP47Q96K76 1375 aa11.85□□□□□ -0.51
NR1I3-204ENST00000367982 GOLGB1Q14789 3259 aaKnown RBP11.85□□□□□ -0.51
NR1I3-204ENST00000367982 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
NR1I3-204ENST00000367982 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
NR1I3-204ENST00000367982 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
NR1I3-204ENST00000367982 FYB1O15117 783 aa11.84□□□□□ -0.51
NR1I3-204ENST00000367982 HOXC9P31274 260 aa11.84□□□□□ -0.51
NR1I3-204ENST00000367982 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
NR1I3-204ENST00000367982 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
NR1I3-204ENST00000367982 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
NR1I3-204ENST00000367982 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
NR1I3-204ENST00000367982 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
NR1I3-204ENST00000367982 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
NR1I3-204ENST00000367982 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-204ENST00000367982 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
NR1I3-204ENST00000367982 FBLN1P23142 703 aa11.81□□□□□ -0.52
NR1I3-204ENST00000367982 AMPHP49418 695 aa11.81□□□□□ -0.52
NR1I3-204ENST00000367982 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
NR1I3-204ENST00000367982 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-204ENST00000367982 KIF24Q5T7B8 1368 aa11.8□□□□□ -0.52
NR1I3-204ENST00000367982 PTGER2P43116 358 aa11.8□□□□□ -0.52
NR1I3-204ENST00000367982 MIER1Q8N108 512 aa11.8□□□□□ -0.52
NR1I3-204ENST00000367982 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-204ENST00000367982 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
NR1I3-204ENST00000367982 PAPPAQ13219 1627 aa11.79□□□□□ -0.52
NR1I3-204ENST00000367982 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
NR1I3-204ENST00000367982 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-204ENST00000367982 DDX54Q8TDD1 881 aaKnown RBP11.79□□□□□ -0.52
NR1I3-204ENST00000367982 GGNBP2Q9H3C7 697 aa11.79□□□□□ -0.52
NR1I3-204ENST00000367982 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
NR1I3-204ENST00000367982 BTAF1O14981 1849 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
NR1I3-204ENST00000367982 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 NBPF6Q5VWK0 638 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 NBPF4Q96M43 638 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
NR1I3-204ENST00000367982 MEGF6O75095 1541 aa11.77□□□□□ -0.53
NR1I3-204ENST00000367982 INSRP06213 1382 aa11.77□□□□□ -0.53
NR1I3-204ENST00000367982 ZBTB7AO95365 584 aa11.77□□□□□ -0.53
NR1I3-204ENST00000367982 ZCRB1Q8TBF4 217 aaKnown RBP11.77□□□□□ -0.53
NR1I3-204ENST00000367982 CARD14Q9BXL6 1004 aa11.77□□□□□ -0.53
NR1I3-204ENST00000367982 SMG6Q86US8 1419 aaKnown RBP11.76□□□□□ -0.53
NR1I3-204ENST00000367982 FLT4P35916 1363 aa11.76□□□□□ -0.53
NR1I3-204ENST00000367982 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
NR1I3-204ENST00000367982 NSD2O96028 1365 aa11.75□□□□□ -0.53
NR1I3-204ENST00000367982 PRIM1P49642 420 aaKnown RBP11.75□□□□□ -0.53
NR1I3-204ENST00000367982 HSP90AB2PQ58FF8 381 aa11.75□□□□□ -0.53
NR1I3-204ENST00000367982 MYOM1P52179 1685 aa11.75□□□□□ -0.53
NR1I3-204ENST00000367982 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
NR1I3-204ENST00000367982 ZNF827Q17R98 1081 aa11.74□□□□□ -0.53
NR1I3-204ENST00000367982 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
NR1I3-204ENST00000367982 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
NR1I3-204ENST00000367982 NSD3Q9BZ95 1437 aa11.74□□□□□ -0.53
NR1I3-204ENST00000367982 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-204ENST00000367982 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-204ENST00000367982 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
NR1I3-204ENST00000367982 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
NR1I3-204ENST00000367982 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
NR1I3-204ENST00000367982 LY75O60449 1722 aa11.72□□□□□ -0.53
NR1I3-204ENST00000367982 QSER1Q2KHR3 1735 aa11.72□□□□□ -0.53
NR1I3-204ENST00000367982 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
NR1I3-204ENST00000367982 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
NR1I3-204ENST00000367982 SYT17Q9BSW7 474 aa11.72□□□□□ -0.53
NR1I3-204ENST00000367982 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
NR1I3-204ENST00000367982 WASHC2AQ641Q2 1341 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 PCDH11XQ9BZA7 1347 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 PCDH11YQ9BZA8 1340 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-204ENST00000367982 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 ARXQ96QS3 562 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
NR1I3-204ENST00000367982 ANKRD26Q9UPS8 1709 aa11.71□□□□□ -0.54
NR1I3-204ENST00000367982 PNPLA7Q6ZV29 1317 aa11.7□□□□□ -0.54
NR1I3-204ENST00000367982 YY1P25490 414 aa11.7□□□□□ -0.54
NR1I3-204ENST00000367982 HMGB2P26583 209 aaKnown RBP11.7□□□□□ -0.54
NR1I3-204ENST00000367982 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
NR1I3-204ENST00000367982 CYP27B1O15528 508 aa11.69□□□□□ -0.54
NR1I3-204ENST00000367982 PRR29P0C7W0 189 aa11.68□□□□□ -0.54
NR1I3-204ENST00000367982 ZEB1P37275 1124 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-204ENST00000367982 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-204ENST00000367982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
NR1I3-204ENST00000367982 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
NR1I3-204ENST00000367982 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-204ENST00000367982 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
NR1I3-204ENST00000367982 KCNQ4P56696 695 aa11.67□□□□□ -0.54
NR1I3-204ENST00000367982 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
NR1I3-204ENST00000367982 POLKQ9UBT6 870 aa11.67□□□□□ -0.54
NR1I3-204ENST00000367982 PKD1L3Q7Z443 1732 aa11.67□□□□□ -0.54
NR1I3-204ENST00000367982 PPM1GO15355 546 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-204ENST00000367982 POLD1P28340 1107 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms