RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
LMX1A-203ENST00000367893 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
LMX1A-203ENST00000367893 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
LMX1A-203ENST00000367893 IP6K1Q92551 441 aa17.07■□□□□ 0.32
LMX1A-203ENST00000367893 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
LMX1A-203ENST00000367893 FLT4P35916 1363 aa17.07■□□□□ 0.32
LMX1A-203ENST00000367893 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
LMX1A-203ENST00000367893 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
LMX1A-203ENST00000367893 RGPD3A6NKT7 1758 aaPredicted RBP17.05■□□□□ 0.32
LMX1A-203ENST00000367893 RGPD4Q7Z3J3 1758 aa17.05■□□□□ 0.32
LMX1A-203ENST00000367893 IL2RBP14784 551 aa17.05■□□□□ 0.32
LMX1A-203ENST00000367893 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
LMX1A-203ENST00000367893 KCNQ2O43526 872 aa17.04■□□□□ 0.32
LMX1A-203ENST00000367893 HOXC9P31274 260 aa17.04■□□□□ 0.32
LMX1A-203ENST00000367893 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
LMX1A-203ENST00000367893 PNISRQ8TF01 805 aaKnown RBP17.03■□□□□ 0.32
LMX1A-203ENST00000367893 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.32
LMX1A-203ENST00000367893 AMPHP49418 695 aa17.02■□□□□ 0.32
LMX1A-203ENST00000367893 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
LMX1A-203ENST00000367893 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
LMX1A-203ENST00000367893 TXNRD1Q16881 649 aa17■□□□□ 0.31
LMX1A-203ENST00000367893 IL13P35225 146 aa16.99■□□□□ 0.31
LMX1A-203ENST00000367893 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
LMX1A-203ENST00000367893 ACSBG1Q96GR2 724 aa16.99■□□□□ 0.31
LMX1A-203ENST00000367893 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
LMX1A-203ENST00000367893 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
LMX1A-203ENST00000367893 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
LMX1A-203ENST00000367893 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
LMX1A-203ENST00000367893 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
LMX1A-203ENST00000367893 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
LMX1A-203ENST00000367893 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.3
LMX1A-203ENST00000367893 MEGF6O75095 1541 aa16.95■□□□□ 0.3
LMX1A-203ENST00000367893 CASZ1Q86V15 1759 aa16.95■□□□□ 0.3
LMX1A-203ENST00000367893 NCAPD2Q15021 1401 aa16.94■□□□□ 0.3
LMX1A-203ENST00000367893 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
LMX1A-203ENST00000367893 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
LMX1A-203ENST00000367893 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
LMX1A-203ENST00000367893 ADAMTS8Q9UP79 889 aa16.94■□□□□ 0.3
LMX1A-203ENST00000367893 IGSF1Q8N6C5 1336 aa16.93■□□□□ 0.3
LMX1A-203ENST00000367893 WDR43Q15061 677 aaKnown RBP eCLIP16.93■□□□□ 0.3
LMX1A-203ENST00000367893 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
LMX1A-203ENST00000367893 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
LMX1A-203ENST00000367893 KDRP35968 1356 aa16.92■□□□□ 0.3
LMX1A-203ENST00000367893 FAM9BQ8IZU0 186 aa16.92■□□□□ 0.3
LMX1A-203ENST00000367893 EYA1Q99502 592 aa16.92■□□□□ 0.3
LMX1A-203ENST00000367893 LRRC4BQ9NT99 713 aa16.92■□□□□ 0.3
LMX1A-203ENST00000367893 STK32BQ9NY57 414 aa16.92■□□□□ 0.3
LMX1A-203ENST00000367893 PTGER2P43116 358 aa16.91■□□□□ 0.3
LMX1A-203ENST00000367893 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
LMX1A-203ENST00000367893 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
LMX1A-203ENST00000367893 FCHSD2O94868 740 aa16.9■□□□□ 0.3
LMX1A-203ENST00000367893 ZBTB7AO95365 584 aa16.9■□□□□ 0.3
LMX1A-203ENST00000367893 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
LMX1A-203ENST00000367893 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
LMX1A-203ENST00000367893 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
LMX1A-203ENST00000367893 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
LMX1A-203ENST00000367893 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
LMX1A-203ENST00000367893 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
LMX1A-203ENST00000367893 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
LMX1A-203ENST00000367893 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
LMX1A-203ENST00000367893 BTAF1O14981 1849 aa16.87■□□□□ 0.29
LMX1A-203ENST00000367893 PPP1R1BQ9UD71 204 aaPredicted RBP16.87■□□□□ 0.29
LMX1A-203ENST00000367893 SHANK3Q9BYB0 1731 aa16.86■□□□□ 0.29
LMX1A-203ENST00000367893 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
LMX1A-203ENST00000367893 AEBP1Q8IUX7 1158 aa16.86■□□□□ 0.29
LMX1A-203ENST00000367893 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
LMX1A-203ENST00000367893 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
LMX1A-203ENST00000367893 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
LMX1A-203ENST00000367893 HMOX1P09601 288 aa16.85■□□□□ 0.29
LMX1A-203ENST00000367893 SLC27A3Q5K4L6 730 aa16.85■□□□□ 0.29
LMX1A-203ENST00000367893 MTFR1LQ9H019 292 aa16.85■□□□□ 0.29
LMX1A-203ENST00000367893 UTRNP46939 3433 aa16.85■□□□□ 0.29
LMX1A-203ENST00000367893 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
LMX1A-203ENST00000367893 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
LMX1A-203ENST00000367893 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
LMX1A-203ENST00000367893 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
LMX1A-203ENST00000367893 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
LMX1A-203ENST00000367893 PRKAR2BP31323 418 aa16.82■□□□□ 0.28
LMX1A-203ENST00000367893 KCNQ4P56696 695 aa16.82■□□□□ 0.28
LMX1A-203ENST00000367893 CYP27B1O15528 508 aa16.81■□□□□ 0.28
LMX1A-203ENST00000367893 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
LMX1A-203ENST00000367893 DOT1LQ8TEK3 1739 aa16.81■□□□□ 0.28
LMX1A-203ENST00000367893 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
LMX1A-203ENST00000367893 PCDH11XQ9BZA7 1347 aa16.8■□□□□ 0.28
LMX1A-203ENST00000367893 PCDH11YQ9BZA8 1340 aa16.8■□□□□ 0.28
LMX1A-203ENST00000367893 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
LMX1A-203ENST00000367893 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
LMX1A-203ENST00000367893 DLG5Q8TDM6 1919 aa16.79■□□□□ 0.28
LMX1A-203ENST00000367893 PNPLA7Q6ZV29 1317 aa16.79■□□□□ 0.28
LMX1A-203ENST00000367893 APAF1O14727 1248 aa16.78■□□□□ 0.28
LMX1A-203ENST00000367893 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
LMX1A-203ENST00000367893 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
LMX1A-203ENST00000367893 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
LMX1A-203ENST00000367893 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.27
LMX1A-203ENST00000367893 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
LMX1A-203ENST00000367893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.27
LMX1A-203ENST00000367893 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
LMX1A-203ENST00000367893 MAP3K5Q99683 1374 aa16.76■□□□□ 0.27
LMX1A-203ENST00000367893 LY75O60449 1722 aa16.76■□□□□ 0.27
LMX1A-203ENST00000367893 NEFMP07197 916 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms