RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
PTPN7-202ENST00000367279 CDC42BPGQ6DT37 1551 aa15.23■□□□□ 0.03
PTPN7-202ENST00000367279 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
PTPN7-202ENST00000367279 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
PTPN7-202ENST00000367279 DLG5Q8TDM6 1919 aa15.22■□□□□ 0.03
PTPN7-202ENST00000367279 SDSP20132 328 aa15.22■□□□□ 0.03
PTPN7-202ENST00000367279 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
PTPN7-202ENST00000367279 AATKQ6ZMQ8 1374 aa15.22■□□□□ 0.03
PTPN7-202ENST00000367279 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.03
PTPN7-202ENST00000367279 MCTP1Q6DN14 999 aa15.21■□□□□ 0.03
PTPN7-202ENST00000367279 DDIT3P35638 169 aa15.21■□□□□ 0.03
PTPN7-202ENST00000367279 G2E3Q7L622 706 aa15.21■□□□□ 0.03
PTPN7-202ENST00000367279 PRKCSHP14314 528 aaPredicted RBP15.21■□□□□ 0.02
PTPN7-202ENST00000367279 AMPHP49418 695 aa15.21■□□□□ 0.02
PTPN7-202ENST00000367279 NOL8Q76FK4 1167 aaKnown RBP15.21■□□□□ 0.02
PTPN7-202ENST00000367279 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.02
PTPN7-202ENST00000367279 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
PTPN7-202ENST00000367279 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
PTPN7-202ENST00000367279 GAS2L3Q86XJ1 694 aa15.2■□□□□ 0.02
PTPN7-202ENST00000367279 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
PTPN7-202ENST00000367279 CHL1O00533 1208 aa15.2■□□□□ 0.02
PTPN7-202ENST00000367279 RABEP1Q15276 862 aa15.2■□□□□ 0.02
PTPN7-202ENST00000367279 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
PTPN7-202ENST00000367279 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
PTPN7-202ENST00000367279 SKOR2Q2VWA4 1001 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-202ENST00000367279 C14orf37Q86TY3 774 aa15.19■□□□□ 0.02
PTPN7-202ENST00000367279 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
PTPN7-202ENST00000367279 DLC1Q96QB1 1528 aa15.19■□□□□ 0.02
PTPN7-202ENST00000367279 HMMRO75330 724 aa15.18■□□□□ 0.02
PTPN7-202ENST00000367279 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
PTPN7-202ENST00000367279 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
PTPN7-202ENST00000367279 USP26Q9BXU7 913 aa15.18■□□□□ 0.02
PTPN7-202ENST00000367279 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
PTPN7-202ENST00000367279 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
PTPN7-202ENST00000367279 ST18O60284 1047 aa15.17■□□□□ 0.02
PTPN7-202ENST00000367279 BAG4O95429 457 aaKnown RBP15.17■□□□□ 0.02
PTPN7-202ENST00000367279 FKBP5Q13451 457 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-202ENST00000367279 ZBTB7CA1YPR0 619 aa15.17■□□□□ 0.02
PTPN7-202ENST00000367279 TRIM6-TRIM34B2RNG4 842 aa15.17■□□□□ 0.02
PTPN7-202ENST00000367279 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
PTPN7-202ENST00000367279 RTL1A6NKG5 1358 aa15.17■□□□□ 0.02
PTPN7-202ENST00000367279 PKP1Q13835 747 aa15.16■□□□□ 0.02
PTPN7-202ENST00000367279 RIMBP3CA6NJZ7 1639 aa15.16■□□□□ 0.02
PTPN7-202ENST00000367279 RIMBP3BA6NNM3 1639 aa15.16■□□□□ 0.02
PTPN7-202ENST00000367279 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
PTPN7-202ENST00000367279 CEBPAP49715 358 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-202ENST00000367279 MAP3K19Q56UN5 1328 aa15.16■□□□□ 0.02
PTPN7-202ENST00000367279 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
PTPN7-202ENST00000367279 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
PTPN7-202ENST00000367279 PTPRCP08575 1304 aa15.15■□□□□ 0.02
PTPN7-202ENST00000367279 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
PTPN7-202ENST00000367279 REC8O95072 547 aa15.15■□□□□ 0.02
PTPN7-202ENST00000367279 PTMSP20962 102 aa15.15■□□□□ 0.02
PTPN7-202ENST00000367279 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
PTPN7-202ENST00000367279 CHAMP1Q96JM3 812 aa15.14■□□□□ 0.01
PTPN7-202ENST00000367279 KNDC1Q76NI1 1749 aa15.14■□□□□ 0.01
PTPN7-202ENST00000367279 ATP10DQ9P241 1426 aa15.14■□□□□ 0.01
PTPN7-202ENST00000367279 TNRQ92752 1358 aa15.13■□□□□ 0.01
PTPN7-202ENST00000367279 ERC2O15083 957 aa15.13■□□□□ 0.01
PTPN7-202ENST00000367279 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-202ENST00000367279 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-202ENST00000367279 GNAI2P04899 355 aa15.13■□□□□ 0.01
PTPN7-202ENST00000367279 NEK4P51957 841 aa15.13■□□□□ 0.01
PTPN7-202ENST00000367279 NUCB2P80303 420 aa15.13■□□□□ 0.01
PTPN7-202ENST00000367279 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
PTPN7-202ENST00000367279 LTKP29376 864 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 NLRP6P59044 892 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 SPATA31D1Q6ZQQ2 1576 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 ESPNB1AK53 854 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 NASPP49321 788 aaPredicted RBP15.12■□□□□ 0.01
PTPN7-202ENST00000367279 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
PTPN7-202ENST00000367279 PDE1AP54750 535 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 KIF24Q5T7B8 1368 aa15.12■□□□□ 0.01
PTPN7-202ENST00000367279 EYA1Q99502 592 aa15.11■□□□□ 0.01
PTPN7-202ENST00000367279 RGS12O14924 1447 aa15.11■□□□□ 0.01
PTPN7-202ENST00000367279 AMOTL2Q9Y2J4 779 aa15.11■□□□□ 0.01
PTPN7-202ENST00000367279 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
PTPN7-202ENST00000367279 SETD1AO15047 1707 aaKnown RBP15.1■□□□□ 0.01
PTPN7-202ENST00000367279 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
PTPN7-202ENST00000367279 USHBP1Q8N6Y0 703 aa15.1■□□□□ 0.01
PTPN7-202ENST00000367279 IL1RAPL2Q9NP60 686 aa15.1■□□□□ 0.01
PTPN7-202ENST00000367279 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
PTPN7-202ENST00000367279 NRXN3Q9Y4C0 1643 aa15.1■□□□□ 0.01
PTPN7-202ENST00000367279 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
PTPN7-202ENST00000367279 FLIIQ13045 1269 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 RBM27Q9P2N5 1060 aaKnown RBP15.09■□□□□ 0.01
PTPN7-202ENST00000367279 TMEM2Q9UHN6 1383 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 EIF2S2P20042 333 aaKnown RBP15.09■□□□□ 0.01
PTPN7-202ENST00000367279 CLCN1P35523 988 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 USP6P35125 1406 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
PTPN7-202ENST00000367279 PLEKHG3A1L390 1219 aa15.08■□□□□ 0
PTPN7-202ENST00000367279 LRRFIP2Q9Y608 721 aaKnown RBP15.08■□□□□ 0
PTPN7-202ENST00000367279 MON2Q7Z3U7 1717 aa15.08■□□□□ 0
PTPN7-202ENST00000367279 CCDC30Q5VVM6 783 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms