RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 SLFN5Q08AF3 891 aa16■□□□□ 0.15
CAPN9-203ENST00000366666 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
CAPN9-203ENST00000366666 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
CAPN9-203ENST00000366666 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
CAPN9-203ENST00000366666 MCM10Q7L590 875 aa15.99■□□□□ 0.15
CAPN9-203ENST00000366666 PDE3BQ13370 1112 aa15.98■□□□□ 0.15
CAPN9-203ENST00000366666 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
CAPN9-203ENST00000366666 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
CAPN9-203ENST00000366666 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
CAPN9-203ENST00000366666 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
CAPN9-203ENST00000366666 TRMT2AQ8IZ69 625 aaKnown RBP15.97■□□□□ 0.15
CAPN9-203ENST00000366666 SLIT2O94813 1529 aa15.97■□□□□ 0.15
CAPN9-203ENST00000366666 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
CAPN9-203ENST00000366666 CRB1P82279 1406 aa15.97■□□□□ 0.15
CAPN9-203ENST00000366666 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
CAPN9-203ENST00000366666 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
CAPN9-203ENST00000366666 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.14
CAPN9-203ENST00000366666 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.14
CAPN9-203ENST00000366666 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
CAPN9-203ENST00000366666 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
CAPN9-203ENST00000366666 SHANK3Q9BYB0 1731 aa15.94■□□□□ 0.14
CAPN9-203ENST00000366666 PARP4Q9UKK3 1724 aaKnown RBP15.94■□□□□ 0.14
CAPN9-203ENST00000366666 ZNF530Q6P9A1 599 aaPredicted RBP15.94■□□□□ 0.14
CAPN9-203ENST00000366666 NGLY1Q96IV0 654 aa15.94■□□□□ 0.14
CAPN9-203ENST00000366666 BCL9LQ86UU0 1499 aa15.94■□□□□ 0.14
CAPN9-203ENST00000366666 E9PSI1 815 aa15.93■□□□□ 0.14
CAPN9-203ENST00000366666 TATP17735 454 aaPredicted RBP15.93■□□□□ 0.14
CAPN9-203ENST00000366666 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
CAPN9-203ENST00000366666 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
CAPN9-203ENST00000366666 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
CAPN9-203ENST00000366666 LAS1LQ9Y4W2 734 aaKnown RBP15.93■□□□□ 0.14
CAPN9-203ENST00000366666 MAP3K5Q99683 1374 aa15.93■□□□□ 0.14
CAPN9-203ENST00000366666 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
CAPN9-203ENST00000366666 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
CAPN9-203ENST00000366666 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
CAPN9-203ENST00000366666 WNK3Q9BYP7 1800 aa15.92■□□□□ 0.14
CAPN9-203ENST00000366666 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
CAPN9-203ENST00000366666 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
CAPN9-203ENST00000366666 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
CAPN9-203ENST00000366666 LMOD3Q0VAK6 560 aa15.91■□□□□ 0.14
CAPN9-203ENST00000366666 AMOTQ4VCS5 1084 aa15.91■□□□□ 0.14
CAPN9-203ENST00000366666 CYP27B1O15528 508 aa15.9■□□□□ 0.14
CAPN9-203ENST00000366666 IL2RBP14784 551 aa15.9■□□□□ 0.14
CAPN9-203ENST00000366666 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
CAPN9-203ENST00000366666 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
CAPN9-203ENST00000366666 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
CAPN9-203ENST00000366666 SPATA31A1Q5TZJ5 1347 aa15.9■□□□□ 0.14
CAPN9-203ENST00000366666 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 AKAP4Q5JQC9 854 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 UNC5CLQ8IV45 518 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 IL16Q14005 1332 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 DISP2A7MBM2 1401 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 MEX3CQ5U5Q3 659 aaKnown RBP15.89■□□□□ 0.13
CAPN9-203ENST00000366666 MBIPQ9NS73 344 aa15.89■□□□□ 0.13
CAPN9-203ENST00000366666 PHKG2P15735 406 aa15.88■□□□□ 0.13
CAPN9-203ENST00000366666 C1orf141Q5JVX7 400 aa15.88■□□□□ 0.13
CAPN9-203ENST00000366666 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
CAPN9-203ENST00000366666 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
CAPN9-203ENST00000366666 SPATA31A5Q5VU36 1347 aa15.88■□□□□ 0.13
CAPN9-203ENST00000366666 SPATA31A7Q8IWB4 1347 aa15.88■□□□□ 0.13
CAPN9-203ENST00000366666 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
CAPN9-203ENST00000366666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
CAPN9-203ENST00000366666 USP21Q9UK80 565 aa15.87■□□□□ 0.13
CAPN9-203ENST00000366666 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
CAPN9-203ENST00000366666 KDM6AO15550 1401 aaPredicted RBP15.87■□□□□ 0.13
CAPN9-203ENST00000366666 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
CAPN9-203ENST00000366666 ZCRB1Q8TBF4 217 aaKnown RBP15.87■□□□□ 0.13
CAPN9-203ENST00000366666 CFAP44Q96MT7 982 aa15.87■□□□□ 0.13
CAPN9-203ENST00000366666 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
CAPN9-203ENST00000366666 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
CAPN9-203ENST00000366666 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
CAPN9-203ENST00000366666 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
CAPN9-203ENST00000366666 AFF2P51816 1311 aa15.86■□□□□ 0.13
CAPN9-203ENST00000366666 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
CAPN9-203ENST00000366666 RNMTO43148 476 aaKnown RBP15.86■□□□□ 0.13
CAPN9-203ENST00000366666 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
CAPN9-203ENST00000366666 RCAN3Q9UKA8 241 aa15.86■□□□□ 0.13
CAPN9-203ENST00000366666 CHL1O00533 1208 aa15.85■□□□□ 0.13
CAPN9-203ENST00000366666 GNAI1P63096 354 aa15.85■□□□□ 0.13
CAPN9-203ENST00000366666 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
CAPN9-203ENST00000366666 IFNL2Q8IZJ0 200 aa15.85■□□□□ 0.13
CAPN9-203ENST00000366666 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
CAPN9-203ENST00000366666 TSPYL6Q8N831 410 aa15.84■□□□□ 0.13
CAPN9-203ENST00000366666 FBXO41Q8TF61 875 aa15.84■□□□□ 0.13
CAPN9-203ENST00000366666 VPS72Q15906 364 aa15.83■□□□□ 0.13
CAPN9-203ENST00000366666 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
CAPN9-203ENST00000366666 PCDH11XQ9BZA7 1347 aa15.83■□□□□ 0.12
CAPN9-203ENST00000366666 PCDH11YQ9BZA8 1340 aa15.83■□□□□ 0.12
CAPN9-203ENST00000366666 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.12
CAPN9-203ENST00000366666 FAM98CQ17RN3 349 aaKnown RBP15.83■□□□□ 0.12
CAPN9-203ENST00000366666 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
CAPN9-203ENST00000366666 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
CAPN9-203ENST00000366666 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
CAPN9-203ENST00000366666 GLI3P10071 1580 aa15.82■□□□□ 0.12
CAPN9-203ENST00000366666 KAT6BQ8WYB5 2073 aa15.82■□□□□ 0.12
CAPN9-203ENST00000366666 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
CAPN9-203ENST00000366666 KCNQ3O43525 872 aa15.81■□□□□ 0.12
CAPN9-203ENST00000366666 BCAR3O75815 825 aa15.81■□□□□ 0.12
CAPN9-203ENST00000366666 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms