RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 SBNO1A3KN83 1393 aa2.22□□□□□ -2.05
SNORD48-201ENST00000364953 ARHGEF10O15013 1369 aa2.22□□□□□ -2.05
SNORD48-201ENST00000364953 TMEM94Q12767 1356 aa2.22□□□□□ -2.05
SNORD48-201ENST00000364953 IBTKQ9P2D0 1353 aaPredicted RBP2.22□□□□□ -2.05
SNORD48-201ENST00000364953 VIRMAQ69YN4 1812 aaKnown RBP2.21□□□□□ -2.05
SNORD48-201ENST00000364953 KIF20BQ96Q89 1820 aa2.21□□□□□ -2.05
SNORD48-201ENST00000364953 TTC21AQ8NDW8 1320 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 IPO8O15397 1037 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 HTATSF1O43719 755 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 CUL4AQ13619 759 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 POLA2Q14181 598 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 TTC22Q5TAA0 569 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 LRP10Q7Z4F1 713 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 ANKARQ7Z5J8 1434 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 RPAP2Q8IXW5 612 aaPredicted RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 KCNB2Q92953 911 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 TNPO1Q92973 898 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 MEIS3Q99687 375 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 API5Q9BZZ5 524 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 LNPKQ9C0E8 428 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 PNNQ9H307 717 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 C1orf115Q9H7X2 142 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 ANO8Q9HCE9 1232 aaPredicted RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 SNRKQ9NRH2 765 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 BABAM1Q9NWV8 329 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 CHMP5Q9NZZ3 219 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 STAP2Q9UGK3 403 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 CIZ1Q9ULV3 898 aaPredicted RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 PIK3C2AO00443 1686 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 RIMS1Q86UR5 1692 aaKnown RBP2.21□□□□□ -2.06
SNORD48-201ENST00000364953 ADAMTS7Q9UKP4 1686 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 NFAT5O94916 1531 aa2.21□□□□□ -2.06
SNORD48-201ENST00000364953 PHRF1Q9P1Y6 1649 aaKnown RBP2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PTPRCP08575 1304 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 ERBB4Q15303 1308 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 USP42Q9H9J4 1324 aaKnown RBP2.2□□□□□ -2.06
SNORD48-201ENST00000364953 KIF13AQ9H1H9 1805 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PNMA6EA0A0J9YXQ4 647 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 TRAK2O60296 914 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 SDSP20132 328 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 HOXC9P31274 260 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 CEBPAP49715 358 aaPredicted RBP2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PDE1AP54750 535 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 ATP8B2P98198 1209 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 CALD1Q05682 793 aaKnown RBP2.2□□□□□ -2.06
SNORD48-201ENST00000364953 ST3GAL1Q11201 340 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 MTX1Q13505 466 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PKP1Q13835 747 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 COL9A3Q14050 684 aaPredicted RBP2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PDIA6Q15084 440 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 SULT6B1Q6IMI4 303 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 ERICH6Q7L0X2 663 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 MCM10Q7L590 875 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 UNC5CLQ8IV45 518 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 ITPRIPQ8IWB1 547 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 FAM43AQ8N2R8 423 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PI4K2BQ8TCG2 481 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 SSH3Q8TE77 659 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 KAZALD1Q96I82 304 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 COG3Q96JB2 828 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PDLIM2Q96JY6 352 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PPP1R9BQ96SB3 815 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PANK2Q9BZ23 570 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 USP44Q9H0E7 712 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 LMBRD1Q9NUN5 540 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PALD1Q9ULE6 856 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 NSFL1CQ9UNZ2 370 aaKnown RBP2.2□□□□□ -2.06
SNORD48-201ENST00000364953 AMOTL2Q9Y2J4 779 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 LMO7Q8WWI1 1683 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 SLIT3O75094 1523 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 FLT4P35916 1363 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 PXDNLA1KZ92 1463 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 CRYBG1Q9Y4K1 1723 aa2.2□□□□□ -2.06
SNORD48-201ENST00000364953 UTYO14607 1347 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 SOS1Q07889 1333 aaPredicted RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 GLI3P10071 1580 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 CAMTA1Q9Y6Y1 1673 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 F6X3S4 739 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 K7ELQ4 463 aaPredicted RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 ELL2O00472 640 aaPredicted RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 EPB41L2O43491 1005 aaKnown RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 KCNQ3O43525 872 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 SMARCA5O60264 1052 aaPredicted RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 CDC45O75419 566 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 BAG4O95429 457 aaKnown RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 BRD1O95696 1058 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 KCNA6P17658 529 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 SSFA2P28290 1259 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 CLCN1P35523 988 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 MFAP1P55081 439 aaKnown RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 ZNF445P59923 1031 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 EIF4A1P60842 406 aaKnown RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 LMOD3Q0VAK6 560 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 BECN1Q14457 450 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 RTL5Q5HYW3 569 aaPredicted RBP2.19□□□□□ -2.06
SNORD48-201ENST00000364953 BEND3Q5T5X7 828 aa2.19□□□□□ -2.06
SNORD48-201ENST00000364953 ANKRD45Q5TZF3 282 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms