RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 ANKARQ7Z5J8 1434 aa30.35■■■□□ 2.45
CROCCP2-201ENST00000362058 SOX12O15370 315 aa30.34■■■□□ 2.45
CROCCP2-201ENST00000362058 KDRP35968 1356 aa30.33■■■□□ 2.45
CROCCP2-201ENST00000362058 RTF1Q92541 710 aaKnown RBP30.32■■■□□ 2.44
CROCCP2-201ENST00000362058 RGS12O14924 1447 aa30.31■■■□□ 2.44
CROCCP2-201ENST00000362058 HSCBQ8IWL3 235 aa30.31■■■□□ 2.44
CROCCP2-201ENST00000362058 AMPHP49418 695 aa30.3■■■□□ 2.44
CROCCP2-201ENST00000362058 USP54Q70EL1 1684 aa30.29■■■□□ 2.44
CROCCP2-201ENST00000362058 EIF5BO60841 1220 aaKnown RBP30.29■■■□□ 2.44
CROCCP2-201ENST00000362058 KRT24Q2M2I5 525 aa30.29■■■□□ 2.44
CROCCP2-201ENST00000362058 DCTPP1Q9H773 170 aa30.29■■■□□ 2.44
CROCCP2-201ENST00000362058 IGSF1Q8N6C5 1336 aa30.28■■■□□ 2.44
CROCCP2-201ENST00000362058 RPAP2Q8IXW5 612 aaPredicted RBP30.28■■■□□ 2.44
CROCCP2-201ENST00000362058 GAS2L2Q8NHY3 880 aa30.28■■■□□ 2.44
CROCCP2-201ENST00000362058 MTHFSDQ2M296 383 aaKnown RBP30.27■■■□□ 2.44
CROCCP2-201ENST00000362058 ANKRD44Q8N8A2 993 aa30.27■■■□□ 2.44
CROCCP2-201ENST00000362058 PLPPR3Q6T4P5 718 aa30.26■■■□□ 2.43
CROCCP2-201ENST00000362058 SNX21Q969T3 373 aa30.25■■■□□ 2.43
CROCCP2-201ENST00000362058 CHMP5Q9NZZ3 219 aa30.25■■■□□ 2.43
CROCCP2-201ENST00000362058 ATP10DQ9P241 1426 aa30.24■■■□□ 2.43
CROCCP2-201ENST00000362058 CEP170BQ9Y4F5 1589 aaPredicted RBP30.24■■■□□ 2.43
CROCCP2-201ENST00000362058 HTATSF1O43719 755 aaKnown RBP30.23■■■□□ 2.43
CROCCP2-201ENST00000362058 EYA1Q99502 592 aa30.23■■■□□ 2.43
CROCCP2-201ENST00000362058 TSPYL4Q9UJ04 414 aa30.23■■■□□ 2.43
CROCCP2-201ENST00000362058 MARF1Q9Y4F3 1742 aaKnown RBP30.23■■■□□ 2.43
CROCCP2-201ENST00000362058 NLRP6P59044 892 aa30.22■■■□□ 2.43
CROCCP2-201ENST00000362058 MSH6P52701 1360 aa30.22■■■□□ 2.43
CROCCP2-201ENST00000362058 TBC1D9Q6ZT07 1266 aa30.22■■■□□ 2.43
CROCCP2-201ENST00000362058 LRRC37A3O60309 1634 aa30.21■■■□□ 2.43
CROCCP2-201ENST00000362058 CDC45O75419 566 aa30.21■■■□□ 2.43
CROCCP2-201ENST00000362058 SLC4A2P04920 1241 aa30.21■■■□□ 2.43
CROCCP2-201ENST00000362058 FOXO3O43524 673 aa30.2■■■□□ 2.43
CROCCP2-201ENST00000362058 SPRYD3Q8NCJ5 442 aa30.2■■■□□ 2.42
CROCCP2-201ENST00000362058 RTL1A6NKG5 1358 aa30.2■■■□□ 2.42
CROCCP2-201ENST00000362058 CEP85Q6P2H3 762 aa30.19■■■□□ 2.42
CROCCP2-201ENST00000362058 CACNA1FO60840 1977 aa30.19■■■□□ 2.42
CROCCP2-201ENST00000362058 PLEKHM2Q8IWE5 1019 aa30.18■■■□□ 2.42
CROCCP2-201ENST00000362058 KCNA6P17658 529 aa30.18■■■□□ 2.42
CROCCP2-201ENST00000362058 NCOA3Q9Y6Q9 1424 aa30.17■■■□□ 2.42
CROCCP2-201ENST00000362058 MIS18AQ9NYP9 233 aa30.17■■■□□ 2.42
CROCCP2-201ENST00000362058 HOXC9P31274 260 aa30.15■■■□□ 2.42
CROCCP2-201ENST00000362058 CCT4P50991 539 aaKnown RBP30.15■■■□□ 2.42
CROCCP2-201ENST00000362058 TTC22Q5TAA0 569 aa30.14■■■□□ 2.42
CROCCP2-201ENST00000362058 HMMRO75330 724 aa30.13■■■□□ 2.41
CROCCP2-201ENST00000362058 GNAT3A8MTJ3 354 aa30.13■■■□□ 2.41
CROCCP2-201ENST00000362058 MEIS3Q99687 375 aa30.13■■■□□ 2.41
CROCCP2-201ENST00000362058 STK31Q9BXU1 1019 aa30.13■■■□□ 2.41
CROCCP2-201ENST00000362058 SOS1Q07889 1333 aaPredicted RBP30.12■■■□□ 2.41
CROCCP2-201ENST00000362058 CHD2O14647 1828 aaKnown RBP30.12■■■□□ 2.41
CROCCP2-201ENST00000362058 FAM208AQ9UK61 1670 aaKnown RBP30.12■■■□□ 2.41
CROCCP2-201ENST00000362058 GSPT1P15170 499 aaKnown RBP30.12■■■□□ 2.41
CROCCP2-201ENST00000362058 NWD1Q149M9 1564 aa30.12■■■□□ 2.41
CROCCP2-201ENST00000362058 ABTB2Q8N961 1025 aa30.12■■■□□ 2.41
CROCCP2-201ENST00000362058 MCM4P33991 863 aa30.11■■■□□ 2.41
CROCCP2-201ENST00000362058 KIF2CQ99661 725 aa30.1■■■□□ 2.41
CROCCP2-201ENST00000362058 BABAM1Q9NWV8 329 aa30.1■■■□□ 2.41
CROCCP2-201ENST00000362058 LTN1O94822 1766 aa30.09■■■□□ 2.41
CROCCP2-201ENST00000362058 MAP3K5Q99683 1374 aa30.09■■■□□ 2.41
CROCCP2-201ENST00000362058 HSP90AB1P08238 724 aaKnown RBP30.08■■■□□ 2.41
CROCCP2-201ENST00000362058 CCDC30Q5VVM6 783 aa30.08■■■□□ 2.41
CROCCP2-201ENST00000362058 CIZ1Q9ULV3 898 aaPredicted RBP30.08■■■□□ 2.41
CROCCP2-201ENST00000362058 G2E3Q7L622 706 aa30.07■■■□□ 2.4
CROCCP2-201ENST00000362058 DDIT3P35638 169 aa30.06■■■□□ 2.4
CROCCP2-201ENST00000362058 NUTM2GQ5VZR2 741 aa30.06■■■□□ 2.4
CROCCP2-201ENST00000362058 SLC4A10Q6U841 1118 aa30.06■■■□□ 2.4
CROCCP2-201ENST00000362058 N4BP2Q86UW6 1770 aaPredicted RBP30.06■■■□□ 2.4
CROCCP2-201ENST00000362058 C16orf71Q8IYS4 520 aaPredicted RBP30.05■■■□□ 2.4
CROCCP2-201ENST00000362058 CASC1Q6TDU7 716 aa30.04■■■□□ 2.4
CROCCP2-201ENST00000362058 IL27Q8NEV9 243 aa30.04■■■□□ 2.4
CROCCP2-201ENST00000362058 PHF8Q9UPP1 1060 aa30.04■■■□□ 2.4
CROCCP2-201ENST00000362058 F6X3S4 739 aa30.03■■■□□ 2.4
CROCCP2-201ENST00000362058 GNAI2P04899 355 aa30.02■■■□□ 2.4
CROCCP2-201ENST00000362058 K7ELQ4 463 aaPredicted RBP30.01■■■□□ 2.4
CROCCP2-201ENST00000362058 TAF7Q15545 349 aaPredicted RBP30.01■■■□□ 2.4
CROCCP2-201ENST00000362058 ZNF142P52746 1687 aaPredicted RBP30.01■■■□□ 2.39
CROCCP2-201ENST00000362058 DDX11L8A8MPP1 907 aa30.01■■■□□ 2.39
CROCCP2-201ENST00000362058 FLIIQ13045 1269 aa30.01■■■□□ 2.39
CROCCP2-201ENST00000362058 ANKLE2Q86XL3 938 aa30.01■■■□□ 2.39
CROCCP2-201ENST00000362058 BRPF3Q9ULD4 1205 aa30■■■□□ 2.39
CROCCP2-201ENST00000362058 GNAI3P08754 354 aa30■■■□□ 2.39
CROCCP2-201ENST00000362058 C14orf37Q86TY3 774 aa30■■■□□ 2.39
CROCCP2-201ENST00000362058 SMARCA5O60264 1052 aaPredicted RBP29.99■■■□□ 2.39
CROCCP2-201ENST00000362058 L1TD1Q5T7N2 865 aaKnown RBP29.99■■■□□ 2.39
CROCCP2-201ENST00000362058 IL17REQ8NFR9 667 aa29.99■■■□□ 2.39
CROCCP2-201ENST00000362058 LTV1Q96GA3 475 aaPredicted RBP29.99■■■□□ 2.39
CROCCP2-201ENST00000362058 HSP90AA1P07900 732 aaKnown RBP29.98■■■□□ 2.39
CROCCP2-201ENST00000362058 FKBP5Q13451 457 aaPredicted RBP29.98■■■□□ 2.39
CROCCP2-201ENST00000362058 OTUD7AQ8TE49 926 aaPredicted RBP29.98■■■□□ 2.39
CROCCP2-201ENST00000362058 PXDNLA1KZ92 1463 aa29.97■■■□□ 2.39
CROCCP2-201ENST00000362058 APBB1O00213 710 aa29.97■■■□□ 2.39
CROCCP2-201ENST00000362058 SDSP20132 328 aa29.97■■■□□ 2.39
CROCCP2-201ENST00000362058 RABEP1Q15276 862 aa29.97■■■□□ 2.39
CROCCP2-201ENST00000362058 IP6K1Q92551 441 aa29.96■■■□□ 2.39
CROCCP2-201ENST00000362058 OSBPL3Q9H4L5 887 aa29.96■■■□□ 2.39
CROCCP2-201ENST00000362058 NFAT5O94916 1531 aa29.96■■■□□ 2.39
CROCCP2-201ENST00000362058 USP26Q9BXU7 913 aa29.95■■■□□ 2.38
CROCCP2-201ENST00000362058 PHRF1Q9P1Y6 1649 aaKnown RBP29.93■■■□□ 2.38
CROCCP2-201ENST00000362058 CD2BP2O95400 341 aaKnown RBP29.93■■■□□ 2.38
CROCCP2-201ENST00000362058 TRAK2O60296 914 aa29.92■■■□□ 2.38
CROCCP2-201ENST00000362058 RAB3GAP1Q15042 981 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms