RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CPLX1O14810 134 aa16.62■□□□□ 0.25
COL6A1-201ENST00000361866 VAMP4O75379 141 aa16.62■□□□□ 0.25
COL6A1-201ENST00000361866 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-201ENST00000361866 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
COL6A1-201ENST00000361866 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
COL6A1-201ENST00000361866 KRT85P78386 507 aa16.62■□□□□ 0.25
COL6A1-201ENST00000361866 RIC3Q7Z5B4 369 aa16.62■□□□□ 0.25
COL6A1-201ENST00000361866 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
COL6A1-201ENST00000361866 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
COL6A1-201ENST00000361866 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
COL6A1-201ENST00000361866 SLC26A8Q96RN1 970 aa16.61■□□□□ 0.25
COL6A1-201ENST00000361866 MRPL50Q8N5N7 158 aaKnown RBP16.6■□□□□ 0.25
COL6A1-201ENST00000361866 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
COL6A1-201ENST00000361866 CKAP2LQ8IYA6 745 aa16.6■□□□□ 0.25
COL6A1-201ENST00000361866 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
COL6A1-201ENST00000361866 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
COL6A1-201ENST00000361866 MAGI2Q86UL8 1455 aa16.6■□□□□ 0.25
COL6A1-201ENST00000361866 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
COL6A1-201ENST00000361866 NUP160Q12769 1436 aa16.6■□□□□ 0.25
COL6A1-201ENST00000361866 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
COL6A1-201ENST00000361866 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 ADCY5O95622 1261 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 PDCP20941 246 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 PSMA5P28066 241 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 RBM25P49756 843 aaKnown RBP16.59■□□□□ 0.25
COL6A1-201ENST00000361866 PLEKHM2Q8IWE5 1019 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
COL6A1-201ENST00000361866 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
COL6A1-201ENST00000361866 IL16Q14005 1332 aa16.58■□□□□ 0.25
COL6A1-201ENST00000361866 FAM177BA6PVY3 158 aa16.58■□□□□ 0.25
COL6A1-201ENST00000361866 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.25
COL6A1-201ENST00000361866 NUP62CLQ9H1M0 184 aa16.58■□□□□ 0.25
COL6A1-201ENST00000361866 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
COL6A1-201ENST00000361866 TFIP11Q9UBB9 837 aaKnown RBP16.58■□□□□ 0.24
COL6A1-201ENST00000361866 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.24
COL6A1-201ENST00000361866 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
COL6A1-201ENST00000361866 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.24
COL6A1-201ENST00000361866 APPP05067 770 aa16.58■□□□□ 0.24
COL6A1-201ENST00000361866 TRMT2AQ8IZ69 625 aaKnown RBP16.58■□□□□ 0.24
COL6A1-201ENST00000361866 PDCL2Q8N4E4 241 aa16.58■□□□□ 0.24
COL6A1-201ENST00000361866 KINO60870 393 aaKnown RBP16.57■□□□□ 0.24
COL6A1-201ENST00000361866 AACSQ86V21 672 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 CCDC112Q8NEF3 446 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 SPATA32Q96LK8 384 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 PPFIA3O75145 1194 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
COL6A1-201ENST00000361866 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 SMC2O95347 1197 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 PDE1AP54750 535 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 CCDC183Q5T5S1 534 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 USP19O94966 1318 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 PSME1Q06323 249 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
COL6A1-201ENST00000361866 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-201ENST00000361866 KDM5CP41229 1560 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 C16orf45Q96MC5 204 aaPredicted RBP16.55■□□□□ 0.24
COL6A1-201ENST00000361866 TPM3P06753 285 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 PKP1Q13835 747 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
COL6A1-201ENST00000361866 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 OFD1O75665 1012 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 ANXA1P04083 346 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 MNS1Q8NEH6 495 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
COL6A1-201ENST00000361866 FLIIQ13045 1269 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 CNPY2Q9Y2B0 182 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 ME1P48163 572 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
COL6A1-201ENST00000361866 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
COL6A1-201ENST00000361866 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 FAM177A1Q8N128 213 aaPredicted RBP16.53■□□□□ 0.24
COL6A1-201ENST00000361866 KDM5BQ9UGL1 1544 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 RASSF8Q8NHQ8 419 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 ITSN2Q9NZM3 1697 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 STX6O43752 255 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 ATP2B1P20020 1258 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 BOLA2Q9H3K6 86 aa16.53■□□□□ 0.24
COL6A1-201ENST00000361866 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
COL6A1-201ENST00000361866 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms