RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
LDB3-202ENST00000361373 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
LDB3-202ENST00000361373 IL16Q14005 1332 aa16.04■□□□□ 0.16
LDB3-202ENST00000361373 GLRX3O76003 335 aaKnown RBP16.04■□□□□ 0.16
LDB3-202ENST00000361373 CDKL5O76039 1030 aa16.04■□□□□ 0.16
LDB3-202ENST00000361373 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
LDB3-202ENST00000361373 ZPR1O75312 459 aa16.04■□□□□ 0.16
LDB3-202ENST00000361373 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
LDB3-202ENST00000361373 PTPRCP08575 1304 aa16.04■□□□□ 0.16
LDB3-202ENST00000361373 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
LDB3-202ENST00000361373 RARSP54136 660 aaKnown RBP16.04■□□□□ 0.16
LDB3-202ENST00000361373 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
LDB3-202ENST00000361373 FKBP4Q02790 459 aaKnown RBP eCLIP16.03■□□□□ 0.16
LDB3-202ENST00000361373 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
LDB3-202ENST00000361373 NKTRP30414 1462 aaKnown RBP16.03■□□□□ 0.16
LDB3-202ENST00000361373 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
LDB3-202ENST00000361373 BLOC1S2Q6QNY1 142 aa16.03■□□□□ 0.16
LDB3-202ENST00000361373 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
LDB3-202ENST00000361373 FOSBP53539 338 aa16.03■□□□□ 0.16
LDB3-202ENST00000361373 NPHP3Q7Z494 1330 aa16.03■□□□□ 0.16
LDB3-202ENST00000361373 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
LDB3-202ENST00000361373 SSH1Q8WYL5 1049 aa16.02■□□□□ 0.16
LDB3-202ENST00000361373 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
LDB3-202ENST00000361373 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.16
LDB3-202ENST00000361373 KIAA0556O60303 1618 aa16.02■□□□□ 0.15
LDB3-202ENST00000361373 CCDC69A6NI79 296 aa16.02■□□□□ 0.15
LDB3-202ENST00000361373 DNAAF4Q8WXU2 420 aa16.02■□□□□ 0.15
LDB3-202ENST00000361373 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.15
LDB3-202ENST00000361373 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
LDB3-202ENST00000361373 ZNF287Q9HBT7 754 aa16.01■□□□□ 0.15
LDB3-202ENST00000361373 METTL24Q5JXM2 366 aa16.01■□□□□ 0.15
LDB3-202ENST00000361373 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
LDB3-202ENST00000361373 LRP2BPQ9P2M1 347 aa16.01■□□□□ 0.15
LDB3-202ENST00000361373 STK38Q15208 465 aa16.01■□□□□ 0.15
LDB3-202ENST00000361373 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
LDB3-202ENST00000361373 CDK5RAP3Q96JB5 506 aa16■□□□□ 0.15
LDB3-202ENST00000361373 RAI14Q9P0K7 980 aa16■□□□□ 0.15
LDB3-202ENST00000361373 MTMR7Q9Y216 660 aa16■□□□□ 0.15
LDB3-202ENST00000361373 GPS2Q13227 327 aa16■□□□□ 0.15
LDB3-202ENST00000361373 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
LDB3-202ENST00000361373 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
LDB3-202ENST00000361373 TDO2P48775 406 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 BACH2Q9BYV9 841 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 TMOD2Q9NZR1 351 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
LDB3-202ENST00000361373 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 PPP1R1BQ9UD71 204 aaPredicted RBP15.99■□□□□ 0.15
LDB3-202ENST00000361373 RALGAPBQ86X10 1494 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
LDB3-202ENST00000361373 IFIT5Q13325 482 aaKnown RBP15.98■□□□□ 0.15
LDB3-202ENST00000361373 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
LDB3-202ENST00000361373 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
LDB3-202ENST00000361373 WASF1Q92558 559 aa15.98■□□□□ 0.15
LDB3-202ENST00000361373 TOM1O60784 492 aa15.98■□□□□ 0.15
LDB3-202ENST00000361373 MYD88Q99836 296 aa15.98■□□□□ 0.15
LDB3-202ENST00000361373 NOL7Q9UMY1 257 aaKnown RBP15.98■□□□□ 0.15
LDB3-202ENST00000361373 ABCC2Q92887 1545 aa15.98■□□□□ 0.15
LDB3-202ENST00000361373 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
LDB3-202ENST00000361373 MX1P20591 662 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 DHX8Q14562 1220 aaKnown RBP15.97■□□□□ 0.15
LDB3-202ENST00000361373 HOMER1Q86YM7 354 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
LDB3-202ENST00000361373 TRAPPC8Q9Y2L5 1435 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.97■□□□□ 0.15
LDB3-202ENST00000361373 EPS15P42566 896 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 IMMTQ16891 758 aaKnown RBP15.97■□□□□ 0.15
LDB3-202ENST00000361373 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 MRE11P49959 708 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
LDB3-202ENST00000361373 CCAR2Q8N163 923 aaKnown RBP15.96■□□□□ 0.15
LDB3-202ENST00000361373 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
LDB3-202ENST00000361373 NFKBIBQ15653 356 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 OFD1O75665 1012 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 IDH1O75874 414 aaKnown RBP15.96■□□□□ 0.15
LDB3-202ENST00000361373 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.15
LDB3-202ENST00000361373 PDE4CQ08493 712 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 EXOC6BQ9Y2D4 811 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 KRT85P78386 507 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 FLIIQ13045 1269 aa15.96■□□□□ 0.15
LDB3-202ENST00000361373 A0A087WZG4 1122 aa15.96■□□□□ 0.14
LDB3-202ENST00000361373 FILIP1LQ4L180 1135 aa15.96■□□□□ 0.14
LDB3-202ENST00000361373 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.14
LDB3-202ENST00000361373 PDRG1Q9NUG6 133 aa15.96■□□□□ 0.14
LDB3-202ENST00000361373 ATP2B2Q01814 1243 aa15.95■□□□□ 0.14
LDB3-202ENST00000361373 WDR62O43379 1518 aa15.95■□□□□ 0.14
LDB3-202ENST00000361373 TRMT112Q9UI30 125 aaKnown RBP15.95■□□□□ 0.14
LDB3-202ENST00000361373 CWC27Q6UX04 472 aaKnown RBP15.95■□□□□ 0.14
LDB3-202ENST00000361373 SNRPA1P09661 255 aaKnown RBP15.94■□□□□ 0.14
LDB3-202ENST00000361373 PRM3Q9NNZ6 103 aa15.94■□□□□ 0.14
LDB3-202ENST00000361373 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
LDB3-202ENST00000361373 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms