RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
TOP1-201ENST00000361337 TMPOP42166 694 aaKnown RBP11.29□□□□□ -0.6
TOP1-201ENST00000361337 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
TOP1-201ENST00000361337 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
TOP1-201ENST00000361337 NCOA3Q9Y6Q9 1424 aa11.28□□□□□ -0.6
TOP1-201ENST00000361337 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
TOP1-201ENST00000361337 DDX19BQ9UMR2 479 aa11.28□□□□□ -0.6
TOP1-201ENST00000361337 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
TOP1-201ENST00000361337 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.6
TOP1-201ENST00000361337 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
TOP1-201ENST00000361337 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
TOP1-201ENST00000361337 HSP90AB1P08238 724 aaKnown RBP11.27□□□□□ -0.61
TOP1-201ENST00000361337 NUCB1Q02818 461 aa11.27□□□□□ -0.61
TOP1-201ENST00000361337 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
TOP1-201ENST00000361337 C3P01024 1663 aa11.26□□□□□ -0.61
TOP1-201ENST00000361337 CPS1P31327 1500 aa11.26□□□□□ -0.61
TOP1-201ENST00000361337 ADAMTS2O95450 1211 aa11.26□□□□□ -0.61
TOP1-201ENST00000361337 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
TOP1-201ENST00000361337 SSFA2P28290 1259 aa11.25□□□□□ -0.61
TOP1-201ENST00000361337 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
TOP1-201ENST00000361337 CHD1LQ86WJ1 897 aa11.25□□□□□ -0.61
TOP1-201ENST00000361337 FAM83GA6ND36 823 aa11.25□□□□□ -0.61
TOP1-201ENST00000361337 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
TOP1-201ENST00000361337 YTHDC2Q9H6S0 1430 aaKnown RBP11.25□□□□□ -0.61
TOP1-201ENST00000361337 ATAD2Q6PL18 1390 aa11.25□□□□□ -0.61
TOP1-201ENST00000361337 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 KAT6BQ8WYB5 2073 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 SNX21Q969T3 373 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 MCM10Q7L590 875 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 MPNDQ8N594 471 aa11.24□□□□□ -0.61
TOP1-201ENST00000361337 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
TOP1-201ENST00000361337 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
TOP1-201ENST00000361337 PRDM11Q9NQV5 511 aa11.23□□□□□ -0.61
TOP1-201ENST00000361337 CAMTA1Q9Y6Y1 1673 aa11.23□□□□□ -0.61
TOP1-201ENST00000361337 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
TOP1-201ENST00000361337 SIRT2Q8IXJ6 389 aa11.22□□□□□ -0.61
TOP1-201ENST00000361337 A0A1W2PP64 1363 aa11.22□□□□□ -0.61
TOP1-201ENST00000361337 PPIP5K1Q6PFW1 1433 aa11.22□□□□□ -0.61
TOP1-201ENST00000361337 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 TEFQ10587 303 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 TSPYL6Q8N831 410 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 TULP4Q9NRJ4 1543 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.61
TOP1-201ENST00000361337 PKP1Q13835 747 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 CHAMP1Q96JM3 812 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 TBX22Q9Y458 520 aa11.21□□□□□ -0.61
TOP1-201ENST00000361337 ADAMTSL3P82987 1691 aa11.21□□□□□ -0.62
TOP1-201ENST00000361337 GOLGA6L22H0YM25 854 aa11.21□□□□□ -0.62
TOP1-201ENST00000361337 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.62
TOP1-201ENST00000361337 KIAA1211Q6ZU35 1233 aa11.21□□□□□ -0.62
TOP1-201ENST00000361337 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.62
TOP1-201ENST00000361337 GBP4Q96PP9 640 aa11.21□□□□□ -0.62
TOP1-201ENST00000361337 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
TOP1-201ENST00000361337 K7ELQ4 463 aaPredicted RBP11.2□□□□□ -0.62
TOP1-201ENST00000361337 ZBTB7BO15156 539 aaPredicted RBP11.2□□□□□ -0.62
TOP1-201ENST00000361337 TTC21BQ7Z4L5 1316 aa11.2□□□□□ -0.62
TOP1-201ENST00000361337 POLKQ9UBT6 870 aa11.2□□□□□ -0.62
TOP1-201ENST00000361337 TOM1L2Q6ZVM7 507 aa11.19□□□□□ -0.62
TOP1-201ENST00000361337 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
TOP1-201ENST00000361337 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
TOP1-201ENST00000361337 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
TOP1-201ENST00000361337 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
TOP1-201ENST00000361337 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
TOP1-201ENST00000361337 GSPT1P15170 499 aaKnown RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 NASPP49321 788 aaPredicted RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 KIF16BQ96L93 1317 aa11.18□□□□□ -0.62
TOP1-201ENST00000361337 FMN2Q9NZ56 1722 aa11.18□□□□□ -0.62
TOP1-201ENST00000361337 AIMP1Q12904 312 aaKnown RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
TOP1-201ENST00000361337 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
TOP1-201ENST00000361337 ROBO2Q9HCK4 1378 aa11.18□□□□□ -0.62
TOP1-201ENST00000361337 BAG4O95429 457 aaKnown RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 DDX49Q9Y6V7 483 aaKnown RBP11.18□□□□□ -0.62
TOP1-201ENST00000361337 MED14O60244 1454 aa11.18□□□□□ -0.62
TOP1-201ENST00000361337 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
TOP1-201ENST00000361337 C16orf71Q8IYS4 520 aaPredicted RBP11.17□□□□□ -0.62
TOP1-201ENST00000361337 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
TOP1-201ENST00000361337 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
TOP1-201ENST00000361337 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
TOP1-201ENST00000361337 PRR36Q9H6K5 1346 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 ZNF335Q9H4Z2 1342 aaPredicted RBP11.16□□□□□ -0.62
TOP1-201ENST00000361337 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 VAMP4O75379 141 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 KRT24Q2M2I5 525 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 CAVIN1Q6NZI2 390 aaKnown RBP11.16□□□□□ -0.62
TOP1-201ENST00000361337 MPRIPQ6WCQ1 1025 aa11.16□□□□□ -0.62
TOP1-201ENST00000361337 PTPRMP28827 1452 aa11.15□□□□□ -0.62
TOP1-201ENST00000361337 IL16Q14005 1332 aa11.15□□□□□ -0.62
TOP1-201ENST00000361337 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.62
TOP1-201ENST00000361337 FOXD4L6Q3SYB3 417 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms