RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
UBAP1-202ENST00000359544 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
UBAP1-202ENST00000359544 NUCB2P80303 420 aa18.4■□□□□ 0.54
UBAP1-202ENST00000359544 ZSCAN23Q3MJ62 389 aa18.4■□□□□ 0.54
UBAP1-202ENST00000359544 SASS6Q6UVJ0 657 aa18.4■□□□□ 0.54
UBAP1-202ENST00000359544 NSD3Q9BZ95 1437 aa18.4■□□□□ 0.54
UBAP1-202ENST00000359544 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
UBAP1-202ENST00000359544 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
UBAP1-202ENST00000359544 DLC1Q96QB1 1528 aa18.39■□□□□ 0.54
UBAP1-202ENST00000359544 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
UBAP1-202ENST00000359544 CD2BP2O95400 341 aaKnown RBP18.39■□□□□ 0.53
UBAP1-202ENST00000359544 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
UBAP1-202ENST00000359544 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.39■□□□□ 0.53
UBAP1-202ENST00000359544 LNPKQ9C0E8 428 aa18.39■□□□□ 0.53
UBAP1-202ENST00000359544 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.53
UBAP1-202ENST00000359544 FOXO3O43524 673 aa18.38■□□□□ 0.53
UBAP1-202ENST00000359544 CAVIN1Q6NZI2 390 aaKnown RBP18.38■□□□□ 0.53
UBAP1-202ENST00000359544 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
UBAP1-202ENST00000359544 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
UBAP1-202ENST00000359544 NCLP19338 710 aaKnown RBP18.37■□□□□ 0.53
UBAP1-202ENST00000359544 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
UBAP1-202ENST00000359544 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
UBAP1-202ENST00000359544 PRR36Q9H6K5 1346 aa18.36■□□□□ 0.53
UBAP1-202ENST00000359544 CDC42BPGQ6DT37 1551 aa18.36■□□□□ 0.53
UBAP1-202ENST00000359544 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
UBAP1-202ENST00000359544 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
UBAP1-202ENST00000359544 UTP14CQ5TAP6 766 aaKnown RBP18.35■□□□□ 0.53
UBAP1-202ENST00000359544 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
UBAP1-202ENST00000359544 SSH1Q8WYL5 1049 aa18.35■□□□□ 0.53
UBAP1-202ENST00000359544 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
UBAP1-202ENST00000359544 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
UBAP1-202ENST00000359544 LMBRD1Q9NUN5 540 aa18.35■□□□□ 0.53
UBAP1-202ENST00000359544 CFAP44Q96MT7 982 aa18.34■□□□□ 0.53
UBAP1-202ENST00000359544 NOB1Q9ULX3 412 aaKnown RBP18.34■□□□□ 0.53
UBAP1-202ENST00000359544 TNNT2P45379 298 aaPredicted RBP18.34■□□□□ 0.53
UBAP1-202ENST00000359544 TBC1D9Q6ZT07 1266 aa18.34■□□□□ 0.53
UBAP1-202ENST00000359544 GCC1Q96CN9 775 aa18.34■□□□□ 0.53
UBAP1-202ENST00000359544 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
UBAP1-202ENST00000359544 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
UBAP1-202ENST00000359544 PHLPP1O60346 1717 aa18.34■□□□□ 0.53
UBAP1-202ENST00000359544 MTHFSP49914 203 aa18.33■□□□□ 0.53
UBAP1-202ENST00000359544 RABEP1Q15276 862 aa18.33■□□□□ 0.53
UBAP1-202ENST00000359544 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.53
UBAP1-202ENST00000359544 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
UBAP1-202ENST00000359544 CHMP4BQ9H444 224 aaKnown RBP18.32■□□□□ 0.52
UBAP1-202ENST00000359544 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
UBAP1-202ENST00000359544 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
UBAP1-202ENST00000359544 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
UBAP1-202ENST00000359544 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
UBAP1-202ENST00000359544 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
UBAP1-202ENST00000359544 IL16Q14005 1332 aa18.31■□□□□ 0.52
UBAP1-202ENST00000359544 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
UBAP1-202ENST00000359544 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
UBAP1-202ENST00000359544 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
UBAP1-202ENST00000359544 CDC45O75419 566 aa18.3■□□□□ 0.52
UBAP1-202ENST00000359544 DMTNQ08495 405 aa18.3■□□□□ 0.52
UBAP1-202ENST00000359544 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
UBAP1-202ENST00000359544 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
UBAP1-202ENST00000359544 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
UBAP1-202ENST00000359544 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
UBAP1-202ENST00000359544 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
UBAP1-202ENST00000359544 ANKRD45Q5TZF3 282 aa18.29■□□□□ 0.52
UBAP1-202ENST00000359544 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
UBAP1-202ENST00000359544 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
UBAP1-202ENST00000359544 QRICH2Q9H0J4 1663 aa18.28■□□□□ 0.52
UBAP1-202ENST00000359544 NSD2O96028 1365 aa18.28■□□□□ 0.52
UBAP1-202ENST00000359544 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
UBAP1-202ENST00000359544 KIAA2012Q0VF49 1180 aa18.27■□□□□ 0.52
UBAP1-202ENST00000359544 AHDC1Q5TGY3 1603 aaPredicted RBP18.26■□□□□ 0.51
UBAP1-202ENST00000359544 MYRIPQ8NFW9 859 aa18.26■□□□□ 0.51
UBAP1-202ENST00000359544 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
UBAP1-202ENST00000359544 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
UBAP1-202ENST00000359544 TULP4Q9NRJ4 1543 aa18.25■□□□□ 0.51
UBAP1-202ENST00000359544 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
UBAP1-202ENST00000359544 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
UBAP1-202ENST00000359544 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
UBAP1-202ENST00000359544 PRIMPOLQ96LW4 560 aa18.25■□□□□ 0.51
UBAP1-202ENST00000359544 NHSL1Q5SYE7 1610 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 TMPOP42166 694 aaKnown RBP18.24■□□□□ 0.51
UBAP1-202ENST00000359544 ARID3AQ99856 593 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 SOS2Q07890 1332 aaPredicted RBP18.24■□□□□ 0.51
UBAP1-202ENST00000359544 MBD3O95983 291 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 HMGN5P82970 282 aaKnown RBP18.24■□□□□ 0.51
UBAP1-202ENST00000359544 PSME1Q06323 249 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
UBAP1-202ENST00000359544 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 ATP7BP35670 1465 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 NPHP3Q7Z494 1330 aa18.24■□□□□ 0.51
UBAP1-202ENST00000359544 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
UBAP1-202ENST00000359544 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
UBAP1-202ENST00000359544 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
UBAP1-202ENST00000359544 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
UBAP1-202ENST00000359544 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
UBAP1-202ENST00000359544 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
UBAP1-202ENST00000359544 GTPBP4Q9BZE4 634 aaKnown RBP18.22■□□□□ 0.51
UBAP1-202ENST00000359544 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
UBAP1-202ENST00000359544 JCADQ9P266 1359 aa18.22■□□□□ 0.51
UBAP1-202ENST00000359544 ZSCAN20P17040 1043 aaPredicted RBP18.22■□□□□ 0.51
UBAP1-202ENST00000359544 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms