RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RIC3Q7Z5B4 369 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 TTC5Q8N0Z6 440 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 TTC21BQ7Z4L5 1316 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 UNC13BO14795 1591 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 HSP90AB4PQ58FF6 505 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 NUTM1Q86Y26 1132 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 RAPGEF4Q8WZA2 1011 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 PHF14O94880 888 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
COL20A1-201ENST00000358894 FOXO3O43524 673 aa14.84□□□□□ -0.03
COL20A1-201ENST00000358894 CNTROBQ8N137 903 aa14.83□□□□□ -0.03
COL20A1-201ENST00000358894 ZBTB7BO15156 539 aaPredicted RBP14.83□□□□□ -0.04
COL20A1-201ENST00000358894 CLTCL1P53675 1640 aa14.83□□□□□ -0.04
COL20A1-201ENST00000358894 TAF7LQ5H9L4 462 aa14.83□□□□□ -0.04
COL20A1-201ENST00000358894 FLIIQ13045 1269 aa14.82□□□□□ -0.04
COL20A1-201ENST00000358894 PLEKHO1Q53GL0 409 aaPredicted RBP14.82□□□□□ -0.04
COL20A1-201ENST00000358894 LRRFIP2Q9Y608 721 aaKnown RBP14.82□□□□□ -0.04
COL20A1-201ENST00000358894 MX1P20591 662 aa14.82□□□□□ -0.04
COL20A1-201ENST00000358894 ATP6V1DQ9Y5K8 247 aa14.82□□□□□ -0.04
COL20A1-201ENST00000358894 MYOM2P54296 1465 aa14.82□□□□□ -0.04
COL20A1-201ENST00000358894 TTC22Q5TAA0 569 aa14.81□□□□□ -0.04
COL20A1-201ENST00000358894 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
COL20A1-201ENST00000358894 SIL1Q9H173 461 aa14.81□□□□□ -0.04
COL20A1-201ENST00000358894 IL13P35225 146 aa14.81□□□□□ -0.04
COL20A1-201ENST00000358894 CSPP1Q1MSJ5 1256 aa14.81□□□□□ -0.04
COL20A1-201ENST00000358894 YEATS2Q9ULM3 1422 aa14.81□□□□□ -0.04
COL20A1-201ENST00000358894 SDSP20132 328 aa14.8□□□□□ -0.04
COL20A1-201ENST00000358894 CWC22Q9HCG8 908 aaKnown RBP14.8□□□□□ -0.04
COL20A1-201ENST00000358894 PTPRCP08575 1304 aa14.8□□□□□ -0.04
COL20A1-201ENST00000358894 CWC27Q6UX04 472 aaKnown RBP14.8□□□□□ -0.04
COL20A1-201ENST00000358894 ANXA1P04083 346 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-201ENST00000358894 ANKRD44Q8N8A2 993 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 ZFYVE9O95405 1425 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-201ENST00000358894 BTBD11A6QL63 1104 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 TPM2P07951 284 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 MCM2P49736 904 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 PANK2Q9BZ23 570 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-201ENST00000358894 TNRQ92752 1358 aa14.79□□□□□ -0.04
COL20A1-201ENST00000358894 H3BQV1 296 aa14.78□□□□□ -0.04
COL20A1-201ENST00000358894 MTHFSDQ2M296 383 aaKnown RBP14.78□□□□□ -0.04
COL20A1-201ENST00000358894 IFFO2Q5TF58 517 aa14.78□□□□□ -0.04
COL20A1-201ENST00000358894 ESPNB1AK53 854 aa14.78□□□□□ -0.04
COL20A1-201ENST00000358894 FIBPO43427 364 aa14.78□□□□□ -0.04
COL20A1-201ENST00000358894 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
COL20A1-201ENST00000358894 MPNDQ8N594 471 aa14.78□□□□□ -0.04
COL20A1-201ENST00000358894 OTUD7AQ8TE49 926 aaPredicted RBP14.78□□□□□ -0.04
COL20A1-201ENST00000358894 MYL6BP14649 208 aa14.77□□□□□ -0.04
COL20A1-201ENST00000358894 FAM184AQ8NB25 1140 aa14.77□□□□□ -0.04
COL20A1-201ENST00000358894 FOSBP53539 338 aa14.77□□□□□ -0.04
COL20A1-201ENST00000358894 ZC3H6P61129 1189 aaKnown RBP14.77□□□□□ -0.04
COL20A1-201ENST00000358894 MPRIPQ6WCQ1 1025 aa14.77□□□□□ -0.04
COL20A1-201ENST00000358894 TET3O43151 1660 aa14.77□□□□□ -0.04
COL20A1-201ENST00000358894 GNL2Q13823 731 aaKnown RBP14.77□□□□□ -0.05
COL20A1-201ENST00000358894 NEUROD6Q96NK8 337 aa14.77□□□□□ -0.05
COL20A1-201ENST00000358894 MADDQ8WXG6 1647 aa14.77□□□□□ -0.05
COL20A1-201ENST00000358894 KIF1BO60333 1816 aa14.76□□□□□ -0.05
COL20A1-201ENST00000358894 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
COL20A1-201ENST00000358894 RNF20Q5VTR2 975 aa14.76□□□□□ -0.05
COL20A1-201ENST00000358894 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
COL20A1-201ENST00000358894 DCTPP1Q9H773 170 aa14.76□□□□□ -0.05
COL20A1-201ENST00000358894 TNNT3P45378 269 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-201ENST00000358894 PLEKHM2Q8IWE5 1019 aa14.76□□□□□ -0.05
COL20A1-201ENST00000358894 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
COL20A1-201ENST00000358894 MBD3O95983 291 aa14.76□□□□□ -0.05
COL20A1-201ENST00000358894 XRCC6P12956 609 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL20A1-201ENST00000358894 CEP85Q6P2H3 762 aa14.76□□□□□ -0.05
COL20A1-201ENST00000358894 PROSER2Q86WR7 435 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-201ENST00000358894 MAP7D2Q96T17 732 aa14.75□□□□□ -0.05
COL20A1-201ENST00000358894 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.75□□□□□ -0.05
COL20A1-201ENST00000358894 G2E3Q7L622 706 aa14.75□□□□□ -0.05
COL20A1-201ENST00000358894 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
COL20A1-201ENST00000358894 E9PCH4 1651 aa14.75□□□□□ -0.05
COL20A1-201ENST00000358894 PDE4CQ08493 712 aa14.75□□□□□ -0.05
COL20A1-201ENST00000358894 MAP3K19Q56UN5 1328 aa14.75□□□□□ -0.05
COL20A1-201ENST00000358894 BAG4O95429 457 aaKnown RBP14.74□□□□□ -0.05
COL20A1-201ENST00000358894 AACSQ86V21 672 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 ISY1Q9ULR0 285 aaKnown RBP14.74□□□□□ -0.05
COL20A1-201ENST00000358894 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
COL20A1-201ENST00000358894 ANKLE2Q86XL3 938 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 MAP3K4Q9Y6R4 1608 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
COL20A1-201ENST00000358894 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
COL20A1-201ENST00000358894 SHROOM2Q13796 1616 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 PDE1AP54750 535 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 EYA1Q99502 592 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 DNAJC2Q99543 621 aaKnown RBP14.74□□□□□ -0.05
COL20A1-201ENST00000358894 PRDM10Q9NQV6 1147 aa14.74□□□□□ -0.05
COL20A1-201ENST00000358894 EFCAB6Q5THR3 1501 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 ZMYM3Q14202 1370 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 ATF3P18847 181 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 SPHKAPQ2M3C7 1700 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 CCDC173Q0VFZ6 552 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 SNX21Q969T3 373 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 SYCE3A1L190 88 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms